RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
PTCH1-212ENST00000546744 IGLV5-37A0A075B6J1 123 aa8.39□□□□□ -1.07
PTCH1-212ENST00000546744 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
PTCH1-212ENST00000546744 UBR5O95071 2799 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-212ENST00000546744 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
PTCH1-212ENST00000546744 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
PTCH1-212ENST00000546744 DCHS2Q6V1P9 2916 aa8.37□□□□□ -1.07
PTCH1-212ENST00000546744 PHF5AQ7RTV0 110 aaKnown RBP8.37□□□□□ -1.07
PTCH1-212ENST00000546744 LINC01558Q9Y6Z2 57 aa8.37□□□□□ -1.07
PTCH1-212ENST00000546744 CR1P17927 2039 aa8.37□□□□□ -1.07
PTCH1-212ENST00000546744 TEX15Q9BXT5 2789 aa8.36□□□□□ -1.07
PTCH1-212ENST00000546744 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
PTCH1-212ENST00000546744 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
PTCH1-212ENST00000546744 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-212ENST00000546744 LINC01554Q52M75 96 aa8.34□□□□□ -1.07
PTCH1-212ENST00000546744 BSNQ9UPA5 3926 aa8.34□□□□□ -1.07
PTCH1-212ENST00000546744 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
PTCH1-212ENST00000546744 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
PTCH1-212ENST00000546744 FAM104AQ969W3 186 aa8.33□□□□□ -1.08
PTCH1-212ENST00000546744 SMG1Q96Q15 3661 aaKnown RBP8.32□□□□□ -1.08
PTCH1-212ENST00000546744 GIG44P09565 113 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-212ENST00000546744 APCP25054 2843 aa8.32□□□□□ -1.08
PTCH1-212ENST00000546744 DSCR10P59022 87 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 CYSTM1Q9H1C7 97 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 LINC00588Q9Y4M8 146 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 LY6G6CO95867 125 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 SPACA4Q8TDM5 124 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
PTCH1-212ENST00000546744 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
PTCH1-212ENST00000546744 SPENQ96T58 3664 aaKnown RBP8.3□□□□□ -1.08
PTCH1-212ENST00000546744 ASB16-AS1Q495Z4 193 aa8.3□□□□□ -1.08
PTCH1-212ENST00000546744 KRTAP1-1Q07627 177 aa8.3□□□□□ -1.08
PTCH1-212ENST00000546744 ZANQ9Y493 2812 aa8.3□□□□□ -1.08
PTCH1-212ENST00000546744 CELSR2Q9HCU4 2923 aa8.29□□□□□ -1.08
PTCH1-212ENST00000546744 GCN1Q92616 2671 aaKnown RBP8.29□□□□□ -1.08
PTCH1-212ENST00000546744 FAM168BA1KXE4 195 aa8.27□□□□□ -1.08
PTCH1-212ENST00000546744 ASH1LQ9NR48 2969 aaKnown RBP8.27□□□□□ -1.09
PTCH1-212ENST00000546744 OXTP01178 125 aa8.25□□□□□ -1.09
PTCH1-212ENST00000546744 Q5VV11 94 aa8.25□□□□□ -1.09
PTCH1-212ENST00000546744 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
PTCH1-212ENST00000546744 FAM229BQ4G0N7 80 aa8.23□□□□□ -1.09
PTCH1-212ENST00000546744 ZNF861PO60384 105 aa8.23□□□□□ -1.09
PTCH1-212ENST00000546744 CNBPP62633 177 aaKnown RBP8.22□□□□□ -1.09
PTCH1-212ENST00000546744 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
PTCH1-212ENST00000546744 Q96NJ1 140 aa8.2□□□□□ -1.1
PTCH1-212ENST00000546744 RTL8CO15255 209 aa8.2□□□□□ -1.1
PTCH1-212ENST00000546744 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
PTCH1-212ENST00000546744 KMT2BQ9UMN6 2715 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-212ENST00000546744 BAHCC1Q9P281 2608 aa8.2□□□□□ -1.1
PTCH1-212ENST00000546744 PRR26Q8N8Z3 221 aa8.18□□□□□ -1.1
PTCH1-212ENST00000546744 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
PTCH1-212ENST00000546744 FBN2P35556 2912 aa8.17□□□□□ -1.1
PTCH1-212ENST00000546744 H3BS24 57 aa8.16□□□□□ -1.1
PTCH1-212ENST00000546744 TENM4Q6N022 2769 aa8.16□□□□□ -1.1
PTCH1-212ENST00000546744 SPRR1AP35321 89 aa8.16□□□□□ -1.1
PTCH1-212ENST00000546744 STAB1Q9NY15 2570 aa8.13□□□□□ -1.11
PTCH1-212ENST00000546744 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
PTCH1-212ENST00000546744 SPRR1BP22528 89 aa8.1□□□□□ -1.11
PTCH1-212ENST00000546744 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
PTCH1-212ENST00000546744 KRTAP10-3P60369 221 aa8.09□□□□□ -1.11
PTCH1-212ENST00000546744 KRTAP24-1Q3LI83 254 aa8.08□□□□□ -1.12
PTCH1-212ENST00000546744 MXRA5Q9NR99 2828 aa8.07□□□□□ -1.12
PTCH1-212ENST00000546744 HIVEP1P15822 2718 aa8.07□□□□□ -1.12
PTCH1-212ENST00000546744 A0A0G2JQZ4 141 aa8.07□□□□□ -1.12
PTCH1-212ENST00000546744 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
PTCH1-212ENST00000546744 HRES1P13985 223 aa8.06□□□□□ -1.12
PTCH1-212ENST00000546744 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
PTCH1-212ENST00000546744 A0A1B0GU33 70 aa8.05□□□□□ -1.12
PTCH1-212ENST00000546744 NF1P21359 2839 aa8.05□□□□□ -1.12
PTCH1-212ENST00000546744 LUZP6Q538Z0 58 aa8.05□□□□□ -1.12
PTCH1-212ENST00000546744 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-212ENST00000546744 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
PTCH1-212ENST00000546744 APLNQ9ULZ1 77 aa8.04□□□□□ -1.12
PTCH1-212ENST00000546744 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
PTCH1-212ENST00000546744 PLA2G1BP04054 148 aaKnown RBP8.02□□□□□ -1.13
PTCH1-212ENST00000546744 CELSR1Q9NYQ6 3014 aa8.01□□□□□ -1.13
PTCH1-212ENST00000546744 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
PTCH1-212ENST00000546744 SPINK7P58062 85 aa8□□□□□ -1.13
PTCH1-212ENST00000546744 TNP2Q05952 138 aa8□□□□□ -1.13
PTCH1-212ENST00000546744 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
PTCH1-212ENST00000546744 COL6A5A8TX70 2615 aa7.99□□□□□ -1.13
PTCH1-212ENST00000546744 Q8NDZ9 215 aa7.99□□□□□ -1.13
PTCH1-212ENST00000546744 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
PTCH1-212ENST00000546744 LCE6AA0A183 80 aa7.97□□□□□ -1.13
PTCH1-212ENST00000546744 PDZD2O15018 2839 aa7.97□□□□□ -1.13
PTCH1-212ENST00000546744 A0A087WTM6 91 aa7.97□□□□□ -1.13
PTCH1-212ENST00000546744 A0A087X002 238 aa7.97□□□□□ -1.13
PTCH1-212ENST00000546744 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
PTCH1-212ENST00000546744 SVEP1Q4LDE5 3571 aa7.96□□□□□ -1.14
PTCH1-212ENST00000546744 NBEAL1Q6ZS30 2694 aa7.95□□□□□ -1.14
PTCH1-212ENST00000546744 Q6ZR54 194 aa7.94□□□□□ -1.14
PTCH1-212ENST00000546744 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
PTCH1-212ENST00000546744 CSMD1Q96PZ7 3565 aa7.93□□□□□ -1.14
PTCH1-212ENST00000546744 KRTAP29-1A8MX34 341 aaPredicted RBP7.92□□□□□ -1.14
PTCH1-212ENST00000546744 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
PTCH1-212ENST00000546744 Q8N1X5 172 aa7.9□□□□□ -1.14
PTCH1-212ENST00000546744 A6NN06 94 aa7.9□□□□□ -1.14
PTCH1-212ENST00000546744 NIPBLQ6KC79 2804 aaeCLIP7.89□□□□□ -1.15
PTCH1-212ENST00000546744 CASC10Q5T4H9 136 aa7.89□□□□□ -1.15
PTCH1-212ENST00000546744 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms