RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
PRPF40B-212ENST00000551111 COA6Q5JTJ3 125 aaKnown RBP6.03□□□□□ -1.44
PRPF40B-212ENST00000551111 A4D1N5 150 aa6.01□□□□□ -1.45
PRPF40B-212ENST00000551111 TCL1BO95988 128 aa6.01□□□□□ -1.45
PRPF40B-212ENST00000551111 IGFL1Q6UW32 110 aa6.01□□□□□ -1.45
PRPF40B-212ENST00000551111 LINC00575Q6W349 94 aa6.01□□□□□ -1.45
PRPF40B-212ENST00000551111 TRAV13-2A0A0B4J235 113 aa6□□□□□ -1.45
PRPF40B-212ENST00000551111 Q6ZQY7 126 aa6□□□□□ -1.45
PRPF40B-212ENST00000551111 Q6ZVH6 145 aa6□□□□□ -1.45
PRPF40B-212ENST00000551111 OBSCN-AS1Q96MR7 158 aa6□□□□□ -1.45
PRPF40B-212ENST00000551111 TRBV7-7A0A0K0K1E9 115 aa5.98□□□□□ -1.45
PRPF40B-212ENST00000551111 Q6Q795 121 aa5.98□□□□□ -1.45
PRPF40B-212ENST00000551111 COPS9Q8WXC6 57 aa5.98□□□□□ -1.45
PRPF40B-212ENST00000551111 NHP2Q9NX24 153 aaKnown RBP5.98□□□□□ -1.45
PRPF40B-212ENST00000551111 USH2AO75445 5202 aa5.97□□□□□ -1.45
PRPF40B-212ENST00000551111 hADV29S1A0JD25 119 aa5.96□□□□□ -1.46
PRPF40B-212ENST00000551111 C20orf202A1L168 122 aa5.96□□□□□ -1.46
PRPF40B-212ENST00000551111 F8WEM9 126 aa5.96□□□□□ -1.46
PRPF40B-212ENST00000551111 OCIAD2Q56VL3 154 aa5.96□□□□□ -1.46
PRPF40B-212ENST00000551111 CLEC2BQ92478 149 aa5.96□□□□□ -1.46
PRPF40B-212ENST00000551111 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
PRPF40B-212ENST00000551111 Q75L30 129 aa5.95□□□□□ -1.46
PRPF40B-212ENST00000551111 H3BUT2 72 aa5.94□□□□□ -1.46
PRPF40B-212ENST00000551111 VAMP3Q15836 100 aa5.94□□□□□ -1.46
PRPF40B-212ENST00000551111 Q6JHZ5 121 aa5.94□□□□□ -1.46
PRPF40B-212ENST00000551111 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
PRPF40B-212ENST00000551111 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
PRPF40B-212ENST00000551111 C12orf57Q99622 126 aa5.93□□□□□ -1.46
PRPF40B-212ENST00000551111 Q96NJ1 140 aa5.92□□□□□ -1.46
PRPF40B-212ENST00000551111 H3BS24 57 aa5.9□□□□□ -1.46
PRPF40B-212ENST00000551111 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
PRPF40B-212ENST00000551111 LST1O00453 97 aa5.89□□□□□ -1.47
PRPF40B-212ENST00000551111 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.89□□□□□ -1.47
PRPF40B-212ENST00000551111 HIST3H2BBQ8N257 126 aa5.89□□□□□ -1.47
PRPF40B-212ENST00000551111 SNRPEP62304 92 aaKnown RBP5.88□□□□□ -1.47
PRPF40B-212ENST00000551111 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
PRPF40B-212ENST00000551111 HIST1H2BLQ99880 126 aa5.88□□□□□ -1.47
PRPF40B-212ENST00000551111 SNHG12Q9BXW3 62 aa5.88□□□□□ -1.47
PRPF40B-212ENST00000551111 A8MUU9 505 aa5.87□□□□□ -1.47
PRPF40B-212ENST00000551111 KRTAP16-1A8MUX0 517 aa5.87□□□□□ -1.47
PRPF40B-212ENST00000551111 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
PRPF40B-212ENST00000551111 FAM218AQ96MZ4 157 aa5.86□□□□□ -1.47
PRPF40B-212ENST00000551111 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
PRPF40B-212ENST00000551111 DSCR10P59022 87 aa5.84□□□□□ -1.47
PRPF40B-212ENST00000551111 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.47
PRPF40B-212ENST00000551111 PPDPFLQ8WWR9 84 aa5.84□□□□□ -1.47
PRPF40B-212ENST00000551111 HIST1H4GQ99525 98 aa5.84□□□□□ -1.47
PRPF40B-212ENST00000551111 CFC1P0CG37 223 aa5.83□□□□□ -1.48
PRPF40B-212ENST00000551111 FCGBPQ9Y6R7 5405 aaPredicted RBP5.82□□□□□ -1.48
PRPF40B-212ENST00000551111 A0A087WSZ3 146 aa5.82□□□□□ -1.48
PRPF40B-212ENST00000551111 HSBP1L1C9JCN9 74 aa5.82□□□□□ -1.48
PRPF40B-212ENST00000551111 MT2AP02795 61 aa5.82□□□□□ -1.48
PRPF40B-212ENST00000551111 NDUFV3P56181 108 aaKnown RBP5.81□□□□□ -1.48
PRPF40B-212ENST00000551111 TEN1Q86WV5 123 aa5.81□□□□□ -1.48
PRPF40B-212ENST00000551111 COX8AP10176 69 aa5.8□□□□□ -1.48
PRPF40B-212ENST00000551111 S100A2P29034 98 aa5.8□□□□□ -1.48
PRPF40B-212ENST00000551111 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
PRPF40B-212ENST00000551111 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
PRPF40B-212ENST00000551111 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
PRPF40B-212ENST00000551111 MT1FP04733 61 aa5.79□□□□□ -1.48
PRPF40B-212ENST00000551111 SS18L2Q9UHA2 77 aa5.79□□□□□ -1.48
PRPF40B-212ENST00000551111 TRBV20-1A0A075B6N2 111 aa5.77□□□□□ -1.49
PRPF40B-212ENST00000551111 H3BMG7 143 aa5.77□□□□□ -1.49
PRPF40B-212ENST00000551111 C14orf144Q96I85 54 aa5.77□□□□□ -1.49
PRPF40B-212ENST00000551111 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
PRPF40B-212ENST00000551111 TMA7Q9Y2S6 64 aaKnown RBP5.76□□□□□ -1.49
PRPF40B-212ENST00000551111 HRES1P13985 223 aa5.75□□□□□ -1.49
PRPF40B-212ENST00000551111 KRTAP19-1Q8IUB9 90 aa5.75□□□□□ -1.49
PRPF40B-212ENST00000551111 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
PRPF40B-212ENST00000551111 RAB37Q96AX2 223 aa5.75□□□□□ -1.49
PRPF40B-212ENST00000551111 SIGMAR1Q99720 223 aa5.75□□□□□ -1.49
PRPF40B-212ENST00000551111 A0A0B4J2C4 111 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 A0A1B0GV72 72 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 H0YGX0 51 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 DLEU1O43261 78 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 FABP2P12104 132 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 DEFB116Q30KQ4 102 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 C2orf91Q6ZV80 131 aa5.74□□□□□ -1.49
PRPF40B-212ENST00000551111 LINC00313P59037 77 aa5.73□□□□□ -1.49
PRPF40B-212ENST00000551111 FAM236DA0A1B0GTK5 79 aa5.72□□□□□ -1.49
PRPF40B-212ENST00000551111 IGKV4-1P06312 121 aa5.72□□□□□ -1.49
PRPF40B-212ENST00000551111 FAM236CP0DP71 79 aa5.72□□□□□ -1.49
PRPF40B-212ENST00000551111 S100A6P06703 90 aa5.71□□□□□ -1.5
PRPF40B-212ENST00000551111 HIGD1BQ9P298 99 aa5.71□□□□□ -1.5
PRPF40B-212ENST00000551111 PAM16Q9Y3D7 125 aa5.71□□□□□ -1.5
PRPF40B-212ENST00000551111 TRIAP1O43715 76 aa5.7□□□□□ -1.5
PRPF40B-212ENST00000551111 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
PRPF40B-212ENST00000551111 SNCGO76070 127 aa5.69□□□□□ -1.5
PRPF40B-212ENST00000551111 FXYD2P54710 66 aa5.69□□□□□ -1.5
PRPF40B-212ENST00000551111 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
PRPF40B-212ENST00000551111 CEND1Q8N111 149 aa5.69□□□□□ -1.5
PRPF40B-212ENST00000551111 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
PRPF40B-212ENST00000551111 PRO1854Q9UHT4 67 aa5.68□□□□□ -1.5
PRPF40B-212ENST00000551111 A0A1B0GX51 115 aa5.67□□□□□ -1.5
PRPF40B-212ENST00000551111 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
PRPF40B-212ENST00000551111 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
PRPF40B-212ENST00000551111 TRBV7-4A0A0J9YYF1 115 aa5.66□□□□□ -1.5
PRPF40B-212ENST00000551111 C21orf62-AS1Q17RA5 79 aa5.65□□□□□ -1.5
PRPF40B-212ENST00000551111 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
PRPF40B-212ENST00000551111 K7ERJ3 54 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms