RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
RTN3-214ENST00000545432 COPS9Q8WXC6 57 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 Q96NJ1 140 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
RTN3-214ENST00000545432 Q6JHZ5 121 aa7.31□□□□□ -1.24
RTN3-214ENST00000545432 NEBP20929 6669 aa7.29□□□□□ -1.24
RTN3-214ENST00000545432 CLEC2BQ92478 149 aa7.29□□□□□ -1.24
RTN3-214ENST00000545432 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
RTN3-214ENST00000545432 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
RTN3-214ENST00000545432 SCGB1D4Q6XE38 83 aa7.28□□□□□ -1.24
RTN3-214ENST00000545432 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
RTN3-214ENST00000545432 F8WEM9 126 aa7.26□□□□□ -1.25
RTN3-214ENST00000545432 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
RTN3-214ENST00000545432 KRTDAPP60985 99 aa7.26□□□□□ -1.25
RTN3-214ENST00000545432 Q6ZVH6 145 aa7.25□□□□□ -1.25
RTN3-214ENST00000545432 IFITM1P13164 125 aa7.24□□□□□ -1.25
RTN3-214ENST00000545432 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
RTN3-214ENST00000545432 TTTY13Q9BZ97 58 aa7.24□□□□□ -1.25
RTN3-214ENST00000545432 TRAV13-2A0A0B4J235 113 aa7.23□□□□□ -1.25
RTN3-214ENST00000545432 LST1O00453 97 aa7.23□□□□□ -1.25
RTN3-214ENST00000545432 HRES1P13985 223 aa7.23□□□□□ -1.25
RTN3-214ENST00000545432 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
RTN3-214ENST00000545432 A6NDN8 102 aa7.22□□□□□ -1.25
RTN3-214ENST00000545432 SMIM11BQ8TCY0 68 aa7.21□□□□□ -1.26
RTN3-214ENST00000545432 LINC00575Q6W349 94 aa7.2□□□□□ -1.26
RTN3-214ENST00000545432 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
RTN3-214ENST00000545432 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
RTN3-214ENST00000545432 ANKRD39Q53RE8 183 aa7.18□□□□□ -1.26
RTN3-214ENST00000545432 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
RTN3-214ENST00000545432 SNRPEP62304 92 aaKnown RBP7.17□□□□□ -1.26
RTN3-214ENST00000545432 Q6ZQY7 126 aa7.17□□□□□ -1.26
RTN3-214ENST00000545432 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
RTN3-214ENST00000545432 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
RTN3-214ENST00000545432 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
RTN3-214ENST00000545432 hADV29S1A0JD25 119 aa7.15□□□□□ -1.26
RTN3-214ENST00000545432 MUC12Q9UKN1 5478 aa7.15□□□□□ -1.27
RTN3-214ENST00000545432 VAMP3Q15836 100 aa7.14□□□□□ -1.27
RTN3-214ENST00000545432 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
RTN3-214ENST00000545432 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
RTN3-214ENST00000545432 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
RTN3-214ENST00000545432 SCGB1D1O95968 90 aa7.11□□□□□ -1.27
RTN3-214ENST00000545432 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.11□□□□□ -1.27
RTN3-214ENST00000545432 DSCR10P59022 87 aa7.1□□□□□ -1.27
RTN3-214ENST00000545432 H3BUT2 72 aa7.08□□□□□ -1.28
RTN3-214ENST00000545432 S100A2P29034 98 aa7.08□□□□□ -1.28
RTN3-214ENST00000545432 TEN1Q86WV5 123 aa7.08□□□□□ -1.28
RTN3-214ENST00000545432 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
RTN3-214ENST00000545432 A8MWP4 228 aa7.05□□□□□ -1.28
RTN3-214ENST00000545432 LINC00313P59037 77 aa7.05□□□□□ -1.28
RTN3-214ENST00000545432 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
RTN3-214ENST00000545432 A0A087WSZ3 146 aa7.03□□□□□ -1.28
RTN3-214ENST00000545432 HIST3H2BBQ8N257 126 aa7.03□□□□□ -1.28
RTN3-214ENST00000545432 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
RTN3-214ENST00000545432 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
RTN3-214ENST00000545432 MTURNQ8N3F0 131 aa7.02□□□□□ -1.29
RTN3-214ENST00000545432 S100A6P06703 90 aa7.01□□□□□ -1.29
RTN3-214ENST00000545432 HIST1H4GQ99525 98 aa7□□□□□ -1.29
RTN3-214ENST00000545432 SNCGO76070 127 aa6.99□□□□□ -1.29
RTN3-214ENST00000545432 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
RTN3-214ENST00000545432 C12orf57Q99622 126 aa6.96□□□□□ -1.3
RTN3-214ENST00000545432 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
RTN3-214ENST00000545432 COX8AP10176 69 aa6.94□□□□□ -1.3
RTN3-214ENST00000545432 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
RTN3-214ENST00000545432 A0A1W2PNM2 257 aa6.93□□□□□ -1.3
RTN3-214ENST00000545432 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
RTN3-214ENST00000545432 DLEU1O43261 78 aa6.92□□□□□ -1.3
RTN3-214ENST00000545432 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
RTN3-214ENST00000545432 S100A1P23297 94 aa6.92□□□□□ -1.3
RTN3-214ENST00000545432 H0YGX0 51 aa6.91□□□□□ -1.3
RTN3-214ENST00000545432 GHRHP01286 108 aa6.91□□□□□ -1.3
RTN3-214ENST00000545432 SPINK7P58062 85 aa6.91□□□□□ -1.3
RTN3-214ENST00000545432 LINC00472Q9H8W2 130 aa6.9□□□□□ -1.3
RTN3-214ENST00000545432 H3BMG7 143 aa6.89□□□□□ -1.31
RTN3-214ENST00000545432 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
RTN3-214ENST00000545432 KRTAP5-9P26371 169 aa6.87□□□□□ -1.31
RTN3-214ENST00000545432 ZCCHC13Q8WW36 166 aaKnown RBP6.87□□□□□ -1.31
RTN3-214ENST00000545432 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
RTN3-214ENST00000545432 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
RTN3-214ENST00000545432 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
RTN3-214ENST00000545432 A6NJY4 79 aa6.86□□□□□ -1.31
RTN3-214ENST00000545432 KMT2DO14686 5537 aa6.85□□□□□ -1.31
RTN3-214ENST00000545432 A0A1B0GX51 115 aa6.85□□□□□ -1.31
RTN3-214ENST00000545432 C14orf144Q96I85 54 aa6.85□□□□□ -1.31
RTN3-214ENST00000545432 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
RTN3-214ENST00000545432 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
RTN3-214ENST00000545432 FAM218AQ96MZ4 157 aa6.84□□□□□ -1.31
RTN3-214ENST00000545432 PAM16Q9Y3D7 125 aa6.84□□□□□ -1.31
RTN3-214ENST00000545432 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
RTN3-214ENST00000545432 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
RTN3-214ENST00000545432 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms