RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 Q6ZQY7 126 aa7.45□□□□□ -1.22
DDX55-213ENST00000545042 CEND1Q8N111 149 aa7.45□□□□□ -1.22
DDX55-213ENST00000545042 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
DDX55-213ENST00000545042 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.44□□□□□ -1.22
DDX55-213ENST00000545042 A0A0U1RQV1 116 aa7.41□□□□□ -1.22
DDX55-213ENST00000545042 H0YGX0 51 aa7.41□□□□□ -1.22
DDX55-213ENST00000545042 PPDPFLQ8WWR9 84 aa7.41□□□□□ -1.22
DDX55-213ENST00000545042 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
DDX55-213ENST00000545042 Q6JHZ5 121 aa7.39□□□□□ -1.23
DDX55-213ENST00000545042 SNHG12Q9BXW3 62 aa7.39□□□□□ -1.23
DDX55-213ENST00000545042 A0A0G2JQZ4 141 aa7.38□□□□□ -1.23
DDX55-213ENST00000545042 FXYD2P54710 66 aa7.38□□□□□ -1.23
DDX55-213ENST00000545042 HSD52Q0P140 79 aa7.38□□□□□ -1.23
DDX55-213ENST00000545042 Q5XG85 94 aa7.38□□□□□ -1.23
DDX55-213ENST00000545042 OCIAD2Q56VL3 154 aa7.37□□□□□ -1.23
DDX55-213ENST00000545042 TCL1BO95988 128 aa7.36□□□□□ -1.23
DDX55-213ENST00000545042 UQCR10Q9UDW1 63 aa7.36□□□□□ -1.23
DDX55-213ENST00000545042 IGLV8-61A0A075B6I0 122 aa7.35□□□□□ -1.23
DDX55-213ENST00000545042 GHRHP01286 108 aa7.35□□□□□ -1.23
DDX55-213ENST00000545042 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
DDX55-213ENST00000545042 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
DDX55-213ENST00000545042 A0A1B0GX51 115 aa7.34□□□□□ -1.23
DDX55-213ENST00000545042 MUC2Q02817 5179 aa7.33□□□□□ -1.24
DDX55-213ENST00000545042 ASB16-AS1Q495Z4 193 aa7.33□□□□□ -1.24
DDX55-213ENST00000545042 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
DDX55-213ENST00000545042 C1orf195Q5TG92 126 aa7.32□□□□□ -1.24
DDX55-213ENST00000545042 FAM218AQ96MZ4 157 aa7.32□□□□□ -1.24
DDX55-213ENST00000545042 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
DDX55-213ENST00000545042 TRIAP1O43715 76 aa7.31□□□□□ -1.24
DDX55-213ENST00000545042 PSMB2P49721 201 aa7.31□□□□□ -1.24
DDX55-213ENST00000545042 XP32Q5T750 250 aa7.31□□□□□ -1.24
DDX55-213ENST00000545042 TRBV7-7A0A0K0K1E9 115 aa7.3□□□□□ -1.24
DDX55-213ENST00000545042 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
DDX55-213ENST00000545042 COX6CP09669 75 aa7.3□□□□□ -1.24
DDX55-213ENST00000545042 H3BUT2 72 aa7.29□□□□□ -1.24
DDX55-213ENST00000545042 K7ERJ3 54 aa7.29□□□□□ -1.24
DDX55-213ENST00000545042 NDUFV3P56181 108 aaKnown RBP7.29□□□□□ -1.24
DDX55-213ENST00000545042 DNAL4O96015 105 aa7.28□□□□□ -1.24
DDX55-213ENST00000545042 FABP2P12104 132 aa7.28□□□□□ -1.24
DDX55-213ENST00000545042 H3BQ85 93 aa7.26□□□□□ -1.25
DDX55-213ENST00000545042 H3BMG7 143 aa7.25□□□□□ -1.25
DDX55-213ENST00000545042 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
DDX55-213ENST00000545042 SS18L2Q9UHA2 77 aa7.24□□□□□ -1.25
DDX55-213ENST00000545042 Q6Q795 121 aa7.23□□□□□ -1.25
DDX55-213ENST00000545042 TEN1Q86WV5 123 aa7.23□□□□□ -1.25
DDX55-213ENST00000545042 LST1O00453 97 aa7.22□□□□□ -1.25
DDX55-213ENST00000545042 SCGB1C2P0DMR2 95 aa7.22□□□□□ -1.25
DDX55-213ENST00000545042 TMEM256-PLSCR3K7ERE1 68 aa7.21□□□□□ -1.26
DDX55-213ENST00000545042 SMIM6P0DI80 62 aa7.21□□□□□ -1.26
DDX55-213ENST00000545042 M0R143 59 aa7.2□□□□□ -1.26
DDX55-213ENST00000545042 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
DDX55-213ENST00000545042 ANKRD29Q8N6D5 301 aa7.18□□□□□ -1.26
DDX55-213ENST00000545042 A0A087WSZ3 146 aa7.17□□□□□ -1.26
DDX55-213ENST00000545042 TRACP01848 142 aa7.17□□□□□ -1.26
DDX55-213ENST00000545042 KRTAP4-1Q9BYQ7 146 aa7.17□□□□□ -1.26
DDX55-213ENST00000545042 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.26
DDX55-213ENST00000545042 A0A1B0GV72 72 aa7.15□□□□□ -1.26
DDX55-213ENST00000545042 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.26
DDX55-213ENST00000545042 UBE2V1Q13404 147 aa7.15□□□□□ -1.26
DDX55-213ENST00000545042 TRBV7-4A0A0J9YYF1 115 aa7.13□□□□□ -1.27
DDX55-213ENST00000545042 A0A1W2PNM2 257 aa7.13□□□□□ -1.27
DDX55-213ENST00000545042 TSTD3H0UI37 97 aa7.13□□□□□ -1.27
DDX55-213ENST00000545042 OBSCN-AS1Q96MR7 158 aa7.13□□□□□ -1.27
DDX55-213ENST00000545042 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
DDX55-213ENST00000545042 CCKP06307 115 aa7.1□□□□□ -1.27
DDX55-213ENST00000545042 BAALC-AS2P0C853 105 aa7.09□□□□□ -1.27
DDX55-213ENST00000545042 RBM3P98179 157 aaKnown RBP7.09□□□□□ -1.27
DDX55-213ENST00000545042 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
DDX55-213ENST00000545042 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
DDX55-213ENST00000545042 Q96NJ1 140 aa7.08□□□□□ -1.28
DDX55-213ENST00000545042 SIGMAR1Q99720 223 aa7.08□□□□□ -1.28
DDX55-213ENST00000545042 LYRM7Q5U5X0 104 aa7.07□□□□□ -1.28
DDX55-213ENST00000545042 ATP11AUNQ6ZP68 121 aa7.07□□□□□ -1.28
DDX55-213ENST00000545042 Q75L30 129 aa7.07□□□□□ -1.28
DDX55-213ENST00000545042 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
DDX55-213ENST00000545042 BATFQ16520 125 aa7.06□□□□□ -1.28
DDX55-213ENST00000545042 VPS25Q9BRG1 176 aa7.06□□□□□ -1.28
DDX55-213ENST00000545042 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
DDX55-213ENST00000545042 IGKV4-1P06312 121 aa7.05□□□□□ -1.28
DDX55-213ENST00000545042 C9JAW5 83 aa7.04□□□□□ -1.28
DDX55-213ENST00000545042 C21orf62-AS1Q17RA5 79 aa7.03□□□□□ -1.28
DDX55-213ENST00000545042 TRBV20-1A0A075B6N2 111 aa7.01□□□□□ -1.29
DDX55-213ENST00000545042 JMJD7-PLA2G4BH0Y9G9 81 aa7.01□□□□□ -1.29
DDX55-213ENST00000545042 DSCR10P59022 87 aa7.01□□□□□ -1.29
DDX55-213ENST00000545042 LINC00313P59037 77 aa7□□□□□ -1.29
DDX55-213ENST00000545042 C20orf166-AS1Q96NR2 134 aa7□□□□□ -1.29
DDX55-213ENST00000545042 LINC00472Q9H8W2 130 aa7□□□□□ -1.29
DDX55-213ENST00000545042 DEFB116Q30KQ4 102 aa6.99□□□□□ -1.29
DDX55-213ENST00000545042 A8MUU9 505 aa6.98□□□□□ -1.29
DDX55-213ENST00000545042 PDE6GP18545 87 aa6.97□□□□□ -1.29
DDX55-213ENST00000545042 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
DDX55-213ENST00000545042 LOC110117498A0A087WWA1 95 aa6.96□□□□□ -1.3
DDX55-213ENST00000545042 C9orf118A6NHY6 69 aa6.96□□□□□ -1.3
DDX55-213ENST00000545042 KRTAP19-2Q3LHN2 52 aa6.96□□□□□ -1.3
DDX55-213ENST00000545042 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
DDX55-213ENST00000545042 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
DDX55-213ENST00000545042 A0A1B0GW54 56 aa6.95□□□□□ -1.3
DDX55-213ENST00000545042 J3KT08 172 aa6.95□□□□□ -1.3
DDX55-213ENST00000545042 Q6ZQT0 140 aa6.95□□□□□ -1.3
DDX55-213ENST00000545042 A0A1B0GVX0 72 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms