RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SPINK4O60575 86 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 MPC2O95563 127 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 MT1FP04733 61 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 MT1HL1P0DM35 61 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 NCMAPQ5T1S8 102 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 TRGV9Q99603 122 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 MED14O60244 1454 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 C4AP0C0L4 1744 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 C4BP0C0L5 1744 aa-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 MT2AP02795 61 aa-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 TARBP1Q13395 1621 aaKnown RBP-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 ZC3H13Q5T200 1668 aaKnown RBP-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 LY75O60449 1722 aa-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 ITSN1Q15811 1721 aa-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 DOT1LQ8TEK3 1739 aa-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 ANKRD36A6QL64 1941 aa-0.25□□□□□ -2.45
SCFD1-213ENST00000554776 PLCH1Q4KWH8 1693 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 ATOX1O00244 68 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 MT1AP04731 61 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 COL5A1-AS1Q5SY13 56 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 COX6B2Q6YFQ2 88 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 WFDC9Q8NEX5 89 aa-0.26□□□□□ -2.45
SCFD1-213ENST00000554776 RGPD2P0DJD1 1756 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 QSER1Q2KHR3 1735 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 ADAMTS12P58397 1594 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 NRXN1Q9ULB1 1477 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 MT1EP04732 61 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 FAUP35544 74 aaKnown RBP-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 SERP2Q8N6R1 65 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 LTN1O94822 1766 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 MON2Q7Z3U7 1717 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 NRAPQ86VF7 1730 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 PTPN23Q9H3S7 1636 aa-0.27□□□□□ -2.45
SCFD1-213ENST00000554776 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 IQSEC2Q5JU85 1478 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 MAGI2Q86UL8 1455 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 FYCO1Q9BQS8 1478 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 ARMS2P0C7Q2 107 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 MT1XP80297 61 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 KRTAP19-2Q3LHN2 52 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 CRYBG1Q9Y4K1 1723 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 SHPRHQ149N8 1683 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 PREX2Q70Z35 1606 aa-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 RNF17Q9BXT8 1623 aaKnown RBP-0.28□□□□□ -2.45
SCFD1-213ENST00000554776 NKTRP30414 1462 aaKnown RBP-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 RGPD4Q7Z3J3 1758 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 POLR1AO95602 1720 aaPredicted RBP-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 ANKRD26Q9UPS8 1709 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 DEFB4AO15263 64 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 DEFB121Q5J5C9 76 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 ACBD7Q8N6N7 88 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 MT1LQ93083 61 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 DPY30Q9C005 99 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 CDC42BPGQ6DT37 1551 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 RAPGEF2Q9Y4G8 1499 aa-0.29□□□□□ -2.46
SCFD1-213ENST00000554776 EDC4Q6P2E9 1401 aaKnown RBP-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 LRRC37AA6NMS7 1700 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 WIZO95785 1651 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 C5P01031 1676 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 I3L3M4 83 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 LINC00032P0C843 101 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 KRTAP19-5Q3LI72 72 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 H1FX-AS1Q4G0G2 97 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 TTTY10Q9BZA0 68 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 PSENENQ9NZ42 101 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 CUX1P39880 1505 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 A0A1B0GUL6 1792 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 CCDC141Q6ZP82 1450 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 TEX14Q8IWB6 1497 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 PARP4Q9UKK3 1724 aaKnown RBP-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 MYH4Q9Y623 1939 aa-0.3□□□□□ -2.46
SCFD1-213ENST00000554776 TMEM131LA2VDJ0 1609 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 MAST1Q9Y2H9 1570 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 ANKRD36CQ5JPF3 1778 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 SCN11AQ9UI33 1791 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 UQCRHLA0A096LP55 91 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 DEFB104AQ8WTQ1 72 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 PKD1L3Q7Z443 1732 aa-0.31□□□□□ -2.46
SCFD1-213ENST00000554776 RGPD1P0DJD0 1748 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 LRRIQ1Q96JM4 1722 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 TOGARAM1Q9Y4F4 1720 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 ARHGAP35Q9NRY4 1499 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 F8WEM9 126 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 M0R143 59 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 DEFB1P60022 68 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 ETDBQ3ZM63 59 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 DEPDC5O75140 1603 aa-0.32□□□□□ -2.46
SCFD1-213ENST00000554776 DDX60Q8IY21 1712 aaKnown RBP-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 KIAA0586Q9BVV6 1533 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 NESP48681 1621 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 USP32Q8NFA0 1604 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 NRXN3Q9Y4C0 1643 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 LEPROTL1O95214 131 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 RPS29P62273 56 aaKnown RBP-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 UBR1Q8IWV7 1749 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 ABCC2Q92887 1545 aa-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 CLTCQ00610 1675 aaKnown RBP-0.33□□□□□ -2.46
SCFD1-213ENST00000554776 PREX1Q8TCU6 1659 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms