RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 Q6ZQY7 126 aa8.88□□□□□ -0.99
SHMT2-208ENST00000553868 BAALC-AS2P0C853 105 aa8.87□□□□□ -0.99
SHMT2-208ENST00000553868 ANKRD29Q8N6D5 301 aa8.87□□□□□ -0.99
SHMT2-208ENST00000553868 Q9BRP9 147 aa8.87□□□□□ -0.99
SHMT2-208ENST00000553868 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
SHMT2-208ENST00000553868 MTURNQ8N3F0 131 aa8.86□□□□□ -0.99
SHMT2-208ENST00000553868 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
SHMT2-208ENST00000553868 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
SHMT2-208ENST00000553868 TMEM256-PLSCR3K7ERE1 68 aa8.85□□□□□ -0.99
SHMT2-208ENST00000553868 SMCR5Q8TEV8 140 aa8.85□□□□□ -0.99
SHMT2-208ENST00000553868 PPDPFLQ8WWR9 84 aa8.85□□□□□ -0.99
SHMT2-208ENST00000553868 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
SHMT2-208ENST00000553868 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
SHMT2-208ENST00000553868 IGLV7-43P04211 117 aa8.83□□□□□ -1
SHMT2-208ENST00000553868 ZNF861PO60384 105 aa8.82□□□□□ -1
SHMT2-208ENST00000553868 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
SHMT2-208ENST00000553868 ZNF706Q9Y5V0 76 aaPredicted RBP8.81□□□□□ -1
SHMT2-208ENST00000553868 ERC2-IT1O76042 136 aa8.8□□□□□ -1
SHMT2-208ENST00000553868 IGLV5-48A0A075B6I7 105 aa8.79□□□□□ -1
SHMT2-208ENST00000553868 TEN1Q86WV5 123 aa8.79□□□□□ -1
SHMT2-208ENST00000553868 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
SHMT2-208ENST00000553868 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
SHMT2-208ENST00000553868 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
SHMT2-208ENST00000553868 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
SHMT2-208ENST00000553868 LAMTOR3Q9UHA4 124 aa8.77□□□□□ -1.01
SHMT2-208ENST00000553868 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
SHMT2-208ENST00000553868 Q8N377 158 aa8.75□□□□□ -1.01
SHMT2-208ENST00000553868 NDUFV3P56181 108 aaKnown RBP8.74□□□□□ -1.01
SHMT2-208ENST00000553868 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-208ENST00000553868 SPRR1BP22528 89 aa8.73□□□□□ -1.01
SHMT2-208ENST00000553868 GAGE2AQ6NT46 116 aa8.73□□□□□ -1.01
SHMT2-208ENST00000553868 F8WEM9 126 aa8.72□□□□□ -1.01
SHMT2-208ENST00000553868 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
SHMT2-208ENST00000553868 FSIP2Q5CZC0 6907 aa8.71□□□□□ -1.01
SHMT2-208ENST00000553868 OBSCN-AS1Q96MR7 158 aa8.71□□□□□ -1.02
SHMT2-208ENST00000553868 RBM3P98179 157 aaKnown RBP8.7□□□□□ -1.02
SHMT2-208ENST00000553868 C21orf62-AS1Q17RA5 79 aa8.7□□□□□ -1.02
SHMT2-208ENST00000553868 J3QR89 54 aa8.69□□□□□ -1.02
SHMT2-208ENST00000553868 LINC00483Q53H64 154 aa8.69□□□□□ -1.02
SHMT2-208ENST00000553868 PDE6GP18545 87 aa8.68□□□□□ -1.02
SHMT2-208ENST00000553868 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
SHMT2-208ENST00000553868 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
SHMT2-208ENST00000553868 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-208ENST00000553868 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
SHMT2-208ENST00000553868 A0A1B0GV72 72 aa8.65□□□□□ -1.02
SHMT2-208ENST00000553868 C3orf22Q8N5N4 141 aa8.65□□□□□ -1.02
SHMT2-208ENST00000553868 C14orf132Q9NPU4 83 aa8.65□□□□□ -1.02
SHMT2-208ENST00000553868 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
SHMT2-208ENST00000553868 K7ERU9 68 aa8.64□□□□□ -1.03
SHMT2-208ENST00000553868 Q6JHZ5 121 aa8.63□□□□□ -1.03
SHMT2-208ENST00000553868 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
SHMT2-208ENST00000553868 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
SHMT2-208ENST00000553868 TRBV7-4A0A0J9YYF1 115 aa8.61□□□□□ -1.03
SHMT2-208ENST00000553868 CCKP06307 115 aa8.6□□□□□ -1.03
SHMT2-208ENST00000553868 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
SHMT2-208ENST00000553868 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
SHMT2-208ENST00000553868 Q6ZQT0 140 aa8.59□□□□□ -1.03
SHMT2-208ENST00000553868 Q8NBF4 154 aa8.58□□□□□ -1.04
SHMT2-208ENST00000553868 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
SHMT2-208ENST00000553868 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
SHMT2-208ENST00000553868 ACYP1P07311 99 aa8.57□□□□□ -1.04
SHMT2-208ENST00000553868 CRYGAP11844 174 aa8.57□□□□□ -1.04
SHMT2-208ENST00000553868 ANAPC11Q9NYG5 84 aa8.57□□□□□ -1.04
SHMT2-208ENST00000553868 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
SHMT2-208ENST00000553868 A0A1B0GW54 56 aa8.55□□□□□ -1.04
SHMT2-208ENST00000553868 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
SHMT2-208ENST00000553868 MOBPQ13875 183 aa8.55□□□□□ -1.04
SHMT2-208ENST00000553868 IGFL1Q6UW32 110 aa8.55□□□□□ -1.04
SHMT2-208ENST00000553868 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
SHMT2-208ENST00000553868 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
SHMT2-208ENST00000553868 SSBP3-AS1Q7Z2R9 100 aa8.54□□□□□ -1.04
SHMT2-208ENST00000553868 A0A1W2PNM2 257 aa8.5□□□□□ -1.05
SHMT2-208ENST00000553868 Q6Q795 121 aa8.5□□□□□ -1.05
SHMT2-208ENST00000553868 A0A087X002 238 aa8.49□□□□□ -1.05
SHMT2-208ENST00000553868 KRTAP13-2Q52LG2 175 aa8.47□□□□□ -1.05
SHMT2-208ENST00000553868 TYMSOSQ8TAI1 123 aa8.47□□□□□ -1.05
SHMT2-208ENST00000553868 CD164Q04900 197 aa8.46□□□□□ -1.06
SHMT2-208ENST00000553868 UBL5Q9BZL1 73 aa8.46□□□□□ -1.06
SHMT2-208ENST00000553868 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
SHMT2-208ENST00000553868 PRR26Q8N8Z3 221 aa8.44□□□□□ -1.06
SHMT2-208ENST00000553868 LINC00846Q9NV44 126 aa8.44□□□□□ -1.06
SHMT2-208ENST00000553868 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
SHMT2-208ENST00000553868 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
SHMT2-208ENST00000553868 A0A087WSZ3 146 aa8.42□□□□□ -1.06
SHMT2-208ENST00000553868 SS18L2Q9UHA2 77 aa8.42□□□□□ -1.06
SHMT2-208ENST00000553868 NREPQ16612 68 aa8.41□□□□□ -1.06
SHMT2-208ENST00000553868 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
SHMT2-208ENST00000553868 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
SHMT2-208ENST00000553868 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
SHMT2-208ENST00000553868 Q6ZVQ6 151 aa8.39□□□□□ -1.07
SHMT2-208ENST00000553868 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
SHMT2-208ENST00000553868 CDIP1Q9H305 208 aa8.39□□□□□ -1.07
SHMT2-208ENST00000553868 LINC00304Q8N9R0 145 aa8.37□□□□□ -1.07
SHMT2-208ENST00000553868 SPINK1P00995 79 aa8.36□□□□□ -1.07
SHMT2-208ENST00000553868 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
SHMT2-208ENST00000553868 LIMD2Q9BT23 127 aa8.36□□□□□ -1.07
SHMT2-208ENST00000553868 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
SHMT2-208ENST00000553868 Q5XG85 94 aa8.33□□□□□ -1.08
SHMT2-208ENST00000553868 BPY2O14599 106 aa8.31□□□□□ -1.08
SHMT2-208ENST00000553868 CXCL6P80162 114 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms