RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 HIST1H2BKO60814 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BJP06899 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 C3orf79P0CE67 100 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BOP23527 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BBP33778 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BDP58876 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BCP62807 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST2H2BEQ16778 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BHQ93079 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 C20orf166-AS1Q96NR2 134 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BNQ99877 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 HIST1H2BMQ99879 126 aa8.46□□□□□ -1.06
CPSF7-225ENST00000545934 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
CPSF7-225ENST00000545934 LINC00575Q6W349 94 aa8.45□□□□□ -1.06
CPSF7-225ENST00000545934 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
CPSF7-225ENST00000545934 LCE2BO14633 110 aa8.44□□□□□ -1.06
CPSF7-225ENST00000545934 OCIAD2Q56VL3 154 aa8.44□□□□□ -1.06
CPSF7-225ENST00000545934 Q96NJ1 140 aa8.44□□□□□ -1.06
CPSF7-225ENST00000545934 A8MUU9 505 aa8.43□□□□□ -1.06
CPSF7-225ENST00000545934 Q6ZQY7 126 aa8.43□□□□□ -1.06
CPSF7-225ENST00000545934 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
CPSF7-225ENST00000545934 hADV29S1A0JD25 119 aa8.4□□□□□ -1.06
CPSF7-225ENST00000545934 LST1O00453 97 aa8.4□□□□□ -1.06
CPSF7-225ENST00000545934 MT1FP04733 61 aa8.4□□□□□ -1.06
CPSF7-225ENST00000545934 VAMP3Q15836 100 aa8.4□□□□□ -1.06
CPSF7-225ENST00000545934 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
CPSF7-225ENST00000545934 SYNE2Q8WXH0 6885 aaKnown RBP8.4□□□□□ -1.07
CPSF7-225ENST00000545934 TRBV20-1A0A075B6N2 111 aa8.38□□□□□ -1.07
CPSF7-225ENST00000545934 KRTAP9-3Q9BYQ3 159 aa8.38□□□□□ -1.07
CPSF7-225ENST00000545934 KRTDAPP60985 99 aa8.37□□□□□ -1.07
CPSF7-225ENST00000545934 PPDPFLQ8WWR9 84 aa8.36□□□□□ -1.07
CPSF7-225ENST00000545934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-225ENST00000545934 COA6Q5JTJ3 125 aaKnown RBP8.33□□□□□ -1.08
CPSF7-225ENST00000545934 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
CPSF7-225ENST00000545934 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
CPSF7-225ENST00000545934 H3BUT2 72 aa8.32□□□□□ -1.08
CPSF7-225ENST00000545934 SS18L2Q9UHA2 77 aa8.32□□□□□ -1.08
CPSF7-225ENST00000545934 MPLKIPQ8TAP9 179 aa8.31□□□□□ -1.08
CPSF7-225ENST00000545934 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
CPSF7-225ENST00000545934 SNHG12Q9BXW3 62 aa8.29□□□□□ -1.08
CPSF7-225ENST00000545934 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
CPSF7-225ENST00000545934 HRES1P13985 223 aa8.26□□□□□ -1.09
CPSF7-225ENST00000545934 DSCR10P59022 87 aa8.26□□□□□ -1.09
CPSF7-225ENST00000545934 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
CPSF7-225ENST00000545934 FAM236DA0A1B0GTK5 79 aa8.25□□□□□ -1.09
CPSF7-225ENST00000545934 FAM236CP0DP71 79 aa8.25□□□□□ -1.09
CPSF7-225ENST00000545934 SNRPEP62304 92 aaKnown RBP8.25□□□□□ -1.09
CPSF7-225ENST00000545934 BVES-AS1Q5T3Y7 98 aa8.24□□□□□ -1.09
CPSF7-225ENST00000545934 A0A087WSZ3 146 aa8.22□□□□□ -1.09
CPSF7-225ENST00000545934 KRTAP19-6Q3LI70 58 aa8.22□□□□□ -1.09
CPSF7-225ENST00000545934 RBM12B-AS1Q9P1G2 102 aa8.2□□□□□ -1.1
CPSF7-225ENST00000545934 NDUFV3P56181 108 aaKnown RBP8.18□□□□□ -1.1
CPSF7-225ENST00000545934 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
CPSF7-225ENST00000545934 LINC00313P59037 77 aa8.17□□□□□ -1.1
CPSF7-225ENST00000545934 C12orf57Q99622 126 aa8.17□□□□□ -1.1
CPSF7-225ENST00000545934 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
CPSF7-225ENST00000545934 SIGMAR1Q99720 223 aa8.14□□□□□ -1.11
CPSF7-225ENST00000545934 A0A1W2PNM2 257 aa8.13□□□□□ -1.11
CPSF7-225ENST00000545934 FAM218AQ96MZ4 157 aa8.13□□□□□ -1.11
CPSF7-225ENST00000545934 H3BMG7 143 aa8.11□□□□□ -1.11
CPSF7-225ENST00000545934 H0YGX0 51 aa8.1□□□□□ -1.11
CPSF7-225ENST00000545934 IGKV4-1P06312 121 aa8.09□□□□□ -1.11
CPSF7-225ENST00000545934 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
CPSF7-225ENST00000545934 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
CPSF7-225ENST00000545934 SNCGO76070 127 aa8.07□□□□□ -1.12
CPSF7-225ENST00000545934 KRTAP6-3Q3LI67 103 aa8.07□□□□□ -1.12
CPSF7-225ENST00000545934 HIST1H2BLQ99880 126 aa8.05□□□□□ -1.12
CPSF7-225ENST00000545934 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
CPSF7-225ENST00000545934 TRBV7-4A0A0J9YYF1 115 aa8.04□□□□□ -1.12
CPSF7-225ENST00000545934 A0A1B0GX51 115 aa8.04□□□□□ -1.12
CPSF7-225ENST00000545934 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
CPSF7-225ENST00000545934 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
CPSF7-225ENST00000545934 GHRHP01286 108 aa8.03□□□□□ -1.12
CPSF7-225ENST00000545934 A0A0B4J2C4 111 aa8.02□□□□□ -1.13
CPSF7-225ENST00000545934 FABP2P12104 132 aa8.02□□□□□ -1.13
CPSF7-225ENST00000545934 COX8AP10176 69 aa8.01□□□□□ -1.13
CPSF7-225ENST00000545934 RAB37Q96AX2 223 aa8.01□□□□□ -1.13
CPSF7-225ENST00000545934 DEFB116Q30KQ4 102 aa8□□□□□ -1.13
CPSF7-225ENST00000545934 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
CPSF7-225ENST00000545934 A8MWP4 228 aa7.99□□□□□ -1.13
CPSF7-225ENST00000545934 DLEU1O43261 78 aa7.99□□□□□ -1.13
CPSF7-225ENST00000545934 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
CPSF7-225ENST00000545934 SPINK7P58062 85 aa7.96□□□□□ -1.14
CPSF7-225ENST00000545934 ZCCHC13Q8WW36 166 aaKnown RBP7.96□□□□□ -1.14
CPSF7-225ENST00000545934 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
CPSF7-225ENST00000545934 S100A2P29034 98 aa7.95□□□□□ -1.14
CPSF7-225ENST00000545934 NEBP20929 6669 aa7.94□□□□□ -1.14
CPSF7-225ENST00000545934 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
CPSF7-225ENST00000545934 HIGD1BQ9P298 99 aa7.93□□□□□ -1.14
CPSF7-225ENST00000545934 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-225ENST00000545934 CCKP06307 115 aa7.91□□□□□ -1.14
CPSF7-225ENST00000545934 A0A1B0GV72 72 aa7.9□□□□□ -1.14
CPSF7-225ENST00000545934 TRIAP1O43715 76 aa7.9□□□□□ -1.14
CPSF7-225ENST00000545934 C2orf91Q6ZV80 131 aa7.9□□□□□ -1.14
CPSF7-225ENST00000545934 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.14
CPSF7-225ENST00000545934 TRACP01848 142 aa7.89□□□□□ -1.15
CPSF7-225ENST00000545934 H3BQ85 93 aa7.88□□□□□ -1.15
CPSF7-225ENST00000545934 ORMDL1Q9P0S3 153 aa7.88□□□□□ -1.15
CPSF7-225ENST00000545934 C14orf144Q96I85 54 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms