RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 COX8AP10176 69 aa7.11□□□□□ -1.27
TNFRSF1A-215ENST00000543359 VAMP3Q15836 100 aa7.11□□□□□ -1.27
TNFRSF1A-215ENST00000543359 SMIM6P0DI80 62 aa7.1□□□□□ -1.27
TNFRSF1A-215ENST00000543359 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
TNFRSF1A-215ENST00000543359 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
TNFRSF1A-215ENST00000543359 C12orf57Q99622 126 aa7.1□□□□□ -1.27
TNFRSF1A-215ENST00000543359 hADV29S1A0JD25 119 aa7.09□□□□□ -1.27
TNFRSF1A-215ENST00000543359 Q6ZQY7 126 aa7.09□□□□□ -1.27
TNFRSF1A-215ENST00000543359 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
TNFRSF1A-215ENST00000543359 PCOTHQ58A44 107 aa7.08□□□□□ -1.28
TNFRSF1A-215ENST00000543359 HIST1H4GQ99525 98 aa7.08□□□□□ -1.28
TNFRSF1A-215ENST00000543359 C14orf144Q96I85 54 aa7.06□□□□□ -1.28
TNFRSF1A-215ENST00000543359 CFC1BP0CG36 223 aa7.05□□□□□ -1.28
TNFRSF1A-215ENST00000543359 CFC1P0CG37 223 aa7.05□□□□□ -1.28
TNFRSF1A-215ENST00000543359 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.05□□□□□ -1.28
TNFRSF1A-215ENST00000543359 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
TNFRSF1A-215ENST00000543359 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
TNFRSF1A-215ENST00000543359 BVES-AS1Q5T3Y7 98 aa7.04□□□□□ -1.28
TNFRSF1A-215ENST00000543359 Q6JHZ5 121 aa7.04□□□□□ -1.28
TNFRSF1A-215ENST00000543359 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
TNFRSF1A-215ENST00000543359 C2orf91Q6ZV80 131 aa7.04□□□□□ -1.28
TNFRSF1A-215ENST00000543359 F8WEM9 126 aa7.03□□□□□ -1.28
TNFRSF1A-215ENST00000543359 TCL1BO95988 128 aa7.03□□□□□ -1.28
TNFRSF1A-215ENST00000543359 FLGP20930 4061 aaPredicted RBP7.02□□□□□ -1.28
TNFRSF1A-215ENST00000543359 TRBV7-7A0A0K0K1E9 115 aa7.02□□□□□ -1.29
TNFRSF1A-215ENST00000543359 PPDPFLQ8WWR9 84 aa7.02□□□□□ -1.29
TNFRSF1A-215ENST00000543359 PAM16Q9Y3D7 125 aa7.02□□□□□ -1.29
TNFRSF1A-215ENST00000543359 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
TNFRSF1A-215ENST00000543359 CLEC2BQ92478 149 aa7.01□□□□□ -1.29
TNFRSF1A-215ENST00000543359 RPL37P61927 97 aaKnown RBP7□□□□□ -1.29
TNFRSF1A-215ENST00000543359 PYY3Q5JQD4 70 aa7□□□□□ -1.29
TNFRSF1A-215ENST00000543359 A0A0B4J2C4 111 aa6.99□□□□□ -1.29
TNFRSF1A-215ENST00000543359 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
TNFRSF1A-215ENST00000543359 FAM218AQ96MZ4 157 aa6.99□□□□□ -1.29
TNFRSF1A-215ENST00000543359 H3BUT2 72 aa6.98□□□□□ -1.29
TNFRSF1A-215ENST00000543359 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
TNFRSF1A-215ENST00000543359 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
TNFRSF1A-215ENST00000543359 SNHG12Q9BXW3 62 aa6.97□□□□□ -1.29
TNFRSF1A-215ENST00000543359 H0YGX0 51 aa6.96□□□□□ -1.3
TNFRSF1A-215ENST00000543359 MT1HP80294 61 aa6.96□□□□□ -1.3
TNFRSF1A-215ENST00000543359 CEND1Q8N111 149 aa6.96□□□□□ -1.3
TNFRSF1A-215ENST00000543359 FXYD2P54710 66 aa6.94□□□□□ -1.3
TNFRSF1A-215ENST00000543359 Q6Q795 121 aa6.94□□□□□ -1.3
TNFRSF1A-215ENST00000543359 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
TNFRSF1A-215ENST00000543359 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
TNFRSF1A-215ENST00000543359 A0A1B0GX51 115 aa6.9□□□□□ -1.3
TNFRSF1A-215ENST00000543359 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.3
TNFRSF1A-215ENST00000543359 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
TNFRSF1A-215ENST00000543359 LST1O00453 97 aa6.89□□□□□ -1.31
TNFRSF1A-215ENST00000543359 TRIAP1O43715 76 aa6.89□□□□□ -1.31
TNFRSF1A-215ENST00000543359 TEN1Q86WV5 123 aa6.89□□□□□ -1.31
TNFRSF1A-215ENST00000543359 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
TNFRSF1A-215ENST00000543359 A6NJY4 79 aa6.88□□□□□ -1.31
TNFRSF1A-215ENST00000543359 SNCGO76070 127 aa6.88□□□□□ -1.31
TNFRSF1A-215ENST00000543359 Q75L30 129 aa6.88□□□□□ -1.31
TNFRSF1A-215ENST00000543359 H3BMG7 143 aa6.87□□□□□ -1.31
TNFRSF1A-215ENST00000543359 Q96NJ1 140 aa6.87□□□□□ -1.31
TNFRSF1A-215ENST00000543359 A0A087WSZ3 146 aa6.85□□□□□ -1.31
TNFRSF1A-215ENST00000543359 A0A1W2PNM2 257 aa6.85□□□□□ -1.31
TNFRSF1A-215ENST00000543359 TSTD3H0UI37 97 aa6.85□□□□□ -1.31
TNFRSF1A-215ENST00000543359 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
TNFRSF1A-215ENST00000543359 SS18L2Q9UHA2 77 aa6.85□□□□□ -1.31
TNFRSF1A-215ENST00000543359 K7ERJ3 54 aa6.84□□□□□ -1.31
TNFRSF1A-215ENST00000543359 FABP2P12104 132 aa6.84□□□□□ -1.31
TNFRSF1A-215ENST00000543359 HSD52Q0P140 79 aa6.84□□□□□ -1.31
TNFRSF1A-215ENST00000543359 GHRHP01286 108 aa6.83□□□□□ -1.32
TNFRSF1A-215ENST00000543359 KRTAP10-6P60371 365 aaPredicted RBP6.83□□□□□ -1.32
TNFRSF1A-215ENST00000543359 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
TNFRSF1A-215ENST00000543359 A8MUU9 505 aa6.81□□□□□ -1.32
TNFRSF1A-215ENST00000543359 ATP11AUNQ6ZP68 121 aa6.81□□□□□ -1.32
TNFRSF1A-215ENST00000543359 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
TNFRSF1A-215ENST00000543359 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
TNFRSF1A-215ENST00000543359 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
TNFRSF1A-215ENST00000543359 TRBV7-4A0A0J9YYF1 115 aa6.77□□□□□ -1.33
TNFRSF1A-215ENST00000543359 PSMB2P49721 201 aa6.77□□□□□ -1.33
TNFRSF1A-215ENST00000543359 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
TNFRSF1A-215ENST00000543359 ANKRD29Q8N6D5 301 aa6.77□□□□□ -1.33
TNFRSF1A-215ENST00000543359 H3BQ85 93 aa6.76□□□□□ -1.33
TNFRSF1A-215ENST00000543359 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
TNFRSF1A-215ENST00000543359 DNAL4O96015 105 aa6.76□□□□□ -1.33
TNFRSF1A-215ENST00000543359 DSCR10P59022 87 aa6.76□□□□□ -1.33
TNFRSF1A-215ENST00000543359 COX6CP09669 75 aa6.75□□□□□ -1.33
TNFRSF1A-215ENST00000543359 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
TNFRSF1A-215ENST00000543359 A0A1B0GV72 72 aa6.74□□□□□ -1.33
TNFRSF1A-215ENST00000543359 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
TNFRSF1A-215ENST00000543359 UBE2V1Q13404 147 aa6.74□□□□□ -1.33
TNFRSF1A-215ENST00000543359 M0R2T5 61 aa6.73□□□□□ -1.33
TNFRSF1A-215ENST00000543359 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
TNFRSF1A-215ENST00000543359 TRACP01848 142 aa6.72□□□□□ -1.33
TNFRSF1A-215ENST00000543359 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
TNFRSF1A-215ENST00000543359 M0R143 59 aa6.71□□□□□ -1.34
TNFRSF1A-215ENST00000543359 CCKP06307 115 aa6.71□□□□□ -1.34
TNFRSF1A-215ENST00000543359 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
TNFRSF1A-215ENST00000543359 IGKV4-1P06312 121 aa6.7□□□□□ -1.34
TNFRSF1A-215ENST00000543359 LINC00313P59037 77 aa6.7□□□□□ -1.34
TNFRSF1A-215ENST00000543359 DEFB116Q30KQ4 102 aa6.69□□□□□ -1.34
TNFRSF1A-215ENST00000543359 A0A1B0GV90 55 aa6.67□□□□□ -1.34
TNFRSF1A-215ENST00000543359 SCGB1C2P0DMR2 95 aa6.67□□□□□ -1.34
TNFRSF1A-215ENST00000543359 RBM3P98179 157 aaKnown RBP6.66□□□□□ -1.34
TNFRSF1A-215ENST00000543359 BAALC-AS2P0C853 105 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms