RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 COPS9Q8WXC6 57 aa6.1□□□□□ -1.43
NEK3-204ENST00000552973 C20orf202A1L168 122 aa6.08□□□□□ -1.44
NEK3-204ENST00000552973 A4D1N5 150 aa6.08□□□□□ -1.44
NEK3-204ENST00000552973 TCL1BO95988 128 aa6.08□□□□□ -1.44
NEK3-204ENST00000552973 TRAV13-2A0A0B4J235 113 aa6.07□□□□□ -1.44
NEK3-204ENST00000552973 Q6ZVH6 145 aa6.07□□□□□ -1.44
NEK3-204ENST00000552973 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
NEK3-204ENST00000552973 COA6Q5JTJ3 125 aaKnown RBP6.06□□□□□ -1.44
NEK3-204ENST00000552973 F8WEM9 126 aa6.05□□□□□ -1.44
NEK3-204ENST00000552973 VAMP3Q15836 100 aa6.04□□□□□ -1.44
NEK3-204ENST00000552973 Q6Q795 121 aa6.03□□□□□ -1.44
NEK3-204ENST00000552973 LINC00575Q6W349 94 aa6.03□□□□□ -1.44
NEK3-204ENST00000552973 Q6ZQY7 126 aa6.03□□□□□ -1.44
NEK3-204ENST00000552973 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
NEK3-204ENST00000552973 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
NEK3-204ENST00000552973 hADV29S1A0JD25 119 aa6.01□□□□□ -1.45
NEK3-204ENST00000552973 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
NEK3-204ENST00000552973 OCIAD2Q56VL3 154 aa5.99□□□□□ -1.45
NEK3-204ENST00000552973 Q6JHZ5 121 aa5.99□□□□□ -1.45
NEK3-204ENST00000552973 ATP11AUNQ6ZP68 121 aa5.99□□□□□ -1.45
NEK3-204ENST00000552973 CLEC2BQ92478 149 aa5.99□□□□□ -1.45
NEK3-204ENST00000552973 C12orf57Q99622 126 aa5.98□□□□□ -1.45
NEK3-204ENST00000552973 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
NEK3-204ENST00000552973 H3BUT2 72 aa5.96□□□□□ -1.46
NEK3-204ENST00000552973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.95□□□□□ -1.46
NEK3-204ENST00000552973 Q75L30 129 aa5.95□□□□□ -1.46
NEK3-204ENST00000552973 Q96NJ1 140 aa5.95□□□□□ -1.46
NEK3-204ENST00000552973 SNHG12Q9BXW3 62 aa5.95□□□□□ -1.46
NEK3-204ENST00000552973 HSBP1L1C9JCN9 74 aa5.94□□□□□ -1.46
NEK3-204ENST00000552973 LST1O00453 97 aa5.94□□□□□ -1.46
NEK3-204ENST00000552973 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
NEK3-204ENST00000552973 HIST3H2BBQ8N257 126 aa5.93□□□□□ -1.46
NEK3-204ENST00000552973 S100A2P29034 98 aa5.92□□□□□ -1.46
NEK3-204ENST00000552973 HIST1H2BLQ99880 126 aa5.92□□□□□ -1.46
NEK3-204ENST00000552973 BVES-AS1Q5T3Y7 98 aa5.91□□□□□ -1.46
NEK3-204ENST00000552973 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
NEK3-204ENST00000552973 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
NEK3-204ENST00000552973 SCGB1D1O95968 90 aa5.88□□□□□ -1.47
NEK3-204ENST00000552973 A0A087WSZ3 146 aa5.86□□□□□ -1.47
NEK3-204ENST00000552973 CFC1P0CG37 223 aa5.86□□□□□ -1.47
NEK3-204ENST00000552973 FAM218AQ96MZ4 157 aa5.86□□□□□ -1.47
NEK3-204ENST00000552973 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
NEK3-204ENST00000552973 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
NEK3-204ENST00000552973 TRBV20-1A0A075B6N2 111 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 A8MUU9 505 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
NEK3-204ENST00000552973 DSCR10P59022 87 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
NEK3-204ENST00000552973 H3BS24 57 aa5.84□□□□□ -1.47
NEK3-204ENST00000552973 COX8AP10176 69 aa5.84□□□□□ -1.47
NEK3-204ENST00000552973 SNCGO76070 127 aa5.83□□□□□ -1.48
NEK3-204ENST00000552973 S100A6P06703 90 aa5.83□□□□□ -1.48
NEK3-204ENST00000552973 C14orf144Q96I85 54 aa5.83□□□□□ -1.48
NEK3-204ENST00000552973 H0YGX0 51 aa5.82□□□□□ -1.48
NEK3-204ENST00000552973 H3BMG7 143 aa5.82□□□□□ -1.48
NEK3-204ENST00000552973 FABP2P12104 132 aa5.82□□□□□ -1.48
NEK3-204ENST00000552973 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
NEK3-204ENST00000552973 DLEU1O43261 78 aa5.8□□□□□ -1.48
NEK3-204ENST00000552973 SIGMAR1Q99720 223 aa5.8□□□□□ -1.48
NEK3-204ENST00000552973 A0A0B4J2C4 111 aa5.79□□□□□ -1.48
NEK3-204ENST00000552973 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
NEK3-204ENST00000552973 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.79□□□□□ -1.48
NEK3-204ENST00000552973 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
NEK3-204ENST00000552973 A0A1B0GV72 72 aa5.78□□□□□ -1.48
NEK3-204ENST00000552973 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
NEK3-204ENST00000552973 USH2AO75445 5202 aa5.77□□□□□ -1.49
NEK3-204ENST00000552973 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
NEK3-204ENST00000552973 LINC00313P59037 77 aa5.77□□□□□ -1.49
NEK3-204ENST00000552973 PAM16Q9Y3D7 125 aa5.77□□□□□ -1.49
NEK3-204ENST00000552973 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 HIGD1BQ9P298 99 aa5.76□□□□□ -1.49
NEK3-204ENST00000552973 MT2AP02795 61 aa5.75□□□□□ -1.49
NEK3-204ENST00000552973 CEND1Q8N111 149 aa5.75□□□□□ -1.49
NEK3-204ENST00000552973 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
NEK3-204ENST00000552973 A0A1B0GX51 115 aa5.74□□□□□ -1.49
NEK3-204ENST00000552973 ANKRD29Q8N6D5 301 aa5.74□□□□□ -1.49
NEK3-204ENST00000552973 TRIAP1O43715 76 aa5.73□□□□□ -1.49
NEK3-204ENST00000552973 MT1FP04733 61 aa5.72□□□□□ -1.49
NEK3-204ENST00000552973 HRES1P13985 223 aa5.72□□□□□ -1.49
NEK3-204ENST00000552973 FXYD2P54710 66 aa5.72□□□□□ -1.49
NEK3-204ENST00000552973 VAMP8Q9BV40 100 aa5.71□□□□□ -1.5
NEK3-204ENST00000552973 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.5
NEK3-204ENST00000552973 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
NEK3-204ENST00000552973 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
NEK3-204ENST00000552973 S100A1P23297 94 aa5.7□□□□□ -1.5
NEK3-204ENST00000552973 ORMDL1Q9P0S3 153 aa5.7□□□□□ -1.5
NEK3-204ENST00000552973 DNAL4O96015 105 aa5.69□□□□□ -1.5
NEK3-204ENST00000552973 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
NEK3-204ENST00000552973 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
NEK3-204ENST00000552973 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
NEK3-204ENST00000552973 CCKP06307 115 aa5.68□□□□□ -1.5
NEK3-204ENST00000552973 PSMB2P49721 201 aa5.68□□□□□ -1.5
NEK3-204ENST00000552973 K7ERJ3 54 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms