RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
LINC-ROR-201ENST00000553704 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
LINC-ROR-201ENST00000553704 NDUFC1O43677 76 aa4.37□□□□□ -1.71
LINC-ROR-201ENST00000553704 FAM229BQ4G0N7 80 aa4.36□□□□□ -1.71
LINC-ROR-201ENST00000553704 LINC00474Q9P2X8 69 aa4.36□□□□□ -1.71
LINC-ROR-201ENST00000553704 DYNC2H1Q8NCM8 4307 aaKnown RBP4.36□□□□□ -1.71
LINC-ROR-201ENST00000553704 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
LINC-ROR-201ENST00000553704 IGFL1Q6UW32 110 aa4.36□□□□□ -1.71
LINC-ROR-201ENST00000553704 MGAM2Q2M2H8 2515 aa4.35□□□□□ -1.71
LINC-ROR-201ENST00000553704 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
LINC-ROR-201ENST00000553704 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.35□□□□□ -1.71
LINC-ROR-201ENST00000553704 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
LINC-ROR-201ENST00000553704 TENM2Q9NT68 2774 aa4.35□□□□□ -1.71
LINC-ROR-201ENST00000553704 A0A1B0GW54 56 aa4.34□□□□□ -1.71
LINC-ROR-201ENST00000553704 LCE6AA0A183 80 aa4.34□□□□□ -1.72
LINC-ROR-201ENST00000553704 C16orf90A8MZG2 172 aa4.34□□□□□ -1.72
LINC-ROR-201ENST00000553704 PSCAO43653 123 aa4.33□□□□□ -1.72
LINC-ROR-201ENST00000553704 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
LINC-ROR-201ENST00000553704 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
LINC-ROR-201ENST00000553704 PHF5AQ7RTV0 110 aaKnown RBP4.33□□□□□ -1.72
LINC-ROR-201ENST00000553704 A0A087WSZ3 146 aa4.32□□□□□ -1.72
LINC-ROR-201ENST00000553704 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
LINC-ROR-201ENST00000553704 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
LINC-ROR-201ENST00000553704 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
LINC-ROR-201ENST00000553704 RPL37AP61513 92 aaKnown RBP4.31□□□□□ -1.72
LINC-ROR-201ENST00000553704 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
LINC-ROR-201ENST00000553704 IGLV8-61A0A075B6I0 122 aa4.31□□□□□ -1.72
LINC-ROR-201ENST00000553704 PANO1I0J062 215 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 PRO0628Q9UI54 55 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 UBE2AP49459 152 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
LINC-ROR-201ENST00000553704 C1orf195Q5TG92 126 aa4.29□□□□□ -1.72
LINC-ROR-201ENST00000553704 PRR26Q8N8Z3 221 aa4.28□□□□□ -1.72
LINC-ROR-201ENST00000553704 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
LINC-ROR-201ENST00000553704 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
LINC-ROR-201ENST00000553704 HECTD4Q9Y4D8 3996 aa4.27□□□□□ -1.73
LINC-ROR-201ENST00000553704 PRR4Q16378 134 aa4.27□□□□□ -1.73
LINC-ROR-201ENST00000553704 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
LINC-ROR-201ENST00000553704 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
LINC-ROR-201ENST00000553704 SPRR1BP22528 89 aa4.26□□□□□ -1.73
LINC-ROR-201ENST00000553704 XP32Q5T750 250 aa4.26□□□□□ -1.73
LINC-ROR-201ENST00000553704 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
LINC-ROR-201ENST00000553704 C1orf64Q8NEQ6 169 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 Q6ZRN7 208 aaPredicted RBP4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 H0Y9J4 135 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 C14orf177Q52M58 125 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 LINC00472Q9H8W2 130 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
LINC-ROR-201ENST00000553704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.24□□□□□ -1.73
LINC-ROR-201ENST00000553704 NBDYA0A0U1RRE5 68 aa4.24□□□□□ -1.73
LINC-ROR-201ENST00000553704 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
LINC-ROR-201ENST00000553704 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 CD164Q04900 197 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 MDFIQ99750 246 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 A8MWP4 228 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 B9D2Q9BPU9 175 aa4.23□□□□□ -1.73
LINC-ROR-201ENST00000553704 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
LINC-ROR-201ENST00000553704 FBN3Q75N90 2809 aa4.22□□□□□ -1.73
LINC-ROR-201ENST00000553704 IGLV9-49A0A0B4J1Y8 123 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 H0Y9P7 68 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 SPACA4Q8TDM5 124 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 DNAH17Q9UFH2 4485 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 Q96NJ1 140 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 CYP4F30PQ9H0H9 118 aa4.21□□□□□ -1.74
LINC-ROR-201ENST00000553704 MP68P56378 58 aa4.2□□□□□ -1.74
LINC-ROR-201ENST00000553704 NDUFB1O75438 58 aa4.18□□□□□ -1.74
LINC-ROR-201ENST00000553704 MOBPQ13875 183 aa4.18□□□□□ -1.74
LINC-ROR-201ENST00000553704 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
LINC-ROR-201ENST00000553704 Q1T7F1 81 aa4.17□□□□□ -1.74
LINC-ROR-201ENST00000553704 A0A087WTM6 91 aa4.17□□□□□ -1.74
LINC-ROR-201ENST00000553704 NUPR2A6NF83 97 aa4.17□□□□□ -1.74
LINC-ROR-201ENST00000553704 PSPHP1O15172 72 aa4.17□□□□□ -1.74
LINC-ROR-201ENST00000553704 LINC00483Q53H64 154 aa4.16□□□□□ -1.74
LINC-ROR-201ENST00000553704 PSORS1C2Q9UIG4 136 aa4.16□□□□□ -1.74
LINC-ROR-201ENST00000553704 WWC2-AS2Q96NR7 200 aa4.16□□□□□ -1.74
LINC-ROR-201ENST00000553704 ALMS1Q8TCU4 4167 aa4.16□□□□□ -1.74
LINC-ROR-201ENST00000553704 MEGF8Q7Z7M0 2845 aa4.15□□□□□ -1.74
LINC-ROR-201ENST00000553704 RTL8CO15255 209 aa4.15□□□□□ -1.75
LINC-ROR-201ENST00000553704 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
LINC-ROR-201ENST00000553704 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.75
LINC-ROR-201ENST00000553704 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
LINC-ROR-201ENST00000553704 H3BPC8 53 aa4.14□□□□□ -1.75
LINC-ROR-201ENST00000553704 SPANXA2-OT1Q8N9U9 137 aa4.14□□□□□ -1.75
LINC-ROR-201ENST00000553704 C8orf17Q9NRJ1 99 aa4.14□□□□□ -1.75
LINC-ROR-201ENST00000553704 A0A087X002 238 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 IGHV6-1A0A0B4J1U7 121 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
LINC-ROR-201ENST00000553704 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms