RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TEX49A0A1B0GTD5 131 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 hADV29S1A0JD25 119 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 CTAG1AP78358 180 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 Q6ZQY7 126 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
SNX1-204ENST00000559061 A0A0G2JQZ4 141 aa6.52□□□□□ -1.37
SNX1-204ENST00000559061 VAMP3Q15836 100 aa6.52□□□□□ -1.37
SNX1-204ENST00000559061 SSBP3-AS1Q7Z2R9 100 aa6.52□□□□□ -1.37
SNX1-204ENST00000559061 C9orf153Q5TBE3 101 aa6.51□□□□□ -1.37
SNX1-204ENST00000559061 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
SNX1-204ENST00000559061 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
SNX1-204ENST00000559061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.49□□□□□ -1.37
SNX1-204ENST00000559061 CLEC2BQ92478 149 aa6.49□□□□□ -1.37
SNX1-204ENST00000559061 LAMTOR3Q9UHA4 124 aa6.49□□□□□ -1.37
SNX1-204ENST00000559061 SLC25A20O43772 301 aa6.48□□□□□ -1.37
SNX1-204ENST00000559061 H0YGX0 51 aa6.47□□□□□ -1.37
SNX1-204ENST00000559061 SPINK1P00995 79 aa6.47□□□□□ -1.37
SNX1-204ENST00000559061 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
SNX1-204ENST00000559061 PRR4Q16378 134 aa6.46□□□□□ -1.38
SNX1-204ENST00000559061 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
SNX1-204ENST00000559061 TSTD3H0UI37 97 aa6.45□□□□□ -1.38
SNX1-204ENST00000559061 HRCT1Q6UXD1 115 aa6.44□□□□□ -1.38
SNX1-204ENST00000559061 A0A1B0GX51 115 aa6.43□□□□□ -1.38
SNX1-204ENST00000559061 M0R143 59 aa6.43□□□□□ -1.38
SNX1-204ENST00000559061 NAA38Q9BRA0 125 aaKnown RBP6.43□□□□□ -1.38
SNX1-204ENST00000559061 PSMB2P49721 201 aa6.42□□□□□ -1.38
SNX1-204ENST00000559061 IGFL1Q6UW32 110 aa6.42□□□□□ -1.38
SNX1-204ENST00000559061 PPDPFLQ8WWR9 84 aa6.42□□□□□ -1.38
SNX1-204ENST00000559061 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
SNX1-204ENST00000559061 H3BUT2 72 aa6.41□□□□□ -1.38
SNX1-204ENST00000559061 CD164Q04900 197 aa6.41□□□□□ -1.38
SNX1-204ENST00000559061 LST1O00453 97 aa6.4□□□□□ -1.38
SNX1-204ENST00000559061 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
SNX1-204ENST00000559061 RNF213Q63HN8 5207 aa6.39□□□□□ -1.39
SNX1-204ENST00000559061 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
SNX1-204ENST00000559061 NDUFV3P56181 108 aaKnown RBP6.38□□□□□ -1.39
SNX1-204ENST00000559061 TPRXLQ17RH7 258 aa6.38□□□□□ -1.39
SNX1-204ENST00000559061 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
SNX1-204ENST00000559061 Q5XG85 94 aa6.38□□□□□ -1.39
SNX1-204ENST00000559061 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
SNX1-204ENST00000559061 F8WEM9 126 aa6.37□□□□□ -1.39
SNX1-204ENST00000559061 BATFQ16520 125 aa6.37□□□□□ -1.39
SNX1-204ENST00000559061 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 TCL1BO95988 128 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 TRACP01848 142 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 COX6CP09669 75 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 Q6JHZ5 121 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 SNHG12Q9BXW3 62 aa6.36□□□□□ -1.39
SNX1-204ENST00000559061 ORMDL1Q9P0S3 153 aa6.35□□□□□ -1.39
SNX1-204ENST00000559061 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
SNX1-204ENST00000559061 FABP2P12104 132 aa6.34□□□□□ -1.39
SNX1-204ENST00000559061 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
SNX1-204ENST00000559061 C1orf195Q5TG92 126 aa6.34□□□□□ -1.39
SNX1-204ENST00000559061 SCGB1C2P0DMR2 95 aa6.33□□□□□ -1.4
SNX1-204ENST00000559061 LIMD2Q9BT23 127 aa6.33□□□□□ -1.4
SNX1-204ENST00000559061 A0A1B0GV72 72 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 H3BMG7 143 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 SNCGO76070 127 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 DNAL4O96015 105 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 Q6Q795 121 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
SNX1-204ENST00000559061 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
SNX1-204ENST00000559061 UBE2V1Q13404 147 aa6.3□□□□□ -1.4
SNX1-204ENST00000559061 ASB16-AS1Q495Z4 193 aa6.3□□□□□ -1.4
SNX1-204ENST00000559061 TMEM256-PLSCR3K7ERE1 68 aa6.29□□□□□ -1.4
SNX1-204ENST00000559061 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
SNX1-204ENST00000559061 ATXN8Q156A1 80 aa6.28□□□□□ -1.4
SNX1-204ENST00000559061 MUC2Q02817 5179 aa6.27□□□□□ -1.41
SNX1-204ENST00000559061 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
SNX1-204ENST00000559061 A0A1W2PPM0 123 aa6.27□□□□□ -1.41
SNX1-204ENST00000559061 Q96NJ1 140 aa6.27□□□□□ -1.41
SNX1-204ENST00000559061 H3BQ85 93 aa6.26□□□□□ -1.41
SNX1-204ENST00000559061 GHRHP01286 108 aa6.26□□□□□ -1.41
SNX1-204ENST00000559061 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
SNX1-204ENST00000559061 CDIP1Q9H305 208 aa6.26□□□□□ -1.41
SNX1-204ENST00000559061 A0A087WSZ3 146 aa6.25□□□□□ -1.41
SNX1-204ENST00000559061 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
SNX1-204ENST00000559061 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 PCP4L1A6NKN8 68 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 C9JAW5 83 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 MTURNQ8N3F0 131 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
SNX1-204ENST00000559061 LYRM7Q5U5X0 104 aa6.22□□□□□ -1.41
SNX1-204ENST00000559061 COL5A1-AS1Q5SY13 56 aa6.21□□□□□ -1.42
SNX1-204ENST00000559061 CCKP06307 115 aa6.2□□□□□ -1.42
SNX1-204ENST00000559061 RBM3P98179 157 aaKnown RBP6.2□□□□□ -1.42
SNX1-204ENST00000559061 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
SNX1-204ENST00000559061 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
SNX1-204ENST00000559061 Q6ZQT0 140 aa6.19□□□□□ -1.42
SNX1-204ENST00000559061 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
SNX1-204ENST00000559061 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
SNX1-204ENST00000559061 LOC110117498A0A087WWA1 95 aa6.17□□□□□ -1.42
SNX1-204ENST00000559061 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
SNX1-204ENST00000559061 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
SNX1-204ENST00000559061 H3BT86 120 aa6.16□□□□□ -1.42
SNX1-204ENST00000559061 DSCR8Q96T75 97 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms