RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
YBX3-213ENST00000542641 CLEC2BQ92478 149 aa6.9□□□□□ -1.3
YBX3-213ENST00000542641 A0A087X002 238 aa6.89□□□□□ -1.31
YBX3-213ENST00000542641 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
YBX3-213ENST00000542641 LCE3BQ5TA77 95 aa6.89□□□□□ -1.31
YBX3-213ENST00000542641 Q6ZQY7 126 aa6.89□□□□□ -1.31
YBX3-213ENST00000542641 TEX49A0A1B0GTD5 131 aa6.88□□□□□ -1.31
YBX3-213ENST00000542641 A0A1B0GX51 115 aa6.88□□□□□ -1.31
YBX3-213ENST00000542641 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
YBX3-213ENST00000542641 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
YBX3-213ENST00000542641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
YBX3-213ENST00000542641 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
YBX3-213ENST00000542641 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
YBX3-213ENST00000542641 H3BUT2 72 aa6.87□□□□□ -1.31
YBX3-213ENST00000542641 SPRR1BP22528 89 aa6.87□□□□□ -1.31
YBX3-213ENST00000542641 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
YBX3-213ENST00000542641 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
YBX3-213ENST00000542641 DNAL4O96015 105 aa6.85□□□□□ -1.31
YBX3-213ENST00000542641 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
YBX3-213ENST00000542641 LYRM7Q5U5X0 104 aa6.85□□□□□ -1.31
YBX3-213ENST00000542641 Q8N377 158 aa6.85□□□□□ -1.31
YBX3-213ENST00000542641 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
YBX3-213ENST00000542641 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 LST1O00453 97 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 OCIAD2Q56VL3 154 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 C3orf22Q8N5N4 141 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 SVIPQ8NHG7 77 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
YBX3-213ENST00000542641 TNXBP22105 4242 aa6.83□□□□□ -1.32
YBX3-213ENST00000542641 TCL1BO95988 128 aa6.83□□□□□ -1.32
YBX3-213ENST00000542641 TRACP01848 142 aa6.83□□□□□ -1.32
YBX3-213ENST00000542641 A0A1W2PPM0 123 aa6.82□□□□□ -1.32
YBX3-213ENST00000542641 ATXN8Q156A1 80 aa6.82□□□□□ -1.32
YBX3-213ENST00000542641 PPDPFLQ8WWR9 84 aa6.82□□□□□ -1.32
YBX3-213ENST00000542641 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 FABP2P12104 132 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 MOBPQ13875 183 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 C9orf153Q5TBE3 101 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 ORMDL1Q9P0S3 153 aa6.81□□□□□ -1.32
YBX3-213ENST00000542641 H3BQ85 93 aa6.79□□□□□ -1.32
YBX3-213ENST00000542641 SSBP3-AS1Q7Z2R9 100 aa6.79□□□□□ -1.32
YBX3-213ENST00000542641 F8WEM9 126 aa6.78□□□□□ -1.32
YBX3-213ENST00000542641 TMEM256-PLSCR3K7ERE1 68 aa6.78□□□□□ -1.32
YBX3-213ENST00000542641 Q8NBF4 154 aa6.78□□□□□ -1.32
YBX3-213ENST00000542641 NDUFV3P56181 108 aaKnown RBP6.77□□□□□ -1.33
YBX3-213ENST00000542641 BAALC-AS2P0C853 105 aa6.76□□□□□ -1.33
YBX3-213ENST00000542641 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
YBX3-213ENST00000542641 SPCS1Q9Y6A9 102 aa6.76□□□□□ -1.33
YBX3-213ENST00000542641 H3BMG7 143 aa6.74□□□□□ -1.33
YBX3-213ENST00000542641 C9JAW5 83 aa6.73□□□□□ -1.33
YBX3-213ENST00000542641 UBE2V1Q13404 147 aa6.73□□□□□ -1.33
YBX3-213ENST00000542641 SPAG11AQ6PDA7 123 aa6.73□□□□□ -1.33
YBX3-213ENST00000542641 IGLV8-61A0A075B6I0 122 aa6.72□□□□□ -1.33
YBX3-213ENST00000542641 Q6JHZ5 121 aa6.72□□□□□ -1.33
YBX3-213ENST00000542641 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
YBX3-213ENST00000542641 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
YBX3-213ENST00000542641 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
YBX3-213ENST00000542641 K7EP34 96 aa6.71□□□□□ -1.34
YBX3-213ENST00000542641 A0A1B0GV72 72 aa6.7□□□□□ -1.34
YBX3-213ENST00000542641 SPINK1P00995 79 aa6.7□□□□□ -1.34
YBX3-213ENST00000542641 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
YBX3-213ENST00000542641 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
YBX3-213ENST00000542641 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
YBX3-213ENST00000542641 MTURNQ8N3F0 131 aa6.69□□□□□ -1.34
YBX3-213ENST00000542641 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
YBX3-213ENST00000542641 KRTAP9-4Q9BYQ2 154 aa6.69□□□□□ -1.34
YBX3-213ENST00000542641 CD164Q04900 197 aa6.68□□□□□ -1.34
YBX3-213ENST00000542641 H3BT86 120 aa6.67□□□□□ -1.34
YBX3-213ENST00000542641 RBM3P98179 157 aaKnown RBP6.67□□□□□ -1.34
YBX3-213ENST00000542641 HERC1Q15751 4861 aa6.66□□□□□ -1.34
YBX3-213ENST00000542641 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.34
YBX3-213ENST00000542641 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.34
YBX3-213ENST00000542641 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
YBX3-213ENST00000542641 TEN1Q86WV5 123 aa6.63□□□□□ -1.35
YBX3-213ENST00000542641 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
YBX3-213ENST00000542641 TRBV7-4A0A0J9YYF1 115 aa6.62□□□□□ -1.35
YBX3-213ENST00000542641 TRBV7-7A0A0K0K1E9 115 aa6.62□□□□□ -1.35
YBX3-213ENST00000542641 Q6Q795 121 aa6.62□□□□□ -1.35
YBX3-213ENST00000542641 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
YBX3-213ENST00000542641 A0A1W2PNM2 257 aa6.61□□□□□ -1.35
YBX3-213ENST00000542641 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
YBX3-213ENST00000542641 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
YBX3-213ENST00000542641 A0A1B0GV90 55 aa6.6□□□□□ -1.35
YBX3-213ENST00000542641 F8W1H4 67 aa6.6□□□□□ -1.35
YBX3-213ENST00000542641 CCKP06307 115 aa6.6□□□□□ -1.35
YBX3-213ENST00000542641 VPS25Q9BRG1 176 aa6.6□□□□□ -1.35
YBX3-213ENST00000542641 PDE6GP18545 87 aa6.59□□□□□ -1.35
YBX3-213ENST00000542641 Q5XG85 94 aa6.59□□□□□ -1.35
YBX3-213ENST00000542641 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
YBX3-213ENST00000542641 LOC110117498A0A087WWA1 95 aa6.58□□□□□ -1.36
YBX3-213ENST00000542641 PRR4Q16378 134 aa6.58□□□□□ -1.36
YBX3-213ENST00000542641 A0A087WSZ3 146 aa6.57□□□□□ -1.36
YBX3-213ENST00000542641 Q6ZQT0 140 aa6.57□□□□□ -1.36
YBX3-213ENST00000542641 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
YBX3-213ENST00000542641 SS18L2Q9UHA2 77 aa6.56□□□□□ -1.36
YBX3-213ENST00000542641 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
YBX3-213ENST00000542641 ASB16-AS1Q495Z4 193 aa6.54□□□□□ -1.36
YBX3-213ENST00000542641 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms