RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	OR13C6P	Q8NH95	151 aa		4.35	□□□□□ -1.71
SNHG1-223	ENST00000545440	DHRS4-AS1	Q9P1J3	65 aa		4.35	□□□□□ -1.71
SNHG1-223	ENST00000545440		A0A0U1RQV1	116 aa		4.34	□□□□□ -1.71
SNHG1-223	ENST00000545440	SPRR1B	P22528	89 aa		4.34	□□□□□ -1.71
SNHG1-223	ENST00000545440	ELOF1	P60002	83 aa	Known RBP	4.34	□□□□□ -1.71
SNHG1-223	ENST00000545440	C9orf153	Q5TBE3	101 aa		4.34	□□□□□ -1.71
SNHG1-223	ENST00000545440	TRBV7-6	A0A0J9YX20	115 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	S100A1	P23297	94 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	C6orf99	Q4VX62	202 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	SLC25A34	Q6PIV7	304 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	PCP2	Q8IVA1	136 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	HIST3H2BB	Q8N257	126 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440		Q8N377	158 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	ST20-AS1	Q8NBB2	130 aa		4.33	□□□□□ -1.72
SNHG1-223	ENST00000545440	COX7B	P24311	80 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440	S100A2	P29034	98 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440	KRTAP13-3	Q3SY46	172 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440	FAM218A	Q96MZ4	157 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440	HIST1H2BL	Q99880	126 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440	KRTAP9-8	Q9BYQ0	159 aa		4.32	□□□□□ -1.72
SNHG1-223	ENST00000545440		A0A1B0GWB2	263 aa		4.31	□□□□□ -1.72
SNHG1-223	ENST00000545440	SLC25A20	O43772	301 aa		4.31	□□□□□ -1.72
SNHG1-223	ENST00000545440	MUC2	Q02817	5179 aa		4.31	□□□□□ -1.72
SNHG1-223	ENST00000545440		A6NDN8	102 aa		4.3	□□□□□ -1.72
SNHG1-223	ENST00000545440	HSBP1L1	C9JCN9	74 aa		4.3	□□□□□ -1.72
SNHG1-223	ENST00000545440	MUSTN1	Q8IVN3	82 aa		4.3	□□□□□ -1.72
SNHG1-223	ENST00000545440	LAMTOR3	Q9UHA4	124 aa		4.3	□□□□□ -1.72
SNHG1-223	ENST00000545440	TRAV13-2	A0A0B4J235	113 aa		4.29	□□□□□ -1.72
SNHG1-223	ENST00000545440	S100A6	P06703	90 aa		4.29	□□□□□ -1.72
SNHG1-223	ENST00000545440	LIMD2	Q9BT23	127 aa		4.29	□□□□□ -1.72
SNHG1-223	ENST00000545440	MUC17	Q685J3	4493 aa		4.29	□□□□□ -1.72
SNHG1-223	ENST00000545440	IGLV5-48	A0A075B6I7	105 aa		4.28	□□□□□ -1.72
SNHG1-223	ENST00000545440	TEX49	A0A1B0GTD5	131 aa		4.28	□□□□□ -1.72
SNHG1-223	ENST00000545440	NHP2	Q9NX24	153 aa	Known RBP	4.28	□□□□□ -1.72
SNHG1-223	ENST00000545440	CD164	Q04900	197 aa		4.27	□□□□□ -1.73
SNHG1-223	ENST00000545440	TAL2	Q16559	108 aa		4.27	□□□□□ -1.73
SNHG1-223	ENST00000545440		Q1RN00	199 aa		4.27	□□□□□ -1.73
SNHG1-223	ENST00000545440	ASB16-AS1	Q495Z4	193 aa		4.27	□□□□□ -1.73
SNHG1-223	ENST00000545440	SMIM11B	Q8TCY0	68 aa		4.27	□□□□□ -1.73
SNHG1-223	ENST00000545440	DEFB105A	Q8NG35	78 aa		4.26	□□□□□ -1.73
SNHG1-223	ENST00000545440	OCR1	Q9BZK8	76 aa		4.26	□□□□□ -1.73
SNHG1-223	ENST00000545440	PRO1933	Q9H354	126 aa		4.26	□□□□□ -1.73
SNHG1-223	ENST00000545440	COX8A	P10176	69 aa		4.24	□□□□□ -1.73
SNHG1-223	ENST00000545440	NDUFV3	P56181	108 aa	Known RBP	4.24	□□□□□ -1.73
SNHG1-223	ENST00000545440	VAMP3	Q15836	100 aa		4.24	□□□□□ -1.73
SNHG1-223	ENST00000545440		Q5XG85	94 aa		4.24	□□□□□ -1.73
SNHG1-223	ENST00000545440	HRCT1	Q6UXD1	115 aa		4.24	□□□□□ -1.73
SNHG1-223	ENST00000545440		H7C2G1	150 aa		4.23	□□□□□ -1.73
SNHG1-223	ENST00000545440	DLEU1	O43261	78 aa		4.23	□□□□□ -1.73
SNHG1-223	ENST00000545440	LINC00575	Q6W349	94 aa		4.22	□□□□□ -1.73
SNHG1-223	ENST00000545440	HIST1H4G	Q99525	98 aa		4.22	□□□□□ -1.73
SNHG1-223	ENST00000545440		F8WEM9	126 aa		4.21	□□□□□ -1.74
SNHG1-223	ENST00000545440	BVES-AS1	Q5T3Y7	98 aa		4.21	□□□□□ -1.74
SNHG1-223	ENST00000545440	FAT4	Q6V0I7	4981 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440	hADV29S1	A0JD25	119 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440	KRTAP5-3	Q6L8H2	238 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440		Q6ZQY7	126 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440	C12orf57	Q99622	126 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440	HIGD1B	Q9P298	99 aa		4.2	□□□□□ -1.74
SNHG1-223	ENST00000545440	IGLV8-61	A0A075B6I0	122 aa		4.19	□□□□□ -1.74
SNHG1-223	ENST00000545440		Q6JHZ5	121 aa		4.19	□□□□□ -1.74
SNHG1-223	ENST00000545440	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.19	□□□□□ -1.74
SNHG1-223	ENST00000545440	PPDPFL	Q8WWR9	84 aa		4.19	□□□□□ -1.74
SNHG1-223	ENST00000545440		A0A0B4J2C4	111 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440		A0A0G2JQZ4	141 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	TCL1B	O95988	128 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	SPATA45	Q537H7	98 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	C1orf195	Q5TG92	126 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	CLEC2B	Q92478	149 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	VAMP8	Q9BV40	100 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	KRTAP4-1	Q9BYQ7	146 aa		4.18	□□□□□ -1.74
SNHG1-223	ENST00000545440	C9orf92	A6NGG3	77 aa		4.17	□□□□□ -1.74
SNHG1-223	ENST00000545440	C2orf91	Q6ZV80	131 aa		4.17	□□□□□ -1.74
SNHG1-223	ENST00000545440	C14orf144	Q96I85	54 aa		4.17	□□□□□ -1.74
SNHG1-223	ENST00000545440	IGFL1	Q6UW32	110 aa		4.16	□□□□□ -1.74
SNHG1-223	ENST00000545440	RAB37	Q96AX2	223 aa		4.16	□□□□□ -1.74
SNHG1-223	ENST00000545440	TRBV7-7	A0A0K0K1E9	115 aa		4.15	□□□□□ -1.75
SNHG1-223	ENST00000545440	SNCG	O76070	127 aa		4.15	□□□□□ -1.75
SNHG1-223	ENST00000545440	OCIAD2	Q56VL3	154 aa		4.15	□□□□□ -1.75
SNHG1-223	ENST00000545440	KRTAP2-2	Q9BYT5	123 aa		4.15	□□□□□ -1.75
SNHG1-223	ENST00000545440		H0YGX0	51 aa		4.14	□□□□□ -1.75
SNHG1-223	ENST00000545440	PCOTH	Q58A44	107 aa		4.14	□□□□□ -1.75
SNHG1-223	ENST00000545440	CEND1	Q8N111	149 aa		4.14	□□□□□ -1.75
SNHG1-223	ENST00000545440	SNHG12	Q9BXW3	62 aa		4.14	□□□□□ -1.75
SNHG1-223	ENST00000545440		A0A1B0GX51	115 aa		4.12	□□□□□ -1.75
SNHG1-223	ENST00000545440		H3BUT2	72 aa		4.12	□□□□□ -1.75
SNHG1-223	ENST00000545440	RPL37	P61927	97 aa	Known RBP	4.12	□□□□□ -1.75
SNHG1-223	ENST00000545440	PRO1854	Q9UHT4	67 aa		4.12	□□□□□ -1.75
SNHG1-223	ENST00000545440	FXYD2	P54710	66 aa		4.11	□□□□□ -1.75
SNHG1-223	ENST00000545440	PYY3	Q5JQD4	70 aa		4.11	□□□□□ -1.75
SNHG1-223	ENST00000545440		Q6Q795	121 aa		4.11	□□□□□ -1.75
SNHG1-223	ENST00000545440	SS18L2	Q9UHA2	77 aa		4.11	□□□□□ -1.75
SNHG1-223	ENST00000545440	HSD52	Q0P140	79 aa		4.1	□□□□□ -1.75
SNHG1-223	ENST00000545440	KRTAP19-2	Q3LHN2	52 aa		4.1	□□□□□ -1.75
SNHG1-223	ENST00000545440	KRTAP16-1	A8MUX0	517 aa		4.09	□□□□□ -1.75
SNHG1-223	ENST00000545440	TEN1	Q86WV5	123 aa		4.09	□□□□□ -1.75
SNHG1-223	ENST00000545440	LST1	O00453	97 aa		4.08	□□□□□ -1.76
SNHG1-223	ENST00000545440	DNAL4	O96015	105 aa		4.07	□□□□□ -1.76
SNHG1-223	ENST00000545440	UQCR10	Q9UDW1	63 aa		4.07	□□□□□ -1.76
SNHG1-223	ENST00000545440		H3BMG7	143 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms