RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HIST1H2BNQ99877 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 HIST1H2BMQ99879 126 aa2.6□□□□□ -1.99
LINC00254-201ENST00000563416 NUPR1O60356 82 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 LEPROTL1O95214 131 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 NDUFA6P56556 154 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 SFTA2Q6UW10 78 aa2.59□□□□□ -1.99
LINC00254-201ENST00000563416 ZNF625Q96I27 306 aaPredicted RBP2.59□□□□□ -1.99
LINC00254-201ENST00000563416 HMCN2Q8NDA2 5059 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 LST1O00453 97 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 TMEM170BQ5T4T1 132 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
LINC00254-201ENST00000563416 ANKRD29Q8N6D5 301 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 PSORS1C2Q9UIG4 136 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 HSPB8Q9UJY1 196 aa2.58□□□□□ -2
LINC00254-201ENST00000563416 A8MUN3 132 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 S100A1P23297 94 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 PLNP26678 52 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 COX17Q14061 63 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 SPINK6Q6UWN8 80 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 ERG28Q9UKR5 140 aa2.57□□□□□ -2
LINC00254-201ENST00000563416 FAM236DA0A1B0GTK5 79 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 DPM2O94777 84 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 IGKCP01834 107 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 MT1HL1P0DM35 61 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 FAM236CP0DP71 79 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 FABP4P15090 132 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 DAND5Q8N907 189 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 C22orf24Q9Y442 160 aa2.56□□□□□ -2
LINC00254-201ENST00000563416 SYS1-DBNDD2H3BUS1 97 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LEPROTO15243 131 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 C1orf137Q5JT78 98 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LINC01545Q5VT33 79 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 Q8NDZ9 215 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LINC01600Q96MT4 127 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 PMCHL2Q9BQD1 86 aa2.55□□□□□ -2
LINC00254-201ENST00000563416 LOC107984156A0A0G2JMH3 177 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 MYMXA0A1B0GTQ4 84 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 A0A1B0GU33 70 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 J3QQQ9 107 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 C3orf79P0CE67 100 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 UBE2BP63146 152 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 ARL17AQ8IVW1 177 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 PLEKHB2Q96CS7 222 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 NDUFA12Q9UI09 145 aa2.54□□□□□ -2
LINC00254-201ENST00000563416 LINC00587B1AMM8 73 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 BCE1O60756 84 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 SMIM13P0DJ93 91 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 LINC00158P58513 81 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 KRTAP13-1Q8IUC0 172 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 DIRC1Q969H9 104 aa2.53□□□□□ -2
LINC00254-201ENST00000563416 IGKV2D-26A0A0A0MRZ7 120 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 LGALS3P17931 250 aaKnown RBP2.52□□□□□ -2.01
LINC00254-201ENST00000563416 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 MEIG1Q5JSS6 88 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 HIST3H2BBQ8N257 126 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 OR13C6PQ8NH95 151 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 R4GN34 69 aa2.52□□□□□ -2.01
LINC00254-201ENST00000563416 TRBV10-2A0A0K0K1G8 114 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 A0A1B0GV72 72 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 M0R378 163 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 TIMM17BO60830 172 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 NDUFC2O95298 119 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 SPRR1AP35321 89 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 RPL28P46779 137 aaKnown RBP2.51□□□□□ -2.01
LINC00254-201ENST00000563416 AKR1D1P51857 326 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 KRTDAPP60985 99 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 HIST1H2BLQ99880 126 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 TMEM126AQ9H061 195 aa2.51□□□□□ -2.01
LINC00254-201ENST00000563416 C20orf202A1L168 122 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 SOSTDC1Q6X4U4 206 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 KCNQ1DNQ9H478 68 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 LPAP08519 4548 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 LRP2P98164 4655 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
LINC00254-201ENST00000563416 TRBV10-3A0A0K0K1G6 114 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 H3BPC8 53 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 NCR3O14931 201 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 PRLHP81277 87 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SMCR5Q8TEV8 140 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 MIEN1Q9BRT3 115 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SPANXDQ9BXN6 97 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 TTTY13Q9BZ97 58 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 SPANXCQ9NY87 97 aa2.49□□□□□ -2.01
LINC00254-201ENST00000563416 IGLV6-57P01721 117 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 KRTAP13-2Q52LG2 175 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 Q6Q795 121 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 ATOH7Q8N100 152 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 SMIM20Q8N5G0 67 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
LINC00254-201ENST00000563416 NPC2P61916 151 aa2.47□□□□□ -2.01
LINC00254-201ENST00000563416 HIST1H4AP62805 103 aaKnown RBP2.47□□□□□ -2.01
LINC00254-201ENST00000563416 Q6ZRX8 168 aa2.47□□□□□ -2.01
LINC00254-201ENST00000563416 TRAV23DV6A0A075B6W5 121 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms