RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 WFDC13Q8IUB5 93 aa7.2□□□□□ -1.26
SRP54-213ENST00000556994 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
SRP54-213ENST00000556994 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
SRP54-213ENST00000556994 hDV103S1A0JD37 113 aa7.19□□□□□ -1.26
SRP54-213ENST00000556994 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
SRP54-213ENST00000556994 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
SRP54-213ENST00000556994 A0A087WSZ3 146 aa7.18□□□□□ -1.26
SRP54-213ENST00000556994 DNAH3Q8TD57 4116 aa7.18□□□□□ -1.26
SRP54-213ENST00000556994 A0A096LNI7 61 aa7.18□□□□□ -1.26
SRP54-213ENST00000556994 KRTAP24-1Q3LI83 254 aa7.17□□□□□ -1.26
SRP54-213ENST00000556994 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
SRP54-213ENST00000556994 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
SRP54-213ENST00000556994 KRTAP11-1Q8IUC1 163 aa7.13□□□□□ -1.27
SRP54-213ENST00000556994 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
SRP54-213ENST00000556994 UBE2AP49459 152 aa7.13□□□□□ -1.27
SRP54-213ENST00000556994 CHTF8P0CG12 524 aa7.12□□□□□ -1.27
SRP54-213ENST00000556994 C16orf90A8MZG2 172 aa7.11□□□□□ -1.27
SRP54-213ENST00000556994 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
SRP54-213ENST00000556994 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
SRP54-213ENST00000556994 PSPHP1O15172 72 aa7.11□□□□□ -1.27
SRP54-213ENST00000556994 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
SRP54-213ENST00000556994 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
SRP54-213ENST00000556994 IGLV8-61A0A075B6I0 122 aa7.09□□□□□ -1.27
SRP54-213ENST00000556994 MP68P56378 58 aa7.09□□□□□ -1.28
SRP54-213ENST00000556994 Q1T7F1 81 aa7.08□□□□□ -1.28
SRP54-213ENST00000556994 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
SRP54-213ENST00000556994 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
SRP54-213ENST00000556994 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
SRP54-213ENST00000556994 CASC2Q6XLA1 102 aa7.07□□□□□ -1.28
SRP54-213ENST00000556994 STAB2Q8WWQ8 2551 aa7.07□□□□□ -1.28
SRP54-213ENST00000556994 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
SRP54-213ENST00000556994 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
SRP54-213ENST00000556994 H0Y9P7 68 aa7.06□□□□□ -1.28
SRP54-213ENST00000556994 K7EIL1 84 aa7.05□□□□□ -1.28
SRP54-213ENST00000556994 NDUFB1O75438 58 aa7.05□□□□□ -1.28
SRP54-213ENST00000556994 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
SRP54-213ENST00000556994 PRR15Q8IV56 129 aa7.05□□□□□ -1.28
SRP54-213ENST00000556994 B9D2Q9BPU9 175 aa7.04□□□□□ -1.28
SRP54-213ENST00000556994 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
SRP54-213ENST00000556994 MGAM2Q2M2H8 2515 aa7.03□□□□□ -1.28
SRP54-213ENST00000556994 A8MUN3 132 aa7.02□□□□□ -1.29
SRP54-213ENST00000556994 A8MWP4 228 aa7.02□□□□□ -1.29
SRP54-213ENST00000556994 H0Y9J4 135 aa7.02□□□□□ -1.29
SRP54-213ENST00000556994 UBE2DNLQ8IWF7 75 aa7.01□□□□□ -1.29
SRP54-213ENST00000556994 PANO1I0J062 215 aa7□□□□□ -1.29
SRP54-213ENST00000556994 SPRR1BP22528 89 aa7□□□□□ -1.29
SRP54-213ENST00000556994 A8MU10 97 aa6.98□□□□□ -1.29
SRP54-213ENST00000556994 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.29
SRP54-213ENST00000556994 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.29
SRP54-213ENST00000556994 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
SRP54-213ENST00000556994 SPANXA2-OT1Q8N9U9 137 aa6.95□□□□□ -1.3
SRP54-213ENST00000556994 H3BPC8 53 aa6.95□□□□□ -1.3
SRP54-213ENST00000556994 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
SRP54-213ENST00000556994 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
SRP54-213ENST00000556994 Q5VV11 94 aa6.94□□□□□ -1.3
SRP54-213ENST00000556994 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
SRP54-213ENST00000556994 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
SRP54-213ENST00000556994 V9GYY9 64 aa6.93□□□□□ -1.3
SRP54-213ENST00000556994 PLECQ15149 4684 aaKnown RBP6.92□□□□□ -1.3
SRP54-213ENST00000556994 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
SRP54-213ENST00000556994 Q96NJ1 140 aa6.92□□□□□ -1.3
SRP54-213ENST00000556994 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
SRP54-213ENST00000556994 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
SRP54-213ENST00000556994 PRR15LQ9BU68 103 aa6.9□□□□□ -1.3
SRP54-213ENST00000556994 DNHD1Q96M86 4753 aa6.9□□□□□ -1.3
SRP54-213ENST00000556994 COA5Q86WW8 74 aa6.9□□□□□ -1.31
SRP54-213ENST00000556994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.9□□□□□ -1.31
SRP54-213ENST00000556994 MOBPQ13875 183 aa6.89□□□□□ -1.31
SRP54-213ENST00000556994 ANAPC11Q9NYG5 84 aa6.89□□□□□ -1.31
SRP54-213ENST00000556994 NDUFS5O43920 106 aa6.88□□□□□ -1.31
SRP54-213ENST00000556994 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
SRP54-213ENST00000556994 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
SRP54-213ENST00000556994 CD164Q04900 197 aa6.88□□□□□ -1.31
SRP54-213ENST00000556994 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
SRP54-213ENST00000556994 LIMD2Q9BT23 127 aa6.87□□□□□ -1.31
SRP54-213ENST00000556994 PMAIP1Q13794 54 aa6.87□□□□□ -1.31
SRP54-213ENST00000556994 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
SRP54-213ENST00000556994 DYNC2H1Q8NCM8 4307 aaKnown RBP6.86□□□□□ -1.31
SRP54-213ENST00000556994 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
SRP54-213ENST00000556994 A0A087X002 238 aa6.84□□□□□ -1.31
SRP54-213ENST00000556994 ASB16-AS1Q495Z4 193 aa6.84□□□□□ -1.31
SRP54-213ENST00000556994 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
SRP54-213ENST00000556994 MDFIQ99750 246 aa6.84□□□□□ -1.31
SRP54-213ENST00000556994 SPACA4Q8TDM5 124 aa6.84□□□□□ -1.31
SRP54-213ENST00000556994 TP53AIP1Q9HCN2 124 aa6.83□□□□□ -1.32
SRP54-213ENST00000556994 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
SRP54-213ENST00000556994 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
SRP54-213ENST00000556994 SPAG11AQ6PDA7 123 aa6.82□□□□□ -1.32
SRP54-213ENST00000556994 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
SRP54-213ENST00000556994 SEC61GP60059 68 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 Q6ZR54 194 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 SPTSSBQ8NFR3 76 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 A6NED7 52 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 LCA10Q71F78 164 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
SRP54-213ENST00000556994 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
SRP54-213ENST00000556994 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
SRP54-213ENST00000556994 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms