RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DIRC1Q969H9 104 aa3.49□□□□□ -1.85
SCAF11-213ENST00000550629 APOBP04114 4563 aaKnown RBP3.48□□□□□ -1.85
SCAF11-213ENST00000550629 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 ZNF861PO60384 105 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 UBE2AP49459 152 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 VAMP3Q15836 100 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 SPINK6Q6UWN8 80 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 Q6ZRX8 168 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 SMIM11BQ8TCY0 68 aa3.48□□□□□ -1.85
SCAF11-213ENST00000550629 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
SCAF11-213ENST00000550629 INAFM2P0DMQ5 153 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 COX7BP24311 80 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 ELOF1P60002 83 aaKnown RBP3.47□□□□□ -1.85
SCAF11-213ENST00000550629 C6orf99Q4VX62 202 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 FAM19A1Q7Z5A9 133 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 DHRS4-AS1Q9P1J3 65 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 HERC2O95714 4834 aa3.47□□□□□ -1.85
SCAF11-213ENST00000550629 DNAH8Q96JB1 4490 aa3.46□□□□□ -1.86
SCAF11-213ENST00000550629 H0YGX0 51 aa3.46□□□□□ -1.86
SCAF11-213ENST00000550629 K7ERJ3 54 aa3.46□□□□□ -1.86
SCAF11-213ENST00000550629 PRLHP81277 87 aa3.46□□□□□ -1.86
SCAF11-213ENST00000550629 H7C2G1 150 aa3.45□□□□□ -1.86
SCAF11-213ENST00000550629 SNCGO76070 127 aa3.45□□□□□ -1.86
SCAF11-213ENST00000550629 TSPAN13O95857 204 aa3.45□□□□□ -1.86
SCAF11-213ENST00000550629 COX6CP09669 75 aa3.45□□□□□ -1.86
SCAF11-213ENST00000550629 Q1RN00 199 aa3.45□□□□□ -1.86
SCAF11-213ENST00000550629 ZNF706Q9Y5V0 76 aaPredicted RBP3.45□□□□□ -1.86
SCAF11-213ENST00000550629 HSPG2P98160 4391 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 SLC25A20O43772 301 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 PSMB2P49721 201 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 LINC00575Q6W349 94 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 SMCR5Q8TEV8 140 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 Q9BRP9 147 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 HIGD2AQ9BW72 106 aa3.44□□□□□ -1.86
SCAF11-213ENST00000550629 A0A1B0GX51 115 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 BATFQ16520 125 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 FAM229BQ4G0N7 80 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 LYRM7Q5U5X0 104 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 SNHG12Q9BXW3 62 aa3.43□□□□□ -1.86
SCAF11-213ENST00000550629 hADV29S1A0JD25 119 aa3.42□□□□□ -1.86
SCAF11-213ENST00000550629 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
SCAF11-213ENST00000550629 LINC00483Q53H64 154 aa3.42□□□□□ -1.86
SCAF11-213ENST00000550629 PPDPFLQ8WWR9 84 aa3.42□□□□□ -1.86
SCAF11-213ENST00000550629 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
SCAF11-213ENST00000550629 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 H3BQ85 93 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 ERC2-IT1O76042 136 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 OXTP01178 125 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 SPRR1BP22528 89 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 OCIAD2Q56VL3 154 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.41□□□□□ -1.86
SCAF11-213ENST00000550629 LINC01600Q96MT4 127 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 PCLOQ9Y6V0 5065 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
SCAF11-213ENST00000550629 ABCA13Q86UQ4 5058 aa3.4□□□□□ -1.86
SCAF11-213ENST00000550629 TRBV20-1A0A075B6N2 111 aa3.4□□□□□ -1.87
SCAF11-213ENST00000550629 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.87
SCAF11-213ENST00000550629 TAX1BP3O14907 124 aa3.4□□□□□ -1.87
SCAF11-213ENST00000550629 TRACP01848 142 aa3.4□□□□□ -1.87
SCAF11-213ENST00000550629 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
SCAF11-213ENST00000550629 FAT1Q14517 4588 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 LST1O00453 97 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 DNAL4O96015 105 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 CRYGAP11844 174 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 FABP2P12104 132 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 ATXN8Q156A1 80 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 Q6ZQY7 126 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 ST20-AS1Q8NBB2 130 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
SCAF11-213ENST00000550629 H3BUT2 72 aa3.38□□□□□ -1.87
SCAF11-213ENST00000550629 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SCAF11-213ENST00000550629 Q8N377 158 aa3.37□□□□□ -1.87
SCAF11-213ENST00000550629 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
SCAF11-213ENST00000550629 ORMDL1Q9P0S3 153 aa3.37□□□□□ -1.87
SCAF11-213ENST00000550629 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
SCAF11-213ENST00000550629 TMEM256-PLSCR3K7ERE1 68 aa3.36□□□□□ -1.87
SCAF11-213ENST00000550629 TCL1BO95988 128 aa3.36□□□□□ -1.87
SCAF11-213ENST00000550629 SSBP3-AS1Q7Z2R9 100 aa3.36□□□□□ -1.87
SCAF11-213ENST00000550629 DEFB105AQ8NG35 78 aa3.36□□□□□ -1.87
SCAF11-213ENST00000550629 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
SCAF11-213ENST00000550629 IGLV8-61A0A075B6I0 122 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 F8WEM9 126 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 MT1HL1P0DM35 61 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 KRTAP13-2Q52LG2 175 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 Q8NBF4 154 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
SCAF11-213ENST00000550629 FLG2Q5D862 2391 aaPredicted RBP3.34□□□□□ -1.87
SCAF11-213ENST00000550629 NDUFV3P56181 108 aaKnown RBP3.34□□□□□ -1.87
SCAF11-213ENST00000550629 Q6JHZ5 121 aa3.34□□□□□ -1.87
SCAF11-213ENST00000550629 SPAG11AQ6PDA7 123 aa3.34□□□□□ -1.87
SCAF11-213ENST00000550629 GTF2H5Q6ZYL4 71 aa3.34□□□□□ -1.87
SCAF11-213ENST00000550629 SPCS1Q9Y6A9 102 aa3.34□□□□□ -1.87
SCAF11-213ENST00000550629 DMBT1Q9UGM3 2413 aaPredicted RBP3.33□□□□□ -1.88
SCAF11-213ENST00000550629 H3BMG7 143 aa3.33□□□□□ -1.88
SCAF11-213ENST00000550629 H3BT86 120 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms