RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
COL2A1-209ENST00000546974 DLEU1O43261 78 aa7.75□□□□□ -1.17
COL2A1-209ENST00000546974 COX8AP10176 69 aa7.75□□□□□ -1.17
COL2A1-209ENST00000546974 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
COL2A1-209ENST00000546974 TCL1BO95988 128 aa7.74□□□□□ -1.17
COL2A1-209ENST00000546974 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
COL2A1-209ENST00000546974 VAMP8Q9BV40 100 aa7.74□□□□□ -1.17
COL2A1-209ENST00000546974 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
COL2A1-209ENST00000546974 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
COL2A1-209ENST00000546974 F8WEM9 126 aa7.72□□□□□ -1.17
COL2A1-209ENST00000546974 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
COL2A1-209ENST00000546974 FLGP20930 4061 aaPredicted RBP7.71□□□□□ -1.18
COL2A1-209ENST00000546974 hADV29S1A0JD25 119 aa7.7□□□□□ -1.18
COL2A1-209ENST00000546974 MT1HP80294 61 aa7.7□□□□□ -1.18
COL2A1-209ENST00000546974 C14orf144Q96I85 54 aa7.7□□□□□ -1.18
COL2A1-209ENST00000546974 Q6JHZ5 121 aa7.69□□□□□ -1.18
COL2A1-209ENST00000546974 Q6ZQY7 126 aa7.69□□□□□ -1.18
COL2A1-209ENST00000546974 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
COL2A1-209ENST00000546974 HIGD1BQ9P298 99 aa7.68□□□□□ -1.18
COL2A1-209ENST00000546974 CFC1BP0CG36 223 aa7.66□□□□□ -1.18
COL2A1-209ENST00000546974 CLEC2BQ92478 149 aa7.66□□□□□ -1.18
COL2A1-209ENST00000546974 TRBV7-7A0A0K0K1E9 115 aa7.65□□□□□ -1.18
COL2A1-209ENST00000546974 OCIAD2Q56VL3 154 aa7.65□□□□□ -1.18
COL2A1-209ENST00000546974 IGFL1Q6UW32 110 aa7.65□□□□□ -1.18
COL2A1-209ENST00000546974 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.65□□□□□ -1.18
COL2A1-209ENST00000546974 C12orf57Q99622 126 aa7.65□□□□□ -1.18
COL2A1-209ENST00000546974 BVES-AS1Q5T3Y7 98 aa7.64□□□□□ -1.19
COL2A1-209ENST00000546974 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
COL2A1-209ENST00000546974 HIST1H4GQ99525 98 aa7.63□□□□□ -1.19
COL2A1-209ENST00000546974 UQCR10Q9UDW1 63 aa7.63□□□□□ -1.19
COL2A1-209ENST00000546974 SNHG12Q9BXW3 62 aa7.6□□□□□ -1.19
COL2A1-209ENST00000546974 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
COL2A1-209ENST00000546974 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
COL2A1-209ENST00000546974 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
COL2A1-209ENST00000546974 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
COL2A1-209ENST00000546974 COX6B2Q6YFQ2 88 aa7.57□□□□□ -1.2
COL2A1-209ENST00000546974 LST1O00453 97 aa7.56□□□□□ -1.2
COL2A1-209ENST00000546974 CFC1P0CG37 223 aa7.56□□□□□ -1.2
COL2A1-209ENST00000546974 Q75L30 129 aa7.56□□□□□ -1.2
COL2A1-209ENST00000546974 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
COL2A1-209ENST00000546974 H3BUT2 72 aa7.55□□□□□ -1.2
COL2A1-209ENST00000546974 M0R2T5 61 aa7.55□□□□□ -1.2
COL2A1-209ENST00000546974 HSD52Q0P140 79 aa7.55□□□□□ -1.2
COL2A1-209ENST00000546974 CEND1Q8N111 149 aa7.55□□□□□ -1.2
COL2A1-209ENST00000546974 H0YGX0 51 aa7.54□□□□□ -1.2
COL2A1-209ENST00000546974 SNCGO76070 127 aa7.54□□□□□ -1.2
COL2A1-209ENST00000546974 Q6Q795 121 aa7.54□□□□□ -1.2
COL2A1-209ENST00000546974 ATP11AUNQ6ZP68 121 aa7.54□□□□□ -1.2
COL2A1-209ENST00000546974 RAB37Q96AX2 223 aa7.54□□□□□ -1.2
COL2A1-209ENST00000546974 FXYD2P54710 66 aa7.53□□□□□ -1.2
COL2A1-209ENST00000546974 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
COL2A1-209ENST00000546974 A0A0B4J2C4 111 aa7.52□□□□□ -1.21
COL2A1-209ENST00000546974 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
COL2A1-209ENST00000546974 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
COL2A1-209ENST00000546974 NDUFV3P56181 108 aaKnown RBP7.5□□□□□ -1.21
COL2A1-209ENST00000546974 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
COL2A1-209ENST00000546974 Q96NJ1 140 aa7.49□□□□□ -1.21
COL2A1-209ENST00000546974 A0A1B0GX51 115 aa7.47□□□□□ -1.21
COL2A1-209ENST00000546974 GHRHP01286 108 aa7.47□□□□□ -1.21
COL2A1-209ENST00000546974 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.22
COL2A1-209ENST00000546974 A0A087WSZ3 146 aa7.45□□□□□ -1.22
COL2A1-209ENST00000546974 H3BMG7 143 aa7.45□□□□□ -1.22
COL2A1-209ENST00000546974 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
COL2A1-209ENST00000546974 A6NJY4 79 aa7.44□□□□□ -1.22
COL2A1-209ENST00000546974 A8MUU9 505 aa7.44□□□□□ -1.22
COL2A1-209ENST00000546974 PRO1854Q9UHT4 67 aa7.44□□□□□ -1.22
COL2A1-209ENST00000546974 K7ERJ3 54 aa7.42□□□□□ -1.22
COL2A1-209ENST00000546974 M0R143 59 aa7.42□□□□□ -1.22
COL2A1-209ENST00000546974 FABP2P12104 132 aa7.42□□□□□ -1.22
COL2A1-209ENST00000546974 A0A1W2PNM2 257 aa7.39□□□□□ -1.23
COL2A1-209ENST00000546974 TRIAP1O43715 76 aa7.39□□□□□ -1.23
COL2A1-209ENST00000546974 H3BQ85 93 aa7.37□□□□□ -1.23
COL2A1-209ENST00000546974 DSCR10P59022 87 aa7.37□□□□□ -1.23
COL2A1-209ENST00000546974 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 DNAL4O96015 105 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 SIGMAR1Q99720 223 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
COL2A1-209ENST00000546974 LINC00313P59037 77 aa7.34□□□□□ -1.23
COL2A1-209ENST00000546974 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
COL2A1-209ENST00000546974 IGKV4-1P06312 121 aa7.32□□□□□ -1.24
COL2A1-209ENST00000546974 PSMB2P49721 201 aa7.32□□□□□ -1.24
COL2A1-209ENST00000546974 TAX1BP3O14907 124 aa7.31□□□□□ -1.24
COL2A1-209ENST00000546974 COX6CP09669 75 aa7.31□□□□□ -1.24
COL2A1-209ENST00000546974 PCP4L1A6NKN8 68 aa7.3□□□□□ -1.24
COL2A1-209ENST00000546974 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
COL2A1-209ENST00000546974 A0A1B0GV72 72 aa7.29□□□□□ -1.24
COL2A1-209ENST00000546974 BATFQ16520 125 aa7.29□□□□□ -1.24
COL2A1-209ENST00000546974 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
COL2A1-209ENST00000546974 LINC00472Q9H8W2 130 aa7.28□□□□□ -1.24
COL2A1-209ENST00000546974 TRACP01848 142 aa7.27□□□□□ -1.25
COL2A1-209ENST00000546974 CCKP06307 115 aa7.27□□□□□ -1.25
COL2A1-209ENST00000546974 UBE2V1Q13404 147 aa7.27□□□□□ -1.25
COL2A1-209ENST00000546974 USH2AO75445 5202 aa7.26□□□□□ -1.25
COL2A1-209ENST00000546974 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
COL2A1-209ENST00000546974 DEFB116Q30KQ4 102 aa7.26□□□□□ -1.25
COL2A1-209ENST00000546974 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
COL2A1-209ENST00000546974 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
COL2A1-209ENST00000546974 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 478 ms