RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 DSCR10P59022 87 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 Q5XG85 94 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 Q8NDZ9 215 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 PLA2G2DQ9UNK4 145 aa7.74□□□□□ -1.17
EIF3A-203ENST00000541549 STAB2Q8WWQ8 2551 aa7.72□□□□□ -1.17
EIF3A-203ENST00000541549 COL6A3P12111 3177 aa7.72□□□□□ -1.17
EIF3A-203ENST00000541549 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.17
EIF3A-203ENST00000541549 FP248Q71RG6 208 aaPredicted RBP7.71□□□□□ -1.17
EIF3A-203ENST00000541549 COL12A1Q99715 3063 aa7.71□□□□□ -1.17
EIF3A-203ENST00000541549 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
EIF3A-203ENST00000541549 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
EIF3A-203ENST00000541549 FLNCQ14315 2725 aa7.71□□□□□ -1.18
EIF3A-203ENST00000541549 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
EIF3A-203ENST00000541549 FAM229BQ4G0N7 80 aa7.69□□□□□ -1.18
EIF3A-203ENST00000541549 ZNF861PO60384 105 aa7.68□□□□□ -1.18
EIF3A-203ENST00000541549 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
EIF3A-203ENST00000541549 K7EIL1 84 aa7.68□□□□□ -1.18
EIF3A-203ENST00000541549 Q1T7F1 81 aa7.67□□□□□ -1.18
EIF3A-203ENST00000541549 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
EIF3A-203ENST00000541549 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
EIF3A-203ENST00000541549 ZZEF1O43149 2961 aa7.66□□□□□ -1.18
EIF3A-203ENST00000541549 SPRR4Q96PI1 79 aa7.66□□□□□ -1.18
EIF3A-203ENST00000541549 KRTAP1-3Q8IUG1 177 aa7.66□□□□□ -1.18
EIF3A-203ENST00000541549 OXTP01178 125 aa7.66□□□□□ -1.18
EIF3A-203ENST00000541549 REV3LO60673 3130 aa7.65□□□□□ -1.18
EIF3A-203ENST00000541549 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.19
EIF3A-203ENST00000541549 LCA10Q71F78 164 aa7.64□□□□□ -1.19
EIF3A-203ENST00000541549 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
EIF3A-203ENST00000541549 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
EIF3A-203ENST00000541549 IGSF10Q6WRI0 2623 aa7.62□□□□□ -1.19
EIF3A-203ENST00000541549 LRBAP50851 2863 aa7.62□□□□□ -1.19
EIF3A-203ENST00000541549 EYSQ5T1H1 3165 aa7.62□□□□□ -1.19
EIF3A-203ENST00000541549 KRTAP1-1Q07627 177 aa7.61□□□□□ -1.19
EIF3A-203ENST00000541549 IGLV5-37A0A075B6J1 123 aa7.61□□□□□ -1.19
EIF3A-203ENST00000541549 A0A087WTM6 91 aa7.6□□□□□ -1.19
EIF3A-203ENST00000541549 CNBPP62633 177 aaKnown RBP7.6□□□□□ -1.19
EIF3A-203ENST00000541549 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
EIF3A-203ENST00000541549 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
EIF3A-203ENST00000541549 Q8N1X5 172 aa7.56□□□□□ -1.2
EIF3A-203ENST00000541549 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
EIF3A-203ENST00000541549 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
EIF3A-203ENST00000541549 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
EIF3A-203ENST00000541549 IGLV7-43P04211 117 aa7.54□□□□□ -1.2
EIF3A-203ENST00000541549 RBM12B-AS1Q9P1G2 102 aa7.53□□□□□ -1.2
EIF3A-203ENST00000541549 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
EIF3A-203ENST00000541549 SPRR1AP35321 89 aa7.5□□□□□ -1.21
EIF3A-203ENST00000541549 HIVEP1P15822 2718 aa7.5□□□□□ -1.21
EIF3A-203ENST00000541549 Q75L30 129 aa7.5□□□□□ -1.21
EIF3A-203ENST00000541549 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
EIF3A-203ENST00000541549 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
EIF3A-203ENST00000541549 Q5VV11 94 aa7.49□□□□□ -1.21
EIF3A-203ENST00000541549 ZANQ9Y493 2812 aa7.48□□□□□ -1.21
EIF3A-203ENST00000541549 APCP25054 2843 aa7.48□□□□□ -1.21
EIF3A-203ENST00000541549 HRES1P13985 223 aa7.48□□□□□ -1.21
EIF3A-203ENST00000541549 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
EIF3A-203ENST00000541549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
EIF3A-203ENST00000541549 WDFY3Q8IZQ1 3526 aa7.47□□□□□ -1.21
EIF3A-203ENST00000541549 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
EIF3A-203ENST00000541549 PRAC1Q96KF2 57 aa7.46□□□□□ -1.21
EIF3A-203ENST00000541549 A0A0D9SG42 100 aa7.45□□□□□ -1.22
EIF3A-203ENST00000541549 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
EIF3A-203ENST00000541549 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
EIF3A-203ENST00000541549 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
EIF3A-203ENST00000541549 ITPR2Q14571 2701 aa7.42□□□□□ -1.22
EIF3A-203ENST00000541549 DMXL1Q9Y485 3027 aa7.42□□□□□ -1.22
EIF3A-203ENST00000541549 SPINK7P58062 85 aa7.42□□□□□ -1.22
EIF3A-203ENST00000541549 NIPBLQ6KC79 2804 aaeCLIP7.41□□□□□ -1.22
EIF3A-203ENST00000541549 SPTBN5Q9NRC6 3674 aaKnown RBP7.41□□□□□ -1.22
EIF3A-203ENST00000541549 DCHS2Q6V1P9 2916 aa7.4□□□□□ -1.23
EIF3A-203ENST00000541549 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
EIF3A-203ENST00000541549 LOC400499M0QZD8 3231 aa7.38□□□□□ -1.23
EIF3A-203ENST00000541549 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
EIF3A-203ENST00000541549 DCHS1Q96JQ0 3298 aa7.37□□□□□ -1.23
EIF3A-203ENST00000541549 NF1P21359 2839 aa7.37□□□□□ -1.23
EIF3A-203ENST00000541549 TNP2Q05952 138 aa7.37□□□□□ -1.23
EIF3A-203ENST00000541549 SPRR1BP22528 89 aa7.35□□□□□ -1.23
EIF3A-203ENST00000541549 A0A1B0GU33 70 aa7.34□□□□□ -1.23
EIF3A-203ENST00000541549 KMT2BQ9UMN6 2715 aaPredicted RBP7.33□□□□□ -1.24
EIF3A-203ENST00000541549 KRTAP1-5Q9BYS1 174 aa7.33□□□□□ -1.24
EIF3A-203ENST00000541549 FBN2P35556 2912 aa7.32□□□□□ -1.24
EIF3A-203ENST00000541549 Q5W150 140 aa7.31□□□□□ -1.24
EIF3A-203ENST00000541549 KRTAP4-16G5E9R7 235 aaPredicted RBP7.29□□□□□ -1.24
EIF3A-203ENST00000541549 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
EIF3A-203ENST00000541549 ZCCHC13Q8WW36 166 aaKnown RBP7.27□□□□□ -1.25
EIF3A-203ENST00000541549 TNRC18O15417 2968 aaPredicted RBP7.26□□□□□ -1.25
EIF3A-203ENST00000541549 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
EIF3A-203ENST00000541549 H3BS24 57 aa7.25□□□□□ -1.25
EIF3A-203ENST00000541549 CRYBG3Q68DQ2 2970 aa7.25□□□□□ -1.25
EIF3A-203ENST00000541549 ASPMQ8IZT6 3477 aa7.24□□□□□ -1.25
EIF3A-203ENST00000541549 PLAC8Q9NZF1 115 aa7.24□□□□□ -1.25
EIF3A-203ENST00000541549 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
EIF3A-203ENST00000541549 PANO1I0J062 215 aa7.19□□□□□ -1.26
EIF3A-203ENST00000541549 TENM4Q6N022 2769 aa7.18□□□□□ -1.26
EIF3A-203ENST00000541549 Q6ZR54 194 aa7.17□□□□□ -1.26
EIF3A-203ENST00000541549 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
EIF3A-203ENST00000541549 A0A087X002 238 aa7.15□□□□□ -1.26
EIF3A-203ENST00000541549 A8MU10 97 aa7.15□□□□□ -1.26
EIF3A-203ENST00000541549 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms