RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
CHD4-213ENST00000545584 COX8AP10176 69 aa10.73□□□□□ -0.69
CHD4-213ENST00000545584 BVES-AS1Q5T3Y7 98 aa10.72□□□□□ -0.69
CHD4-213ENST00000545584 C12orf57Q99622 126 aa10.72□□□□□ -0.69
CHD4-213ENST00000545584 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.71□□□□□ -0.69
CHD4-213ENST00000545584 CLEC2BQ92478 149 aa10.7□□□□□ -0.7
CHD4-213ENST00000545584 OCIAD2Q56VL3 154 aa10.69□□□□□ -0.7
CHD4-213ENST00000545584 RPL37P61927 97 aaKnown RBP10.68□□□□□ -0.7
CHD4-213ENST00000545584 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
CHD4-213ENST00000545584 PPDPFLQ8WWR9 84 aa10.68□□□□□ -0.7
CHD4-213ENST00000545584 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
CHD4-213ENST00000545584 DLEU1O43261 78 aa10.67□□□□□ -0.7
CHD4-213ENST00000545584 IGFL1Q6UW32 110 aa10.67□□□□□ -0.7
CHD4-213ENST00000545584 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
CHD4-213ENST00000545584 SNHG12Q9BXW3 62 aa10.67□□□□□ -0.7
CHD4-213ENST00000545584 PAM16Q9Y3D7 125 aa10.66□□□□□ -0.7
CHD4-213ENST00000545584 KRTAP9-6A0A140TA67 174 aa10.64□□□□□ -0.71
CHD4-213ENST00000545584 SNCGO76070 127 aa10.64□□□□□ -0.71
CHD4-213ENST00000545584 KRTAP19-2Q3LHN2 52 aa10.63□□□□□ -0.71
CHD4-213ENST00000545584 SPATA45Q537H7 98 aa10.63□□□□□ -0.71
CHD4-213ENST00000545584 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
CHD4-213ENST00000545584 VAMP8Q9BV40 100 aa10.61□□□□□ -0.71
CHD4-213ENST00000545584 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
CHD4-213ENST00000545584 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
CHD4-213ENST00000545584 CFC1P0CG37 223 aa10.59□□□□□ -0.71
CHD4-213ENST00000545584 MT1HP80294 61 aa10.59□□□□□ -0.71
CHD4-213ENST00000545584 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
CHD4-213ENST00000545584 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
CHD4-213ENST00000545584 H0YGX0 51 aa10.57□□□□□ -0.72
CHD4-213ENST00000545584 H3BUT2 72 aa10.57□□□□□ -0.72
CHD4-213ENST00000545584 A0A0B4J2C4 111 aa10.56□□□□□ -0.72
CHD4-213ENST00000545584 LST1O00453 97 aa10.56□□□□□ -0.72
CHD4-213ENST00000545584 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
CHD4-213ENST00000545584 SS18L2Q9UHA2 77 aa10.53□□□□□ -0.72
CHD4-213ENST00000545584 OBSCN-AS1Q96MR7 158 aa10.52□□□□□ -0.73
CHD4-213ENST00000545584 GHRHP01286 108 aa10.51□□□□□ -0.73
CHD4-213ENST00000545584 ATP11AUNQ6ZP68 121 aa10.5□□□□□ -0.73
CHD4-213ENST00000545584 CEND1Q8N111 149 aa10.5□□□□□ -0.73
CHD4-213ENST00000545584 TMEM238LA0A1B0GVL6 79 aa10.49□□□□□ -0.73
CHD4-213ENST00000545584 A6NJY4 79 aa10.49□□□□□ -0.73
CHD4-213ENST00000545584 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
CHD4-213ENST00000545584 Q6Q795 121 aa10.49□□□□□ -0.73
CHD4-213ENST00000545584 FAM218AQ96MZ4 157 aa10.49□□□□□ -0.73
CHD4-213ENST00000545584 Q75L30 129 aa10.48□□□□□ -0.73
CHD4-213ENST00000545584 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
CHD4-213ENST00000545584 A0A1B0GX51 115 aa10.47□□□□□ -0.73
CHD4-213ENST00000545584 M0R2T5 61 aa10.47□□□□□ -0.73
CHD4-213ENST00000545584 PYY3Q5JQD4 70 aa10.47□□□□□ -0.73
CHD4-213ENST00000545584 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
CHD4-213ENST00000545584 FXYD2P54710 66 aa10.46□□□□□ -0.73
CHD4-213ENST00000545584 H3BMG7 143 aa10.44□□□□□ -0.74
CHD4-213ENST00000545584 FABP2P12104 132 aa10.44□□□□□ -0.74
CHD4-213ENST00000545584 Q96NJ1 140 aa10.44□□□□□ -0.74
CHD4-213ENST00000545584 A0A087WSZ3 146 aa10.42□□□□□ -0.74
CHD4-213ENST00000545584 TMA7Q9Y2S6 64 aaKnown RBP10.41□□□□□ -0.74
CHD4-213ENST00000545584 KRTAP10-6P60371 365 aaPredicted RBP10.4□□□□□ -0.74
CHD4-213ENST00000545584 LORP23490 312 aaPredicted RBP10.39□□□□□ -0.75
CHD4-213ENST00000545584 TRIAP1O43715 76 aa10.37□□□□□ -0.75
CHD4-213ENST00000545584 HSD52Q0P140 79 aa10.37□□□□□ -0.75
CHD4-213ENST00000545584 DNAL4O96015 105 aa10.36□□□□□ -0.75
CHD4-213ENST00000545584 CRCT1Q9UGL9 99 aa10.35□□□□□ -0.75
CHD4-213ENST00000545584 H3BQ85 93 aa10.34□□□□□ -0.75
CHD4-213ENST00000545584 K7ERJ3 54 aa10.34□□□□□ -0.75
CHD4-213ENST00000545584 C20orf166-AS1Q96NR2 134 aa10.34□□□□□ -0.75
CHD4-213ENST00000545584 PSMB2P49721 201 aa10.33□□□□□ -0.76
CHD4-213ENST00000545584 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
CHD4-213ENST00000545584 A0A1W2PNM2 257 aa10.32□□□□□ -0.76
CHD4-213ENST00000545584 ANKRD29Q8N6D5 301 aa10.32□□□□□ -0.76
CHD4-213ENST00000545584 A8MUU9 505 aa10.31□□□□□ -0.76
CHD4-213ENST00000545584 COX6CP09669 75 aa10.31□□□□□ -0.76
CHD4-213ENST00000545584 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
CHD4-213ENST00000545584 UQCR10Q9UDW1 63 aa10.3□□□□□ -0.76
CHD4-213ENST00000545584 FSIP2Q5CZC0 6907 aa10.28□□□□□ -0.76
CHD4-213ENST00000545584 DSCR10P59022 87 aa10.28□□□□□ -0.76
CHD4-213ENST00000545584 TRBV7-4A0A0J9YYF1 115 aa10.27□□□□□ -0.77
CHD4-213ENST00000545584 TMEM256-PLSCR3K7ERE1 68 aa10.27□□□□□ -0.77
CHD4-213ENST00000545584 A0A1B0GV72 72 aa10.26□□□□□ -0.77
CHD4-213ENST00000545584 TRBV20-1A0A075B6N2 111 aa10.25□□□□□ -0.77
CHD4-213ENST00000545584 IGKV4-1P06312 121 aa10.25□□□□□ -0.77
CHD4-213ENST00000545584 LINC00313P59037 77 aa10.24□□□□□ -0.77
CHD4-213ENST00000545584 FLGP20930 4061 aaPredicted RBP10.23□□□□□ -0.77
CHD4-213ENST00000545584 TRACP01848 142 aa10.21□□□□□ -0.77
CHD4-213ENST00000545584 CCKP06307 115 aa10.21□□□□□ -0.77
CHD4-213ENST00000545584 UBE2V1Q13404 147 aa10.2□□□□□ -0.78
CHD4-213ENST00000545584 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
CHD4-213ENST00000545584 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.78
CHD4-213ENST00000545584 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.78
CHD4-213ENST00000545584 KRTAP16-1A8MUX0 517 aa10.13□□□□□ -0.79
CHD4-213ENST00000545584 VPS25Q9BRG1 176 aa10.13□□□□□ -0.79
CHD4-213ENST00000545584 IGHV6-1A0A0B4J1U7 121 aa10.12□□□□□ -0.79
CHD4-213ENST00000545584 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
CHD4-213ENST00000545584 DSCR8Q96T75 97 aa10.11□□□□□ -0.79
CHD4-213ENST00000545584 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
CHD4-213ENST00000545584 FAM236DA0A1B0GTK5 79 aa10.09□□□□□ -0.79
CHD4-213ENST00000545584 FAM236CP0DP71 79 aa10.09□□□□□ -0.79
CHD4-213ENST00000545584 C8orf87E5RJ46 101 aa10.06□□□□□ -0.8
CHD4-213ENST00000545584 C21orf62-AS1Q17RA5 79 aa10.06□□□□□ -0.8
CHD4-213ENST00000545584 BAALC-AS2P0C853 105 aa10.05□□□□□ -0.8
CHD4-213ENST00000545584 RBM12B-AS1Q9P1G2 102 aa10.05□□□□□ -0.8
CHD4-213ENST00000545584 A0A1B0GVX0 72 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms