RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 HIST1H4GQ99525 98 aa9.3□□□□□ -0.92
GPHN-211ENST00000556020 TCL1BO95988 128 aa9.28□□□□□ -0.92
GPHN-211ENST00000556020 COX8AP10176 69 aa9.24□□□□□ -0.93
GPHN-211ENST00000556020 LCE2CQ5TA81 110 aa9.24□□□□□ -0.93
GPHN-211ENST00000556020 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
GPHN-211ENST00000556020 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
GPHN-211ENST00000556020 Q6JHZ5 121 aa9.23□□□□□ -0.93
GPHN-211ENST00000556020 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
GPHN-211ENST00000556020 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
GPHN-211ENST00000556020 OCIAD2Q56VL3 154 aa9.22□□□□□ -0.93
GPHN-211ENST00000556020 BVES-AS1Q5T3Y7 98 aa9.22□□□□□ -0.93
GPHN-211ENST00000556020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
GPHN-211ENST00000556020 RPL37P61927 97 aaKnown RBP9.21□□□□□ -0.94
GPHN-211ENST00000556020 KRTAP19-2Q3LHN2 52 aa9.21□□□□□ -0.94
GPHN-211ENST00000556020 TMA7Q9Y2S6 64 aaKnown RBP9.21□□□□□ -0.94
GPHN-211ENST00000556020 TRBV7-7A0A0K0K1E9 115 aa9.2□□□□□ -0.94
GPHN-211ENST00000556020 C14orf144Q96I85 54 aa9.2□□□□□ -0.94
GPHN-211ENST00000556020 SNHG12Q9BXW3 62 aa9.2□□□□□ -0.94
GPHN-211ENST00000556020 RAB37Q96AX2 223 aa9.19□□□□□ -0.94
GPHN-211ENST00000556020 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
GPHN-211ENST00000556020 H3BUT2 72 aa9.18□□□□□ -0.94
GPHN-211ENST00000556020 DLEU1O43261 78 aa9.17□□□□□ -0.94
GPHN-211ENST00000556020 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
GPHN-211ENST00000556020 CFC1BP0CG36 223 aa9.16□□□□□ -0.94
GPHN-211ENST00000556020 CFC1P0CG37 223 aa9.16□□□□□ -0.94
GPHN-211ENST00000556020 MT1HP80294 61 aa9.16□□□□□ -0.94
GPHN-211ENST00000556020 SPATA45Q537H7 98 aa9.16□□□□□ -0.94
GPHN-211ENST00000556020 PPDPFLQ8WWR9 84 aa9.16□□□□□ -0.94
GPHN-211ENST00000556020 OBSCN-AS1Q96MR7 158 aa9.12□□□□□ -0.95
GPHN-211ENST00000556020 VAMP8Q9BV40 100 aa9.12□□□□□ -0.95
GPHN-211ENST00000556020 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
GPHN-211ENST00000556020 SNCGO76070 127 aa9.11□□□□□ -0.95
GPHN-211ENST00000556020 FAM218AQ96MZ4 157 aa9.11□□□□□ -0.95
GPHN-211ENST00000556020 A0A0B4J2C4 111 aa9.1□□□□□ -0.95
GPHN-211ENST00000556020 LST1O00453 97 aa9.1□□□□□ -0.95
GPHN-211ENST00000556020 COX6B2Q6YFQ2 88 aa9.1□□□□□ -0.95
GPHN-211ENST00000556020 C2orf91Q6ZV80 131 aa9.1□□□□□ -0.95
GPHN-211ENST00000556020 H0YGX0 51 aa9.09□□□□□ -0.95
GPHN-211ENST00000556020 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
GPHN-211ENST00000556020 CEND1Q8N111 149 aa9.06□□□□□ -0.96
GPHN-211ENST00000556020 M0R2T5 61 aa9.05□□□□□ -0.96
GPHN-211ENST00000556020 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
GPHN-211ENST00000556020 FABP2P12104 132 aa9.04□□□□□ -0.96
GPHN-211ENST00000556020 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
GPHN-211ENST00000556020 PRO1854Q9UHT4 67 aa9.04□□□□□ -0.96
GPHN-211ENST00000556020 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
GPHN-211ENST00000556020 A6NJY4 79 aa9.03□□□□□ -0.96
GPHN-211ENST00000556020 Q96NJ1 140 aa9.03□□□□□ -0.96
GPHN-211ENST00000556020 H3BMG7 143 aa9.02□□□□□ -0.97
GPHN-211ENST00000556020 FXYD2P54710 66 aa9.02□□□□□ -0.97
GPHN-211ENST00000556020 Q75L30 129 aa9.02□□□□□ -0.97
GPHN-211ENST00000556020 TEN1Q86WV5 123 aa9.02□□□□□ -0.97
GPHN-211ENST00000556020 A0A087WSZ3 146 aa9.01□□□□□ -0.97
GPHN-211ENST00000556020 Q6Q795 121 aa9.01□□□□□ -0.97
GPHN-211ENST00000556020 TRIAP1O43715 76 aa8.99□□□□□ -0.97
GPHN-211ENST00000556020 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
GPHN-211ENST00000556020 LOC105371267A0A1B0GV96 52 aa8.98□□□□□ -0.97
GPHN-211ENST00000556020 A0A1B0GX51 115 aa8.98□□□□□ -0.97
GPHN-211ENST00000556020 GHRHP01286 108 aa8.98□□□□□ -0.97
GPHN-211ENST00000556020 A0A1B0GV72 72 aa8.97□□□□□ -0.97
GPHN-211ENST00000556020 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
GPHN-211ENST00000556020 FSIP2Q5CZC0 6907 aa8.96□□□□□ -0.98
GPHN-211ENST00000556020 K7ERJ3 54 aa8.94□□□□□ -0.98
GPHN-211ENST00000556020 SMIM6P0DI80 62 aa8.94□□□□□ -0.98
GPHN-211ENST00000556020 PSMB2P49721 201 aa8.94□□□□□ -0.98
GPHN-211ENST00000556020 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
GPHN-211ENST00000556020 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
GPHN-211ENST00000556020 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
GPHN-211ENST00000556020 DNAL4O96015 105 aa8.93□□□□□ -0.98
GPHN-211ENST00000556020 SIGMAR1Q99720 223 aa8.93□□□□□ -0.98
GPHN-211ENST00000556020 DSCR10P59022 87 aa8.92□□□□□ -0.98
GPHN-211ENST00000556020 HSD52Q0P140 79 aa8.92□□□□□ -0.98
GPHN-211ENST00000556020 PYY3Q5JQD4 70 aa8.91□□□□□ -0.98
GPHN-211ENST00000556020 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
GPHN-211ENST00000556020 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
GPHN-211ENST00000556020 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
GPHN-211ENST00000556020 A8MUU9 505 aa8.89□□□□□ -0.99
GPHN-211ENST00000556020 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
GPHN-211ENST00000556020 COX6CP09669 75 aa8.86□□□□□ -0.99
GPHN-211ENST00000556020 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
GPHN-211ENST00000556020 TRBV7-4A0A0J9YYF1 115 aa8.83□□□□□ -1
GPHN-211ENST00000556020 H3BQ85 93 aa8.83□□□□□ -1
GPHN-211ENST00000556020 TMEM256-PLSCR3K7ERE1 68 aa8.83□□□□□ -1
GPHN-211ENST00000556020 CCKP06307 115 aa8.82□□□□□ -1
GPHN-211ENST00000556020 LINC00313P59037 77 aa8.82□□□□□ -1
GPHN-211ENST00000556020 UQCR10Q9UDW1 63 aa8.82□□□□□ -1
GPHN-211ENST00000556020 TRBV20-1A0A075B6N2 111 aa8.81□□□□□ -1
GPHN-211ENST00000556020 TRACP01848 142 aa8.81□□□□□ -1
GPHN-211ENST00000556020 TSTD3H0UI37 97 aa8.79□□□□□ -1
GPHN-211ENST00000556020 SCGB1C2P0DMR2 95 aa8.79□□□□□ -1
GPHN-211ENST00000556020 VPS25Q9BRG1 176 aa8.79□□□□□ -1
GPHN-211ENST00000556020 NOTCH2NLQ7Z3S9 236 aa8.77□□□□□ -1.01
GPHN-211ENST00000556020 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
GPHN-211ENST00000556020 KRTAP16-1A8MUX0 517 aa8.76□□□□□ -1.01
GPHN-211ENST00000556020 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
GPHN-211ENST00000556020 LINC00472Q9H8W2 130 aa8.76□□□□□ -1.01
GPHN-211ENST00000556020 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
GPHN-211ENST00000556020 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
GPHN-211ENST00000556020 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
GPHN-211ENST00000556020 DSCR8Q96T75 97 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms