RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
VPS29-208ENST00000550267 SPANXCQ9NY87 97 aa5.32□□□□□ -1.56
VPS29-208ENST00000550267 PLNP26678 52 aa5.31□□□□□ -1.56
VPS29-208ENST00000550267 LINC00308Q8TCZ7 52 aa5.31□□□□□ -1.56
VPS29-208ENST00000550267 PMCHL2Q9BQD1 86 aa5.31□□□□□ -1.56
VPS29-208ENST00000550267 HSBP1O75506 76 aa5.3□□□□□ -1.56
VPS29-208ENST00000550267 C10orf91Q5T1B1 145 aa5.3□□□□□ -1.56
VPS29-208ENST00000550267 SPANXDQ9BXN6 97 aa5.3□□□□□ -1.56
VPS29-208ENST00000550267 IGLV5-48A0A075B6I7 105 aa5.29□□□□□ -1.56
VPS29-208ENST00000550267 DPM2O94777 84 aa5.29□□□□□ -1.56
VPS29-208ENST00000550267 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
VPS29-208ENST00000550267 LITAFQ99732 161 aa5.29□□□□□ -1.56
VPS29-208ENST00000550267 TRBV20-1A0A075B6N2 111 aa5.27□□□□□ -1.57
VPS29-208ENST00000550267 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
VPS29-208ENST00000550267 IGKCP01834 107 aa5.27□□□□□ -1.57
VPS29-208ENST00000550267 Q96NJ1 140 aa5.26□□□□□ -1.57
VPS29-208ENST00000550267 TRBV7-6A0A0J9YX20 115 aa5.25□□□□□ -1.57
VPS29-208ENST00000550267 E9PLD3 99 aa5.25□□□□□ -1.57
VPS29-208ENST00000550267 LINC00846Q9NV44 126 aa5.25□□□□□ -1.57
VPS29-208ENST00000550267 A0A1B0GWB2 263 aa5.24□□□□□ -1.57
VPS29-208ENST00000550267 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
VPS29-208ENST00000550267 LINC00518Q8N0U6 118 aa5.24□□□□□ -1.57
VPS29-208ENST00000550267 TIMM17BO60830 172 aa5.23□□□□□ -1.57
VPS29-208ENST00000550267 FABP4P15090 132 aa5.23□□□□□ -1.57
VPS29-208ENST00000550267 PCP4P48539 62 aa5.23□□□□□ -1.57
VPS29-208ENST00000550267 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
VPS29-208ENST00000550267 TRBV7-7A0A0K0K1E9 115 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 FAM236DA0A1B0GTK5 79 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 F8WEM9 126 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 FAM236CP0DP71 79 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 MT3P25713 68 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
VPS29-208ENST00000550267 SERF1AO75920 110 aa5.21□□□□□ -1.58
VPS29-208ENST00000550267 IGFL1Q6UW32 110 aa5.21□□□□□ -1.58
VPS29-208ENST00000550267 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
VPS29-208ENST00000550267 YPEL4Q96NS1 127 aa5.21□□□□□ -1.58
VPS29-208ENST00000550267 A8MUU9 505 aa5.2□□□□□ -1.58
VPS29-208ENST00000550267 CLEC2BQ92478 149 aa5.19□□□□□ -1.58
VPS29-208ENST00000550267 A6NDN8 102 aa5.18□□□□□ -1.58
VPS29-208ENST00000550267 ZNF815PA8K554 130 aa5.18□□□□□ -1.58
VPS29-208ENST00000550267 APOC3P02656 99 aa5.18□□□□□ -1.58
VPS29-208ENST00000550267 TTTY13Q9BZ97 58 aa5.18□□□□□ -1.58
VPS29-208ENST00000550267 NHP2Q9NX24 153 aaKnown RBP5.18□□□□□ -1.58
VPS29-208ENST00000550267 A4D1N5 150 aa5.17□□□□□ -1.58
VPS29-208ENST00000550267 LST1O00453 97 aa5.17□□□□□ -1.58
VPS29-208ENST00000550267 Q6JHZ5 121 aa5.17□□□□□ -1.58
VPS29-208ENST00000550267 SNAPINO95295 136 aa5.16□□□□□ -1.58
VPS29-208ENST00000550267 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
VPS29-208ENST00000550267 TRGC2P03986 189 aa5.15□□□□□ -1.59
VPS29-208ENST00000550267 SLC7A5P1Q8MH63 180 aa5.15□□□□□ -1.59
VPS29-208ENST00000550267 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
VPS29-208ENST00000550267 SMIM11BQ8TCY0 68 aa5.15□□□□□ -1.59
VPS29-208ENST00000550267 TRAV13-2A0A0B4J235 113 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 HRES1P13985 223 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 OCIAD2Q56VL3 154 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 SVBPQ8N300 66 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
VPS29-208ENST00000550267 Q6ZQY7 126 aa5.13□□□□□ -1.59
VPS29-208ENST00000550267 DSCR10P59022 87 aa5.12□□□□□ -1.59
VPS29-208ENST00000550267 SYS1-DBNDD2H3BUS1 97 aa5.11□□□□□ -1.59
VPS29-208ENST00000550267 NDUFA5Q16718 116 aa5.11□□□□□ -1.59
VPS29-208ENST00000550267 LINC00575Q6W349 94 aa5.11□□□□□ -1.59
VPS29-208ENST00000550267 MUSTN1Q8IVN3 82 aa5.11□□□□□ -1.59
VPS29-208ENST00000550267 IFITM1P13164 125 aa5.1□□□□□ -1.59
VPS29-208ENST00000550267 SCGB1D4Q6XE38 83 aa5.1□□□□□ -1.59
VPS29-208ENST00000550267 COPS9Q8WXC6 57 aa5.1□□□□□ -1.59
VPS29-208ENST00000550267 NEBP20929 6669 aa5.1□□□□□ -1.59
VPS29-208ENST00000550267 hADV29S1A0JD25 119 aa5.09□□□□□ -1.59
VPS29-208ENST00000550267 H3BUT2 72 aa5.09□□□□□ -1.59
VPS29-208ENST00000550267 VAMP3Q15836 100 aa5.08□□□□□ -1.6
VPS29-208ENST00000550267 LINC01545Q5VT33 79 aa5.08□□□□□ -1.6
VPS29-208ENST00000550267 SS18L2Q9UHA2 77 aa5.08□□□□□ -1.6
VPS29-208ENST00000550267 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
VPS29-208ENST00000550267 Q6ZVH6 145 aa5.06□□□□□ -1.6
VPS29-208ENST00000550267 PET117Q6UWS5 81 aa5.05□□□□□ -1.6
VPS29-208ENST00000550267 SNHG12Q9BXW3 62 aa5.05□□□□□ -1.6
VPS29-208ENST00000550267 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.04□□□□□ -1.6
VPS29-208ENST00000550267 A0A087WSZ3 146 aa5.03□□□□□ -1.6
VPS29-208ENST00000550267 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
VPS29-208ENST00000550267 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
VPS29-208ENST00000550267 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
VPS29-208ENST00000550267 LINC00313P59037 77 aa5.02□□□□□ -1.61
VPS29-208ENST00000550267 TEN1Q86WV5 123 aa5.02□□□□□ -1.61
VPS29-208ENST00000550267 PPDPFLQ8WWR9 84 aa5.02□□□□□ -1.61
VPS29-208ENST00000550267 SIGMAR1Q99720 223 aa5.02□□□□□ -1.61
VPS29-208ENST00000550267 COLCA2A8K830 154 aa5.01□□□□□ -1.61
VPS29-208ENST00000550267 A8MWP4 228 aa5.01□□□□□ -1.61
VPS29-208ENST00000550267 MTURNQ8N3F0 131 aa5.01□□□□□ -1.61
VPS29-208ENST00000550267 C3orf79P0CE67 100 aa5□□□□□ -1.61
VPS29-208ENST00000550267 KRTAP10-5P60370 271 aa5□□□□□ -1.61
VPS29-208ENST00000550267 KRTDAPP60985 99 aa4.97□□□□□ -1.61
VPS29-208ENST00000550267 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
VPS29-208ENST00000550267 ATOH7Q8N100 152 aa4.97□□□□□ -1.61
VPS29-208ENST00000550267 IGKV4-1P06312 121 aa4.96□□□□□ -1.62
VPS29-208ENST00000550267 HIST1H2BKO60814 126 aa4.95□□□□□ -1.62
VPS29-208ENST00000550267 HIST1H2BJP06899 126 aa4.95□□□□□ -1.62
VPS29-208ENST00000550267 HIST1H2BOP23527 126 aa4.95□□□□□ -1.62
VPS29-208ENST00000550267 HIST1H2BBP33778 126 aa4.95□□□□□ -1.62
VPS29-208ENST00000550267 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms