RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 IQGAP2Q13576 1575 aa1.17□□□□□ -2.22
KTN1-220ENST00000555172 LYNX1G3V0Z9 82 aa1.16□□□□□ -2.22
KTN1-220ENST00000555172 MUC6Q6W4X9 2439 aa1.16□□□□□ -2.22
KTN1-220ENST00000555172 KIAA0586Q9BVV6 1533 aa1.16□□□□□ -2.22
KTN1-220ENST00000555172 DEPDC5O75140 1603 aa1.14□□□□□ -2.23
KTN1-220ENST00000555172 IAPPP10997 89 aa1.14□□□□□ -2.23
KTN1-220ENST00000555172 BDP1A6H8Y1 2624 aa1.14□□□□□ -2.23
KTN1-220ENST00000555172 UBR4Q5T4S7 5183 aa1.14□□□□□ -2.23
KTN1-220ENST00000555172 AKAP6Q13023 2319 aa1.13□□□□□ -2.23
KTN1-220ENST00000555172 ANK2Q01484 3957 aa1.13□□□□□ -2.23
KTN1-220ENST00000555172 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
KTN1-220ENST00000555172 TMEM167BQ9NRX6 74 aa1.12□□□□□ -2.23
KTN1-220ENST00000555172 PDE4DIPQ5VU43 2346 aa1.12□□□□□ -2.23
KTN1-220ENST00000555172 FBN2P35556 2912 aa1.11□□□□□ -2.23
KTN1-220ENST00000555172 DDX60Q8IY21 1712 aaKnown RBP1.11□□□□□ -2.23
KTN1-220ENST00000555172 FAM208AQ9UK61 1670 aaKnown RBP1.11□□□□□ -2.23
KTN1-220ENST00000555172 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
KTN1-220ENST00000555172 MACF1Q9UPN3 7388 aaKnown RBP1.11□□□□□ -2.23
KTN1-220ENST00000555172 PIEZO1Q92508 2521 aa1.1□□□□□ -2.23
KTN1-220ENST00000555172 IQGAP1P46940 1657 aa1.1□□□□□ -2.23
KTN1-220ENST00000555172 IGF2RP11717 2491 aa1.1□□□□□ -2.23
KTN1-220ENST00000555172 RPS27P42677 84 aaKnown RBP1.1□□□□□ -2.23
KTN1-220ENST00000555172 RPS27LQ71UM5 84 aaKnown RBP1.1□□□□□ -2.23
KTN1-220ENST00000555172 ATRQ13535 2644 aa1.09□□□□□ -2.23
KTN1-220ENST00000555172 CELSR1Q9NYQ6 3014 aa1.09□□□□□ -2.24
KTN1-220ENST00000555172 TPRP12270 2363 aaKnown RBP1.08□□□□□ -2.24
KTN1-220ENST00000555172 APCP25054 2843 aa1.08□□□□□ -2.24
KTN1-220ENST00000555172 CHD6Q8TD26 2715 aa1.08□□□□□ -2.24
KTN1-220ENST00000555172 CDC42BPAQ5VT25 1732 aa1.07□□□□□ -2.24
KTN1-220ENST00000555172 ABCA2Q9BZC7 2435 aa1.07□□□□□ -2.24
KTN1-220ENST00000555172 LMO7Q8WWI1 1683 aa1.07□□□□□ -2.24
KTN1-220ENST00000555172 NFAT5O94916 1531 aa1.06□□□□□ -2.24
KTN1-220ENST00000555172 PCNX1Q96RV3 2341 aa1.06□□□□□ -2.24
KTN1-220ENST00000555172 PCLOQ9Y6V0 5065 aa1.06□□□□□ -2.24
KTN1-220ENST00000555172 DEFB109BQ30KR1 87 aa1.05□□□□□ -2.24
KTN1-220ENST00000555172 VWFP04275 2813 aa1.04□□□□□ -2.24
KTN1-220ENST00000555172 TRPM2O94759 1503 aa1.04□□□□□ -2.24
KTN1-220ENST00000555172 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
KTN1-220ENST00000555172 NCOR1O75376 2440 aa1.04□□□□□ -2.24
KTN1-220ENST00000555172 CSPG4Q6UVK1 2322 aa1.03□□□□□ -2.24
KTN1-220ENST00000555172 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
KTN1-220ENST00000555172 SMIM2Q9BVW6 85 aa1.03□□□□□ -2.24
KTN1-220ENST00000555172 AKAP13Q12802 2813 aa1.03□□□□□ -2.24
KTN1-220ENST00000555172 WT1-ASQ06250 92 aa1.03□□□□□ -2.25
KTN1-220ENST00000555172 SPTA1P02549 2419 aa1.03□□□□□ -2.25
KTN1-220ENST00000555172 WFDC10BQ8IUB3 73 aa1.02□□□□□ -2.25
KTN1-220ENST00000555172 BSNQ9UPA5 3926 aa1.02□□□□□ -2.25
KTN1-220ENST00000555172 KAAG1Q9UBP8 84 aa1.01□□□□□ -2.25
KTN1-220ENST00000555172 OTOGQ6ZRI0 2925 aa1□□□□□ -2.25
KTN1-220ENST00000555172 A0A0C4DFX4 3053 aa1□□□□□ -2.25
KTN1-220ENST00000555172 TENM4Q6N022 2769 aa1□□□□□ -2.25
KTN1-220ENST00000555172 KIF21BO75037 1637 aa1□□□□□ -2.25
KTN1-220ENST00000555172 STAB1Q9NY15 2570 aa0.99□□□□□ -2.25
KTN1-220ENST00000555172 PRLHP81277 87 aa0.99□□□□□ -2.25
KTN1-220ENST00000555172 MUC2Q02817 5179 aa0.99□□□□□ -2.25
KTN1-220ENST00000555172 S4R3F8 94 aa0.99□□□□□ -2.25
KTN1-220ENST00000555172 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
KTN1-220ENST00000555172 NEBP20929 6669 aa0.98□□□□□ -2.25
KTN1-220ENST00000555172 TNRC18O15417 2968 aaPredicted RBP0.98□□□□□ -2.25
KTN1-220ENST00000555172 HECTD1Q9ULT8 2610 aa0.98□□□□□ -2.25
KTN1-220ENST00000555172 TEP1Q99973 2627 aaKnown RBP0.98□□□□□ -2.25
KTN1-220ENST00000555172 CHD8Q9HCK8 2581 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 FBN3Q75N90 2809 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 DEFB106AQ8N104 65 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 ATP7AQ04656 1500 aa0.97□□□□□ -2.25
KTN1-220ENST00000555172 NDUFA1O15239 70 aa0.96□□□□□ -2.26
KTN1-220ENST00000555172 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
KTN1-220ENST00000555172 SNRPGP62308 76 aaKnown RBP0.95□□□□□ -2.26
KTN1-220ENST00000555172 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
KTN1-220ENST00000555172 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
KTN1-220ENST00000555172 SMR3AQ99954 134 aa0.94□□□□□ -2.26
KTN1-220ENST00000555172 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
KTN1-220ENST00000555172 SAMD9LQ8IVG5 1584 aa0.94□□□□□ -2.26
KTN1-220ENST00000555172 UBR5O95071 2799 aaPredicted RBP0.93□□□□□ -2.26
KTN1-220ENST00000555172 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
KTN1-220ENST00000555172 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
KTN1-220ENST00000555172 PKD1L1Q8TDX9 2849 aa0.92□□□□□ -2.26
KTN1-220ENST00000555172 CEP290O15078 2479 aa0.91□□□□□ -2.26
KTN1-220ENST00000555172 PTPN13Q12923 2485 aa0.91□□□□□ -2.26
KTN1-220ENST00000555172 CREBBPQ92793 2442 aa0.91□□□□□ -2.26
KTN1-220ENST00000555172 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
KTN1-220ENST00000555172 H3BUA1 57 aa0.9□□□□□ -2.27
KTN1-220ENST00000555172 EP300Q09472 2414 aaPredicted RBP0.9□□□□□ -2.27
KTN1-220ENST00000555172 ZFYVE26Q68DK2 2539 aa0.89□□□□□ -2.27
KTN1-220ENST00000555172 SPENQ96T58 3664 aaKnown RBP0.89□□□□□ -2.27
KTN1-220ENST00000555172 PDZD2O15018 2839 aa0.88□□□□□ -2.27
KTN1-220ENST00000555172 FAT2Q9NYQ8 4349 aa0.88□□□□□ -2.27
KTN1-220ENST00000555172 ZZEF1O43149 2961 aa0.88□□□□□ -2.27
KTN1-220ENST00000555172 NBASA2RRP1 2371 aa0.88□□□□□ -2.27
KTN1-220ENST00000555172 SPINK1P00995 79 aa0.87□□□□□ -2.27
KTN1-220ENST00000555172 COL6A5A8TX70 2615 aa0.87□□□□□ -2.27
KTN1-220ENST00000555172 ANKHD1Q8IWZ3 2542 aaKnown RBP0.87□□□□□ -2.27
KTN1-220ENST00000555172 SETD2Q9BYW2 2564 aaPredicted RBP0.87□□□□□ -2.27
KTN1-220ENST00000555172 DEFB135Q30KP9 77 aa0.87□□□□□ -2.27
KTN1-220ENST00000555172 LYSTQ99698 3801 aa0.86□□□□□ -2.27
KTN1-220ENST00000555172 IGLV5-48A0A075B6I7 105 aa0.86□□□□□ -2.27
KTN1-220ENST00000555172 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms