RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SLC25A20O43772 301 aa5.6□□□□□ -1.51
DDX55-208ENST00000541259 ANAPC11Q9NYG5 84 aa5.6□□□□□ -1.51
DDX55-208ENST00000541259 LST1O00453 97 aa5.59□□□□□ -1.51
DDX55-208ENST00000541259 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
DDX55-208ENST00000541259 Q6ZQY7 126 aa5.59□□□□□ -1.51
DDX55-208ENST00000541259 DEFB105AQ8NG35 78 aa5.59□□□□□ -1.51
DDX55-208ENST00000541259 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
DDX55-208ENST00000541259 TNXBP22105 4242 aa5.58□□□□□ -1.52
DDX55-208ENST00000541259 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
DDX55-208ENST00000541259 FABP2P12104 132 aa5.58□□□□□ -1.52
DDX55-208ENST00000541259 GAGE2AQ6NT46 116 aa5.58□□□□□ -1.52
DDX55-208ENST00000541259 A0A1B0GX51 115 aa5.57□□□□□ -1.52
DDX55-208ENST00000541259 ATXN8Q156A1 80 aa5.57□□□□□ -1.52
DDX55-208ENST00000541259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.57□□□□□ -1.52
DDX55-208ENST00000541259 MYCBP2O75592 4640 aa5.56□□□□□ -1.52
DDX55-208ENST00000541259 SNCGO76070 127 aa5.56□□□□□ -1.52
DDX55-208ENST00000541259 TRACP01848 142 aa5.56□□□□□ -1.52
DDX55-208ENST00000541259 LYRM7Q5U5X0 104 aa5.56□□□□□ -1.52
DDX55-208ENST00000541259 Q8N377 158 aa5.56□□□□□ -1.52
DDX55-208ENST00000541259 IGLV5-48A0A075B6I7 105 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
DDX55-208ENST00000541259 SPCS1Q9Y6A9 102 aa5.55□□□□□ -1.52
DDX55-208ENST00000541259 A0A087X002 238 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 TEX49A0A1B0GTD5 131 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 H3BMG7 143 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 DNAL4O96015 105 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 SPRR1BP22528 89 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 SMIM29Q86T20 159 aa5.54□□□□□ -1.52
DDX55-208ENST00000541259 K7EP34 96 aa5.53□□□□□ -1.52
DDX55-208ENST00000541259 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
DDX55-208ENST00000541259 PRR26Q8N8Z3 221 aa5.53□□□□□ -1.52
DDX55-208ENST00000541259 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
DDX55-208ENST00000541259 A0A1B0GV90 55 aa5.52□□□□□ -1.53
DDX55-208ENST00000541259 BAALC-AS2P0C853 105 aa5.52□□□□□ -1.53
DDX55-208ENST00000541259 MTURNQ8N3F0 131 aa5.52□□□□□ -1.53
DDX55-208ENST00000541259 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
DDX55-208ENST00000541259 IGLV9-49A0A0B4J1Y8 123 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 C9JAW5 83 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 CRYGAP11844 174 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 OCIAD2Q56VL3 154 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 LINC01600Q96MT4 127 aa5.51□□□□□ -1.53
DDX55-208ENST00000541259 LAMTOR3Q9UHA4 124 aa5.5□□□□□ -1.53
DDX55-208ENST00000541259 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
DDX55-208ENST00000541259 NDUFV3P56181 108 aaKnown RBP5.49□□□□□ -1.53
DDX55-208ENST00000541259 PPDPFLQ8WWR9 84 aa5.49□□□□□ -1.53
DDX55-208ENST00000541259 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 A0A1B0GV72 72 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 MOBPQ13875 183 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 GTF2H5Q6ZYL4 71 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 PRO0461Q9UI25 63 aa5.48□□□□□ -1.53
DDX55-208ENST00000541259 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
DDX55-208ENST00000541259 UBE2V1Q13404 147 aa5.47□□□□□ -1.53
DDX55-208ENST00000541259 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
DDX55-208ENST00000541259 H3BQ85 93 aa5.46□□□□□ -1.54
DDX55-208ENST00000541259 OXTP01178 125 aa5.46□□□□□ -1.54
DDX55-208ENST00000541259 ANKRD29Q8N6D5 301 aa5.46□□□□□ -1.54
DDX55-208ENST00000541259 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
DDX55-208ENST00000541259 F8WEM9 126 aa5.45□□□□□ -1.54
DDX55-208ENST00000541259 H3BT86 120 aa5.45□□□□□ -1.54
DDX55-208ENST00000541259 Q8NBF4 154 aa5.45□□□□□ -1.54
DDX55-208ENST00000541259 DMBT1Q9UGM3 2413 aaPredicted RBP5.44□□□□□ -1.54
DDX55-208ENST00000541259 IGLV8-61A0A075B6I0 122 aa5.44□□□□□ -1.54
DDX55-208ENST00000541259 SSBP3-AS1Q7Z2R9 100 aa5.44□□□□□ -1.54
DDX55-208ENST00000541259 IGFL1Q6UW32 110 aa5.43□□□□□ -1.54
DDX55-208ENST00000541259 F8W1H4 67 aa5.42□□□□□ -1.54
DDX55-208ENST00000541259 HRCT1Q6UXD1 115 aa5.42□□□□□ -1.54
DDX55-208ENST00000541259 RBM3P98179 157 aaKnown RBP5.41□□□□□ -1.54
DDX55-208ENST00000541259 OBSCN-AS1Q96MR7 158 aa5.41□□□□□ -1.54
DDX55-208ENST00000541259 Q6JHZ5 121 aa5.4□□□□□ -1.54
DDX55-208ENST00000541259 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
DDX55-208ENST00000541259 TRBV7-4A0A0J9YYF1 115 aa5.39□□□□□ -1.55
DDX55-208ENST00000541259 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
DDX55-208ENST00000541259 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
DDX55-208ENST00000541259 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
DDX55-208ENST00000541259 ETDBQ3ZM63 59 aa5.38□□□□□ -1.55
DDX55-208ENST00000541259 LCE5AQ5TCM9 118 aa5.38□□□□□ -1.55
DDX55-208ENST00000541259 DSCR8Q96T75 97 aa5.38□□□□□ -1.55
DDX55-208ENST00000541259 Q6ZQT0 140 aa5.37□□□□□ -1.55
DDX55-208ENST00000541259 LOC110117498A0A087WWA1 95 aa5.36□□□□□ -1.55
DDX55-208ENST00000541259 TEN1Q86WV5 123 aa5.36□□□□□ -1.55
DDX55-208ENST00000541259 VPS25Q9BRG1 176 aa5.36□□□□□ -1.55
DDX55-208ENST00000541259 CCKP06307 115 aa5.35□□□□□ -1.55
DDX55-208ENST00000541259 CD164Q04900 197 aa5.35□□□□□ -1.55
DDX55-208ENST00000541259 SPAG11AQ6PDA7 123 aa5.35□□□□□ -1.55
DDX55-208ENST00000541259 TRBV7-7A0A0K0K1E9 115 aa5.34□□□□□ -1.55
DDX55-208ENST00000541259 SPINK1P00995 79 aa5.34□□□□□ -1.55
DDX55-208ENST00000541259 Q6Q795 121 aa5.34□□□□□ -1.55
DDX55-208ENST00000541259 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
DDX55-208ENST00000541259 HERC1Q15751 4861 aa5.33□□□□□ -1.56
DDX55-208ENST00000541259 A0A087WSZ3 146 aa5.32□□□□□ -1.56
DDX55-208ENST00000541259 PDE6GP18545 87 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms