RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TCL1BO95988 128 aa14.02□□□□□ -0.17
CHFR-218ENST00000540963 SNRPEP62304 92 aaKnown RBP14.01□□□□□ -0.17
CHFR-218ENST00000540963 TRAV13-2A0A0B4J235 113 aa14□□□□□ -0.17
CHFR-218ENST00000540963 CFC1P0CG37 223 aa13.99□□□□□ -0.17
CHFR-218ENST00000540963 A4D1N5 150 aa13.97□□□□□ -0.17
CHFR-218ENST00000540963 Q6Q795 121 aa13.92□□□□□ -0.18
CHFR-218ENST00000540963 LINC00575Q6W349 94 aa13.91□□□□□ -0.18
CHFR-218ENST00000540963 ATP11AUNQ6ZP68 121 aa13.91□□□□□ -0.18
CHFR-218ENST00000540963 S100A2P29034 98 aa13.89□□□□□ -0.19
CHFR-218ENST00000540963 Q75L30 129 aa13.89□□□□□ -0.19
CHFR-218ENST00000540963 SSPOA2VEC9 5147 aa13.89□□□□□ -0.19
CHFR-218ENST00000540963 USH2AO75445 5202 aa13.88□□□□□ -0.19
CHFR-218ENST00000540963 NHP2Q9NX24 153 aaKnown RBP13.88□□□□□ -0.19
CHFR-218ENST00000540963 KRTAP9-8Q9BYQ0 159 aa13.87□□□□□ -0.19
CHFR-218ENST00000540963 Q6ZQY7 126 aa13.83□□□□□ -0.2
CHFR-218ENST00000540963 HSBP1L1C9JCN9 74 aa13.82□□□□□ -0.2
CHFR-218ENST00000540963 hADV29S1A0JD25 119 aa13.81□□□□□ -0.2
CHFR-218ENST00000540963 VAMP3Q15836 100 aa13.81□□□□□ -0.2
CHFR-218ENST00000540963 F8WEM9 126 aa13.8□□□□□ -0.2
CHFR-218ENST00000540963 S100A1P23297 94 aa13.8□□□□□ -0.2
CHFR-218ENST00000540963 C12orf57Q99622 126 aa13.8□□□□□ -0.2
CHFR-218ENST00000540963 OBSCN-AS1Q96MR7 158 aa13.78□□□□□ -0.2
CHFR-218ENST00000540963 S100A6P06703 90 aa13.77□□□□□ -0.21
CHFR-218ENST00000540963 COX8AP10176 69 aa13.76□□□□□ -0.21
CHFR-218ENST00000540963 Q6JHZ5 121 aa13.76□□□□□ -0.21
CHFR-218ENST00000540963 IGFL1Q6UW32 110 aa13.76□□□□□ -0.21
CHFR-218ENST00000540963 TRBV7-7A0A0K0K1E9 115 aa13.75□□□□□ -0.21
CHFR-218ENST00000540963 SCGB1D1O95968 90 aa13.75□□□□□ -0.21
CHFR-218ENST00000540963 HIST1H4GQ99525 98 aa13.73□□□□□ -0.21
CHFR-218ENST00000540963 OCIAD2Q56VL3 154 aa13.72□□□□□ -0.21
CHFR-218ENST00000540963 CLEC2BQ92478 149 aa13.72□□□□□ -0.21
CHFR-218ENST00000540963 FCGBPQ9Y6R7 5405 aaPredicted RBP13.72□□□□□ -0.21
CHFR-218ENST00000540963 DLEU1O43261 78 aa13.7□□□□□ -0.22
CHFR-218ENST00000540963 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.7□□□□□ -0.22
CHFR-218ENST00000540963 C14orf144Q96I85 54 aa13.67□□□□□ -0.22
CHFR-218ENST00000540963 TRBV20-1A0A075B6N2 111 aa13.65□□□□□ -0.22
CHFR-218ENST00000540963 BVES-AS1Q5T3Y7 98 aa13.64□□□□□ -0.23
CHFR-218ENST00000540963 H3BUT2 72 aa13.63□□□□□ -0.23
CHFR-218ENST00000540963 Q96NJ1 140 aa13.63□□□□□ -0.23
CHFR-218ENST00000540963 C2orf91Q6ZV80 131 aa13.62□□□□□ -0.23
CHFR-218ENST00000540963 FAM218AQ96MZ4 157 aa13.62□□□□□ -0.23
CHFR-218ENST00000540963 C20orf166-AS1Q96NR2 134 aa13.62□□□□□ -0.23
CHFR-218ENST00000540963 PPDPFLQ8WWR9 84 aa13.61□□□□□ -0.23
CHFR-218ENST00000540963 LST1O00453 97 aa13.59□□□□□ -0.23
CHFR-218ENST00000540963 HIGD1BQ9P298 99 aa13.59□□□□□ -0.23
CHFR-218ENST00000540963 SNHG12Q9BXW3 62 aa13.58□□□□□ -0.24
CHFR-218ENST00000540963 PAM16Q9Y3D7 125 aa13.58□□□□□ -0.24
CHFR-218ENST00000540963 A8MUU9 505 aa13.57□□□□□ -0.24
CHFR-218ENST00000540963 MT2AP02795 61 aa13.57□□□□□ -0.24
CHFR-218ENST00000540963 KRTAP19-1Q8IUB9 90 aa13.57□□□□□ -0.24
CHFR-218ENST00000540963 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
CHFR-218ENST00000540963 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
CHFR-218ENST00000540963 RAB37Q96AX2 223 aa13.52□□□□□ -0.25
CHFR-218ENST00000540963 LCE2BO14633 110 aa13.51□□□□□ -0.25
CHFR-218ENST00000540963 SS18L2Q9UHA2 77 aa13.5□□□□□ -0.25
CHFR-218ENST00000540963 H0YGX0 51 aa13.49□□□□□ -0.25
CHFR-218ENST00000540963 NDUFV3P56181 108 aaKnown RBP13.47□□□□□ -0.25
CHFR-218ENST00000540963 CEND1Q8N111 149 aa13.46□□□□□ -0.25
CHFR-218ENST00000540963 MT1FP04733 61 aa13.45□□□□□ -0.26
CHFR-218ENST00000540963 VAMP8Q9BV40 100 aa13.45□□□□□ -0.26
CHFR-218ENST00000540963 KRTAP9-3Q9BYQ3 159 aa13.45□□□□□ -0.26
CHFR-218ENST00000540963 FXYD2P54710 66 aa13.44□□□□□ -0.26
CHFR-218ENST00000540963 MACF1Q9UPN3 7388 aaKnown RBP13.42□□□□□ -0.26
CHFR-218ENST00000540963 TEN1Q86WV5 123 aa13.41□□□□□ -0.26
CHFR-218ENST00000540963 PRO1854Q9UHT4 67 aa13.41□□□□□ -0.26
CHFR-218ENST00000540963 FAM236DA0A1B0GTK5 79 aa13.39□□□□□ -0.27
CHFR-218ENST00000540963 FAM236CP0DP71 79 aa13.39□□□□□ -0.27
CHFR-218ENST00000540963 KRTAP10-10P60014 251 aa13.38□□□□□ -0.27
CHFR-218ENST00000540963 A0A087WSZ3 146 aa13.37□□□□□ -0.27
CHFR-218ENST00000540963 TRIAP1O43715 76 aa13.37□□□□□ -0.27
CHFR-218ENST00000540963 A0A1B0GX51 115 aa13.36□□□□□ -0.27
CHFR-218ENST00000540963 H3BMG7 143 aa13.36□□□□□ -0.27
CHFR-218ENST00000540963 SYNE2Q8WXH0 6885 aaKnown RBP13.35□□□□□ -0.27
CHFR-218ENST00000540963 A0A1W2PNM2 257 aa13.35□□□□□ -0.27
CHFR-218ENST00000540963 LINC00846Q9NV44 126 aa13.35□□□□□ -0.27
CHFR-218ENST00000540963 PYY3Q5JQD4 70 aa13.33□□□□□ -0.28
CHFR-218ENST00000540963 MPLKIPQ8TAP9 179 aa13.33□□□□□ -0.28
CHFR-218ENST00000540963 RBM12B-AS1Q9P1G2 102 aa13.33□□□□□ -0.28
CHFR-218ENST00000540963 SNCGO76070 127 aa13.32□□□□□ -0.28
CHFR-218ENST00000540963 FABP2P12104 132 aa13.32□□□□□ -0.28
CHFR-218ENST00000540963 KRTAP16-1A8MUX0 517 aa13.29□□□□□ -0.28
CHFR-218ENST00000540963 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
CHFR-218ENST00000540963 A6NJY4 79 aa13.28□□□□□ -0.28
CHFR-218ENST00000540963 K7ERJ3 54 aa13.27□□□□□ -0.29
CHFR-218ENST00000540963 DSCR10P59022 87 aa13.27□□□□□ -0.29
CHFR-218ENST00000540963 HRES1P13985 223 aa13.25□□□□□ -0.29
CHFR-218ENST00000540963 HSD52Q0P140 79 aa13.22□□□□□ -0.29
CHFR-218ENST00000540963 KRTAP19-6Q3LI70 58 aa13.22□□□□□ -0.29
CHFR-218ENST00000540963 LINC00313P59037 77 aa13.21□□□□□ -0.29
CHFR-218ENST00000540963 GHRHP01286 108 aa13.19□□□□□ -0.3
CHFR-218ENST00000540963 A0A1B0GV72 72 aa13.18□□□□□ -0.3
CHFR-218ENST00000540963 NOTCH2NLQ7Z3S9 236 aa13.17□□□□□ -0.3
CHFR-218ENST00000540963 SIGMAR1Q99720 223 aa13.17□□□□□ -0.3
CHFR-218ENST00000540963 TRBV7-4A0A0J9YYF1 115 aa13.16□□□□□ -0.3
CHFR-218ENST00000540963 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
CHFR-218ENST00000540963 ORMDL1Q9P0S3 153 aa13.16□□□□□ -0.3
CHFR-218ENST00000540963 PSMB2P49721 201 aa13.13□□□□□ -0.31
CHFR-218ENST00000540963 LINC00472Q9H8W2 130 aa13.13□□□□□ -0.31
CHFR-218ENST00000540963 MTURNQ8N3F0 131 aa13.11□□□□□ -0.31
CHFR-218ENST00000540963 DNAL4O96015 105 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms