RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LINC01558Q9Y6Z2 57 aa8.67□□□□□ -1.02
VTI1B-204ENST00000554659 SZT2Q5T011 3432 aa8.67□□□□□ -1.02
VTI1B-204ENST00000554659 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
VTI1B-204ENST00000554659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
VTI1B-204ENST00000554659 TRIOO75962 3097 aa8.65□□□□□ -1.03
VTI1B-204ENST00000554659 HECTD1Q9ULT8 2610 aa8.64□□□□□ -1.03
VTI1B-204ENST00000554659 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
VTI1B-204ENST00000554659 SPRR1BP22528 89 aa8.62□□□□□ -1.03
VTI1B-204ENST00000554659 Q6ZSA8 131 aa8.61□□□□□ -1.03
VTI1B-204ENST00000554659 CSAG1Q6PB30 78 aa8.6□□□□□ -1.03
VTI1B-204ENST00000554659 TNP2Q05952 138 aa8.59□□□□□ -1.03
VTI1B-204ENST00000554659 Q5VV11 94 aa8.59□□□□□ -1.03
VTI1B-204ENST00000554659 LINC00472Q9H8W2 130 aa8.59□□□□□ -1.03
VTI1B-204ENST00000554659 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
VTI1B-204ENST00000554659 PLAC8Q9NZF1 115 aa8.57□□□□□ -1.04
VTI1B-204ENST00000554659 TRANK1O15050 2925 aa8.57□□□□□ -1.04
VTI1B-204ENST00000554659 A0A0A0MQY5 61 aa8.56□□□□□ -1.04
VTI1B-204ENST00000554659 SPINK7P58062 85 aa8.56□□□□□ -1.04
VTI1B-204ENST00000554659 DMAC1Q96GE9 116 aa8.56□□□□□ -1.04
VTI1B-204ENST00000554659 VCANP13611 3396 aa8.55□□□□□ -1.04
VTI1B-204ENST00000554659 STAB1Q9NY15 2570 aa8.52□□□□□ -1.04
VTI1B-204ENST00000554659 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
VTI1B-204ENST00000554659 KRTAP26-1Q6PEX3 210 aa8.51□□□□□ -1.05
VTI1B-204ENST00000554659 SPEGQ15772 3267 aa8.5□□□□□ -1.05
VTI1B-204ENST00000554659 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
VTI1B-204ENST00000554659 Q5W150 140 aa8.5□□□□□ -1.05
VTI1B-204ENST00000554659 LAMA1P25391 3075 aa8.49□□□□□ -1.05
VTI1B-204ENST00000554659 OXTP01178 125 aa8.48□□□□□ -1.05
VTI1B-204ENST00000554659 EYSQ5T1H1 3165 aa8.48□□□□□ -1.05
VTI1B-204ENST00000554659 CFAP54Q96N23 3096 aa8.47□□□□□ -1.05
VTI1B-204ENST00000554659 AKAP13Q12802 2813 aa8.45□□□□□ -1.06
VTI1B-204ENST00000554659 S4R3F8 94 aa8.44□□□□□ -1.06
VTI1B-204ENST00000554659 M0R2T5 61 aa8.43□□□□□ -1.06
VTI1B-204ENST00000554659 CELSR3Q9NYQ7 3312 aa8.43□□□□□ -1.06
VTI1B-204ENST00000554659 VPS13AQ96RL7 3174 aa8.4□□□□□ -1.06
VTI1B-204ENST00000554659 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.07
VTI1B-204ENST00000554659 R4GN34 69 aa8.4□□□□□ -1.07
VTI1B-204ENST00000554659 MYO15AQ9UKN7 3530 aa8.39□□□□□ -1.07
VTI1B-204ENST00000554659 SPTBN5Q9NRC6 3674 aaKnown RBP8.39□□□□□ -1.07
VTI1B-204ENST00000554659 WDFY4Q6ZS81 3184 aa8.38□□□□□ -1.07
VTI1B-204ENST00000554659 KRTAP4-16G5E9R7 235 aaPredicted RBP8.37□□□□□ -1.07
VTI1B-204ENST00000554659 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
VTI1B-204ENST00000554659 ROMO1P60602 79 aa8.36□□□□□ -1.07
VTI1B-204ENST00000554659 NBEAL1Q6ZS30 2694 aa8.36□□□□□ -1.07
VTI1B-204ENST00000554659 Q6ZR54 194 aa8.35□□□□□ -1.07
VTI1B-204ENST00000554659 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
VTI1B-204ENST00000554659 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
VTI1B-204ENST00000554659 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
VTI1B-204ENST00000554659 REV3LO60673 3130 aa8.31□□□□□ -1.08
VTI1B-204ENST00000554659 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
VTI1B-204ENST00000554659 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
VTI1B-204ENST00000554659 H1FX-AS1Q4G0G2 97 aa8.27□□□□□ -1.08
VTI1B-204ENST00000554659 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.09
VTI1B-204ENST00000554659 NOTCH1P46531 2555 aa8.27□□□□□ -1.09
VTI1B-204ENST00000554659 COL6A3P12111 3177 aa8.24□□□□□ -1.09
VTI1B-204ENST00000554659 CENPEQ02224 2701 aa8.24□□□□□ -1.09
VTI1B-204ENST00000554659 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
VTI1B-204ENST00000554659 M0QZ58 72 aa8.23□□□□□ -1.09
VTI1B-204ENST00000554659 USP34Q70CQ2 3546 aa8.23□□□□□ -1.09
VTI1B-204ENST00000554659 FRYLO94915 3013 aa8.22□□□□□ -1.09
VTI1B-204ENST00000554659 SPATA8Q6RVD6 105 aa8.21□□□□□ -1.09
VTI1B-204ENST00000554659 MGAQ8IWI9 3026 aa8.2□□□□□ -1.1
VTI1B-204ENST00000554659 KRTAP10-1P60331 282 aa8.18□□□□□ -1.1
VTI1B-204ENST00000554659 PANO1I0J062 215 aa8.18□□□□□ -1.1
VTI1B-204ENST00000554659 UNC79Q9P2D8 2635 aa8.16□□□□□ -1.1
VTI1B-204ENST00000554659 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
VTI1B-204ENST00000554659 LCE6AA0A183 80 aa8.15□□□□□ -1.1
VTI1B-204ENST00000554659 GCN1Q92616 2671 aaKnown RBP8.15□□□□□ -1.11
VTI1B-204ENST00000554659 TEP1Q99973 2627 aaKnown RBP8.15□□□□□ -1.11
VTI1B-204ENST00000554659 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
VTI1B-204ENST00000554659 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
VTI1B-204ENST00000554659 FREM2Q5SZK8 3169 aa8.12□□□□□ -1.11
VTI1B-204ENST00000554659 TEX15Q9BXT5 2789 aa8.12□□□□□ -1.11
VTI1B-204ENST00000554659 ZNF292O60281 2723 aa8.11□□□□□ -1.11
VTI1B-204ENST00000554659 ADM2Q7Z4H4 148 aa8.11□□□□□ -1.11
VTI1B-204ENST00000554659 DSPP15924 2871 aaKnown RBP8.1□□□□□ -1.11
VTI1B-204ENST00000554659 A0A087X002 238 aa8.08□□□□□ -1.12
VTI1B-204ENST00000554659 NOTCH2NLQ7Z3S9 236 aa8.08□□□□□ -1.12
VTI1B-204ENST00000554659 SETXQ7Z333 2677 aaKnown RBP8.08□□□□□ -1.12
VTI1B-204ENST00000554659 BOD1L1Q8NFC6 3051 aa8.07□□□□□ -1.12
VTI1B-204ENST00000554659 COL6A5A8TX70 2615 aa8.06□□□□□ -1.12
VTI1B-204ENST00000554659 Q5VSD8 79 aa8.06□□□□□ -1.12
VTI1B-204ENST00000554659 FRYQ5TBA9 3013 aa8.06□□□□□ -1.12
VTI1B-204ENST00000554659 NBEAQ8NFP9 2946 aa8.05□□□□□ -1.12
VTI1B-204ENST00000554659 A6NN06 94 aa8.05□□□□□ -1.12
VTI1B-204ENST00000554659 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
VTI1B-204ENST00000554659 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
VTI1B-204ENST00000554659 KRTAP25-1Q3LHN0 102 aa8.03□□□□□ -1.12
VTI1B-204ENST00000554659 PLAC4Q8WY50 150 aa8.02□□□□□ -1.12
VTI1B-204ENST00000554659 BAHCC1Q9P281 2608 aa8.01□□□□□ -1.13
VTI1B-204ENST00000554659 A8MU10 97 aa7.99□□□□□ -1.13
VTI1B-204ENST00000554659 RPS29P62273 56 aaKnown RBP7.99□□□□□ -1.13
VTI1B-204ENST00000554659 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
VTI1B-204ENST00000554659 NBEAL2Q6ZNJ1 2754 aa7.96□□□□□ -1.13
VTI1B-204ENST00000554659 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
VTI1B-204ENST00000554659 NDUFAF8A1L188 74 aa7.95□□□□□ -1.14
VTI1B-204ENST00000554659 WDFY3Q8IZQ1 3526 aa7.95□□□□□ -1.14
VTI1B-204ENST00000554659 MAP1AP78559 2803 aaPredicted RBP7.94□□□□□ -1.14
VTI1B-204ENST00000554659 LOC400499M0QZD8 3231 aa7.91□□□□□ -1.14
VTI1B-204ENST00000554659 C20orf166-AS1Q96NR2 134 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms