RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 A0A0J9YXY3 114 aa5.45□□□□□ -1.54
ACTN1-208ENST00000553370 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
ACTN1-208ENST00000553370 TAL2Q16559 108 aa5.44□□□□□ -1.54
ACTN1-208ENST00000553370 Q1RN00 199 aa5.44□□□□□ -1.54
ACTN1-208ENST00000553370 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
ACTN1-208ENST00000553370 DEFB105AQ8NG35 78 aa5.44□□□□□ -1.54
ACTN1-208ENST00000553370 CFC1BP0CG36 223 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 COX7BP24311 80 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 ADAMTSL4-AS1Q5T5F5 129 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 C12orf57Q99622 126 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 SPANXDQ9BXN6 97 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
ACTN1-208ENST00000553370 E9PLD3 99 aa5.42□□□□□ -1.54
ACTN1-208ENST00000553370 H7C2G1 150 aa5.42□□□□□ -1.54
ACTN1-208ENST00000553370 COX6B2Q6YFQ2 88 aa5.42□□□□□ -1.54
ACTN1-208ENST00000553370 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
ACTN1-208ENST00000553370 PRO1933Q9H354 126 aa5.42□□□□□ -1.54
ACTN1-208ENST00000553370 ZNF815PA8K554 130 aa5.41□□□□□ -1.54
ACTN1-208ENST00000553370 M0R2T5 61 aa5.41□□□□□ -1.54
ACTN1-208ENST00000553370 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
ACTN1-208ENST00000553370 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 HSBP1L1C9JCN9 74 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 IGKV2-30P06310 120 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 SPRR1BP22528 89 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 C6orf99Q4VX62 202 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
ACTN1-208ENST00000553370 TEX49A0A1B0GTD5 131 aa5.39□□□□□ -1.55
ACTN1-208ENST00000553370 TIMM17BO60830 172 aa5.39□□□□□ -1.55
ACTN1-208ENST00000553370 ELOF1P60002 83 aaKnown RBP5.39□□□□□ -1.55
ACTN1-208ENST00000553370 COPS9Q8WXC6 57 aa5.39□□□□□ -1.55
ACTN1-208ENST00000553370 CD164Q04900 197 aa5.38□□□□□ -1.55
ACTN1-208ENST00000553370 SCGB1D4Q6XE38 83 aa5.38□□□□□ -1.55
ACTN1-208ENST00000553370 ATOH7Q8N100 152 aa5.37□□□□□ -1.55
ACTN1-208ENST00000553370 A6NDN8 102 aa5.36□□□□□ -1.55
ACTN1-208ENST00000553370 F8WEM9 126 aa5.36□□□□□ -1.55
ACTN1-208ENST00000553370 MT1HP80294 61 aa5.36□□□□□ -1.55
ACTN1-208ENST00000553370 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
ACTN1-208ENST00000553370 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
ACTN1-208ENST00000553370 TSTD3H0UI37 97 aa5.35□□□□□ -1.55
ACTN1-208ENST00000553370 DLEU1O43261 78 aa5.35□□□□□ -1.55
ACTN1-208ENST00000553370 TCL1BO95988 128 aa5.35□□□□□ -1.55
ACTN1-208ENST00000553370 LITAFQ99732 161 aa5.35□□□□□ -1.55
ACTN1-208ENST00000553370 NHP2Q9NX24 153 aaKnown RBP5.35□□□□□ -1.55
ACTN1-208ENST00000553370 COX8AP10176 69 aa5.34□□□□□ -1.55
ACTN1-208ENST00000553370 TTTY13Q9BZ97 58 aa5.34□□□□□ -1.55
ACTN1-208ENST00000553370 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
ACTN1-208ENST00000553370 UQCR10Q9UDW1 63 aa5.33□□□□□ -1.56
ACTN1-208ENST00000553370 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
ACTN1-208ENST00000553370 C1orf195Q5TG92 126 aa5.32□□□□□ -1.56
ACTN1-208ENST00000553370 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
ACTN1-208ENST00000553370 Q6ZVQ6 151 aa5.31□□□□□ -1.56
ACTN1-208ENST00000553370 SMIM29Q86T20 159 aa5.31□□□□□ -1.56
ACTN1-208ENST00000553370 C14orf144Q96I85 54 aa5.31□□□□□ -1.56
ACTN1-208ENST00000553370 IFITM1P13164 125 aa5.3□□□□□ -1.56
ACTN1-208ENST00000553370 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
ACTN1-208ENST00000553370 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
ACTN1-208ENST00000553370 Q5XG85 94 aa5.3□□□□□ -1.56
ACTN1-208ENST00000553370 Q6Q795 121 aa5.3□□□□□ -1.56
ACTN1-208ENST00000553370 PCP2Q8IVA1 136 aa5.3□□□□□ -1.56
ACTN1-208ENST00000553370 IGLV5-48A0A075B6I7 105 aa5.29□□□□□ -1.56
ACTN1-208ENST00000553370 TRAV13-2A0A0B4J235 113 aa5.29□□□□□ -1.56
ACTN1-208ENST00000553370 VAMP3Q15836 100 aa5.29□□□□□ -1.56
ACTN1-208ENST00000553370 HIGD1BQ9P298 99 aa5.29□□□□□ -1.56
ACTN1-208ENST00000553370 Q6ZVH6 145 aa5.28□□□□□ -1.56
ACTN1-208ENST00000553370 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
ACTN1-208ENST00000553370 MUSTN1Q8IVN3 82 aa5.26□□□□□ -1.57
ACTN1-208ENST00000553370 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
ACTN1-208ENST00000553370 PCP4L1A6NKN8 68 aa5.25□□□□□ -1.57
ACTN1-208ENST00000553370 Q6JHZ5 121 aa5.25□□□□□ -1.57
ACTN1-208ENST00000553370 C2orf91Q6ZV80 131 aa5.25□□□□□ -1.57
ACTN1-208ENST00000553370 SMIM11BQ8TCY0 68 aa5.25□□□□□ -1.57
ACTN1-208ENST00000553370 CLEC2BQ92478 149 aa5.24□□□□□ -1.57
ACTN1-208ENST00000553370 Q6ZQY7 126 aa5.23□□□□□ -1.57
ACTN1-208ENST00000553370 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
ACTN1-208ENST00000553370 OBSCN-AS1Q96MR7 158 aa5.23□□□□□ -1.57
ACTN1-208ENST00000553370 FAM218AQ96MZ4 157 aa5.23□□□□□ -1.57
ACTN1-208ENST00000553370 hADV29S1A0JD25 119 aa5.22□□□□□ -1.57
ACTN1-208ENST00000553370 HSD52Q0P140 79 aa5.22□□□□□ -1.57
ACTN1-208ENST00000553370 TRBV7-7A0A0K0K1E9 115 aa5.21□□□□□ -1.58
ACTN1-208ENST00000553370 M0R143 59 aa5.21□□□□□ -1.58
ACTN1-208ENST00000553370 HIST1H4GQ99525 98 aa5.21□□□□□ -1.58
ACTN1-208ENST00000553370 SNHG12Q9BXW3 62 aa5.21□□□□□ -1.58
ACTN1-208ENST00000553370 LST1O00453 97 aa5.2□□□□□ -1.58
ACTN1-208ENST00000553370 LINC00575Q6W349 94 aa5.2□□□□□ -1.58
ACTN1-208ENST00000553370 BVES-AS1Q5T3Y7 98 aa5.19□□□□□ -1.58
ACTN1-208ENST00000553370 IGFL1Q6UW32 110 aa5.19□□□□□ -1.58
ACTN1-208ENST00000553370 CEND1Q8N111 149 aa5.19□□□□□ -1.58
ACTN1-208ENST00000553370 Q96NJ1 140 aa5.19□□□□□ -1.58
ACTN1-208ENST00000553370 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
ACTN1-208ENST00000553370 OCIAD2Q56VL3 154 aa5.18□□□□□ -1.58
ACTN1-208ENST00000553370 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
ACTN1-208ENST00000553370 TRBV20-1A0A075B6N2 111 aa5.17□□□□□ -1.58
ACTN1-208ENST00000553370 SNCGO76070 127 aa5.17□□□□□ -1.58
ACTN1-208ENST00000553370 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
ACTN1-208ENST00000553370 H3BUT2 72 aa5.16□□□□□ -1.58
ACTN1-208ENST00000553370 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
ACTN1-208ENST00000553370 COL5A1-AS1Q5SY13 56 aa5.15□□□□□ -1.59
ACTN1-208ENST00000553370 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.59
ACTN1-208ENST00000553370 FAM236DA0A1B0GTK5 79 aa5.14□□□□□ -1.59
ACTN1-208ENST00000553370 CFC1P0CG37 223 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms