RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 C2CD3Q4AC94 2353 aa2.6□□□□□ -1.99
HMGN2P47-201ENST00000559378 BAHCC1Q9P281 2608 aa2.59□□□□□ -1.99
HMGN2P47-201ENST00000559378 KRTAP12-1P59990 96 aa2.59□□□□□ -1.99
HMGN2P47-201ENST00000559378 SPTBN4Q9H254 2564 aa2.59□□□□□ -1.99
HMGN2P47-201ENST00000559378 MUC6Q6W4X9 2439 aa2.59□□□□□ -2
HMGN2P47-201ENST00000559378 NOTCH3Q9UM47 2321 aa2.58□□□□□ -2
HMGN2P47-201ENST00000559378 GVINP1Q7Z2Y8 2422 aa2.57□□□□□ -2
HMGN2P47-201ENST00000559378 CACNA1HO95180 2353 aa2.57□□□□□ -2
HMGN2P47-201ENST00000559378 MGAQ8IWI9 3026 aa2.56□□□□□ -2
HMGN2P47-201ENST00000559378 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
HMGN2P47-201ENST00000559378 DEFB136Q30KP8 78 aa2.56□□□□□ -2
HMGN2P47-201ENST00000559378 ABCA2Q9BZC7 2435 aa2.56□□□□□ -2
HMGN2P47-201ENST00000559378 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
HMGN2P47-201ENST00000559378 A0A0C4DFX4 3053 aa2.55□□□□□ -2
HMGN2P47-201ENST00000559378 KRTAP10-3P60369 221 aa2.55□□□□□ -2
HMGN2P47-201ENST00000559378 CHD7Q9P2D1 2997 aa2.55□□□□□ -2
HMGN2P47-201ENST00000559378 F8P00451 2351 aa2.53□□□□□ -2
HMGN2P47-201ENST00000559378 TENM2Q9NT68 2774 aa2.51□□□□□ -2.01
HMGN2P47-201ENST00000559378 CD52P31358 61 aa2.51□□□□□ -2.01
HMGN2P47-201ENST00000559378 CEP250Q9BV73 2442 aa2.51□□□□□ -2.01
HMGN2P47-201ENST00000559378 MT3P25713 68 aa2.49□□□□□ -2.01
HMGN2P47-201ENST00000559378 MAP1BP46821 2468 aaKnown RBP2.49□□□□□ -2.01
HMGN2P47-201ENST00000559378 REV3LO60673 3130 aa2.48□□□□□ -2.01
HMGN2P47-201ENST00000559378 CEP290O15078 2479 aa2.48□□□□□ -2.01
HMGN2P47-201ENST00000559378 M0QZ58 72 aa2.48□□□□□ -2.01
HMGN2P47-201ENST00000559378 WDR87Q6ZQQ6 2873 aa2.47□□□□□ -2.01
HMGN2P47-201ENST00000559378 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
HMGN2P47-201ENST00000559378 CCDC168Q8NDH2 2452 aa2.46□□□□□ -2.02
HMGN2P47-201ENST00000559378 NCOR1O75376 2440 aa2.45□□□□□ -2.02
HMGN2P47-201ENST00000559378 Q9Y3F1 56 aa2.45□□□□□ -2.02
HMGN2P47-201ENST00000559378 APC2O95996 2303 aa2.45□□□□□ -2.02
HMGN2P47-201ENST00000559378 ABCA12Q86UK0 2595 aa2.44□□□□□ -2.02
HMGN2P47-201ENST00000559378 A0A096LNI7 61 aa2.44□□□□□ -2.02
HMGN2P47-201ENST00000559378 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
HMGN2P47-201ENST00000559378 CELSR2Q9HCU4 2923 aa2.43□□□□□ -2.02
HMGN2P47-201ENST00000559378 SPINK6Q6UWN8 80 aa2.43□□□□□ -2.02
HMGN2P47-201ENST00000559378 PKD1L2Q7Z442 2459 aa2.43□□□□□ -2.02
HMGN2P47-201ENST00000559378 PRRC2CQ9Y520 2896 aaKnown RBP2.42□□□□□ -2.02
HMGN2P47-201ENST00000559378 UBR5O95071 2799 aaPredicted RBP2.42□□□□□ -2.02
HMGN2P47-201ENST00000559378 EP300Q09472 2414 aaPredicted RBP2.41□□□□□ -2.02
HMGN2P47-201ENST00000559378 OTOGQ6ZRI0 2925 aa2.41□□□□□ -2.02
HMGN2P47-201ENST00000559378 COL6A5A8TX70 2615 aa2.39□□□□□ -2.03
HMGN2P47-201ENST00000559378 CREBBPQ92793 2442 aa2.39□□□□□ -2.03
HMGN2P47-201ENST00000559378 TTC28Q96AY4 2481 aa2.39□□□□□ -2.03
HMGN2P47-201ENST00000559378 KRTAP13-1Q8IUC0 172 aa2.39□□□□□ -2.03
HMGN2P47-201ENST00000559378 NAV2Q8IVL1 2488 aa2.39□□□□□ -2.03
HMGN2P47-201ENST00000559378 A0A096LPF7 62 aa2.38□□□□□ -2.03
HMGN2P47-201ENST00000559378 ASH1LQ9NR48 2969 aaKnown RBP2.38□□□□□ -2.03
HMGN2P47-201ENST00000559378 DEFB124Q8NES8 71 aa2.37□□□□□ -2.03
HMGN2P47-201ENST00000559378 LCE1AQ5T7P2 110 aa2.36□□□□□ -2.03
HMGN2P47-201ENST00000559378 DMBT1Q9UGM3 2413 aaPredicted RBP2.36□□□□□ -2.03
HMGN2P47-201ENST00000559378 CHD6Q8TD26 2715 aa2.35□□□□□ -2.03
HMGN2P47-201ENST00000559378 COL6A3P12111 3177 aa2.35□□□□□ -2.03
HMGN2P47-201ENST00000559378 NBASA2RRP1 2371 aa2.34□□□□□ -2.03
HMGN2P47-201ENST00000559378 TRANK1O15050 2925 aa2.34□□□□□ -2.04
HMGN2P47-201ENST00000559378 SETD2Q9BYW2 2564 aaPredicted RBP2.33□□□□□ -2.04
HMGN2P47-201ENST00000559378 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
HMGN2P47-201ENST00000559378 SRRM2Q9UQ35 2752 aaKnown RBP2.32□□□□□ -2.04
HMGN2P47-201ENST00000559378 FBN1P35555 2871 aaKnown RBP2.32□□□□□ -2.04
HMGN2P47-201ENST00000559378 KRTAP1-5Q9BYS1 174 aa2.32□□□□□ -2.04
HMGN2P47-201ENST00000559378 RP1L1Q8IWN7 2480 aaPredicted RBP2.3□□□□□ -2.04
HMGN2P47-201ENST00000559378 DEFB133Q30KQ1 61 aa2.3□□□□□ -2.04
HMGN2P47-201ENST00000559378 TNRC18O15417 2968 aaPredicted RBP2.3□□□□□ -2.04
HMGN2P47-201ENST00000559378 H3BNG1 76 aa2.29□□□□□ -2.04
HMGN2P47-201ENST00000559378 LINC01556Q5JQF7 62 aa2.29□□□□□ -2.04
HMGN2P47-201ENST00000559378 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
HMGN2P47-201ENST00000559378 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
HMGN2P47-201ENST00000559378 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
HMGN2P47-201ENST00000559378 VWFP04275 2813 aa2.27□□□□□ -2.05
HMGN2P47-201ENST00000559378 VPS13DQ5THJ4 4388 aa2.26□□□□□ -2.05
HMGN2P47-201ENST00000559378 CEP350Q5VT06 3117 aa2.25□□□□□ -2.05
HMGN2P47-201ENST00000559378 MEGF8Q7Z7M0 2845 aa2.25□□□□□ -2.05
HMGN2P47-201ENST00000559378 PTPN13Q12923 2485 aa2.25□□□□□ -2.05
HMGN2P47-201ENST00000559378 HECTD1Q9ULT8 2610 aa2.24□□□□□ -2.05
HMGN2P47-201ENST00000559378 FAM186AA6NE01 2351 aa2.23□□□□□ -2.05
HMGN2P47-201ENST00000559378 CRYBG3Q68DQ2 2970 aa2.23□□□□□ -2.05
HMGN2P47-201ENST00000559378 ZNF292O60281 2723 aa2.23□□□□□ -2.05
HMGN2P47-201ENST00000559378 SPART-AS1P0CW21 52 aa2.23□□□□□ -2.05
HMGN2P47-201ENST00000559378 HIVEP3Q5T1R4 2406 aa2.22□□□□□ -2.05
HMGN2P47-201ENST00000559378 SPG11Q96JI7 2443 aa2.22□□□□□ -2.05
HMGN2P47-201ENST00000559378 TNP1P09430 55 aa2.22□□□□□ -2.05
HMGN2P47-201ENST00000559378 LCE3CQ5T5A8 94 aa2.22□□□□□ -2.05
HMGN2P47-201ENST00000559378 AKAP13Q12802 2813 aa2.21□□□□□ -2.06
HMGN2P47-201ENST00000559378 ITPR1Q14643 2758 aa2.21□□□□□ -2.06
HMGN2P47-201ENST00000559378 RIF1Q5UIP0 2472 aaKnown RBP2.2□□□□□ -2.06
HMGN2P47-201ENST00000559378 KRTAP10-7P60409 375 aaPredicted RBP2.18□□□□□ -2.06
HMGN2P47-201ENST00000559378 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
HMGN2P47-201ENST00000559378 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
HMGN2P47-201ENST00000559378 NCOR2Q9Y618 2525 aa2.18□□□□□ -2.06
HMGN2P47-201ENST00000559378 PIEZO1Q92508 2521 aa2.17□□□□□ -2.06
HMGN2P47-201ENST00000559378 LRRK2Q5S007 2527 aa2.16□□□□□ -2.06
HMGN2P47-201ENST00000559378 SONP18583 2426 aaKnown RBP2.16□□□□□ -2.06
HMGN2P47-201ENST00000559378 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
HMGN2P47-201ENST00000559378 ANKHD1Q8IWZ3 2542 aaKnown RBP2.15□□□□□ -2.07
HMGN2P47-201ENST00000559378 POLQO75417 2590 aa2.15□□□□□ -2.07
HMGN2P47-201ENST00000559378 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.07
HMGN2P47-201ENST00000559378 NBEAQ8NFP9 2946 aa2.14□□□□□ -2.07
HMGN2P47-201ENST00000559378 CELSR1Q9NYQ6 3014 aa2.14□□□□□ -2.07
HMGN2P47-201ENST00000559378 PRUNE2Q8WUY3 3088 aa2.14□□□□□ -2.07
HMGN2P47-201ENST00000559378 MAP1AP78559 2803 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms