RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 FAM236DA0A1B0GTK5 79 aa10.66□□□□□ -0.7
EPB41L3-204ENST00000540638 FAM236CP0DP71 79 aa10.66□□□□□ -0.7
EPB41L3-204ENST00000540638 RTL8CO15255 209 aa10.65□□□□□ -0.7
EPB41L3-204ENST00000540638 A0A087WTM6 91 aa10.65□□□□□ -0.7
EPB41L3-204ENST00000540638 PRR4Q16378 134 aa10.65□□□□□ -0.71
EPB41L3-204ENST00000540638 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.71
EPB41L3-204ENST00000540638 TMEM254Q8TBM7 123 aa10.64□□□□□ -0.71
EPB41L3-204ENST00000540638 IGLV5-52A0A0A0MRZ9 124 aa10.64□□□□□ -0.71
EPB41L3-204ENST00000540638 TNP2Q05952 138 aa10.62□□□□□ -0.71
EPB41L3-204ENST00000540638 C1orf134Q5TEV5 83 aa10.61□□□□□ -0.71
EPB41L3-204ENST00000540638 MEGF8Q7Z7M0 2845 aa10.61□□□□□ -0.71
EPB41L3-204ENST00000540638 DSCR10P59022 87 aa10.59□□□□□ -0.71
EPB41L3-204ENST00000540638 BCE1O60756 84 aa10.58□□□□□ -0.72
EPB41L3-204ENST00000540638 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
EPB41L3-204ENST00000540638 H7BZZ5 65 aa10.57□□□□□ -0.72
EPB41L3-204ENST00000540638 SPINK6Q6UWN8 80 aa10.56□□□□□ -0.72
EPB41L3-204ENST00000540638 Q6ZRN7 208 aaPredicted RBP10.56□□□□□ -0.72
EPB41L3-204ENST00000540638 PKIGQ9Y2B9 76 aa10.56□□□□□ -0.72
EPB41L3-204ENST00000540638 DNAH3Q8TD57 4116 aa10.55□□□□□ -0.72
EPB41L3-204ENST00000540638 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
EPB41L3-204ENST00000540638 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
EPB41L3-204ENST00000540638 MOBPQ13875 183 aa10.54□□□□□ -0.72
EPB41L3-204ENST00000540638 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
EPB41L3-204ENST00000540638 NDUFS5O43920 106 aa10.52□□□□□ -0.72
EPB41L3-204ENST00000540638 PLECQ15149 4684 aaKnown RBP10.52□□□□□ -0.73
EPB41L3-204ENST00000540638 FBN3Q75N90 2809 aa10.5□□□□□ -0.73
EPB41L3-204ENST00000540638 SPACA4Q8TDM5 124 aa10.5□□□□□ -0.73
EPB41L3-204ENST00000540638 OCR1Q9BZK8 76 aa10.5□□□□□ -0.73
EPB41L3-204ENST00000540638 DNAH7Q8WXX0 4024 aa10.5□□□□□ -0.73
EPB41L3-204ENST00000540638 KLKP1Q107X0 134 aa10.49□□□□□ -0.73
EPB41L3-204ENST00000540638 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
EPB41L3-204ENST00000540638 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
EPB41L3-204ENST00000540638 OXTP01178 125 aa10.48□□□□□ -0.73
EPB41L3-204ENST00000540638 NDUFB1O75438 58 aa10.47□□□□□ -0.73
EPB41L3-204ENST00000540638 CASC2Q6XLA1 102 aa10.47□□□□□ -0.73
EPB41L3-204ENST00000540638 SVIPQ8NHG7 77 aa10.47□□□□□ -0.73
EPB41L3-204ENST00000540638 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
EPB41L3-204ENST00000540638 MPLKIPQ8TAP9 179 aa10.46□□□□□ -0.73
EPB41L3-204ENST00000540638 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
EPB41L3-204ENST00000540638 A0A1B0GW54 56 aa10.45□□□□□ -0.74
EPB41L3-204ENST00000540638 IGHV6-1A0A0B4J1U7 121 aa10.44□□□□□ -0.74
EPB41L3-204ENST00000540638 MP68P56378 58 aa10.44□□□□□ -0.74
EPB41L3-204ENST00000540638 C4orf26Q17RF5 130 aa10.43□□□□□ -0.74
EPB41L3-204ENST00000540638 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
EPB41L3-204ENST00000540638 NDUFC1O43677 76 aa10.41□□□□□ -0.74
EPB41L3-204ENST00000540638 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
EPB41L3-204ENST00000540638 KRTAP10-2P60368 255 aa10.38□□□□□ -0.75
EPB41L3-204ENST00000540638 SERP1Q9Y6X1 66 aa10.38□□□□□ -0.75
EPB41L3-204ENST00000540638 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
EPB41L3-204ENST00000540638 A0A0U1RQV1 116 aa10.37□□□□□ -0.75
EPB41L3-204ENST00000540638 ZNF861PO60384 105 aa10.37□□□□□ -0.75
EPB41L3-204ENST00000540638 Q6ZR54 194 aa10.37□□□□□ -0.75
EPB41L3-204ENST00000540638 RPS28P62857 69 aaKnown RBP10.36□□□□□ -0.75
EPB41L3-204ENST00000540638 PRR15Q8IV56 129 aa10.36□□□□□ -0.75
EPB41L3-204ENST00000540638 A8MWP4 228 aa10.35□□□□□ -0.75
EPB41L3-204ENST00000540638 H0Y9P7 68 aa10.35□□□□□ -0.75
EPB41L3-204ENST00000540638 IGLV8-61A0A075B6I0 122 aa10.34□□□□□ -0.75
EPB41L3-204ENST00000540638 SPRR1BP22528 89 aa10.32□□□□□ -0.76
EPB41L3-204ENST00000540638 PCOTHQ58A44 107 aa10.32□□□□□ -0.76
EPB41L3-204ENST00000540638 C5orf47Q569G3 176 aa10.31□□□□□ -0.76
EPB41L3-204ENST00000540638 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
EPB41L3-204ENST00000540638 KMT2AQ03164 3969 aa10.31□□□□□ -0.76
EPB41L3-204ENST00000540638 DNAH1Q9P2D7 4330 aa10.31□□□□□ -0.76
EPB41L3-204ENST00000540638 WWC2-AS2Q96NR7 200 aa10.31□□□□□ -0.76
EPB41L3-204ENST00000540638 LINC00472Q9H8W2 130 aa10.3□□□□□ -0.76
EPB41L3-204ENST00000540638 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
EPB41L3-204ENST00000540638 PLAC8Q9NZF1 115 aa10.29□□□□□ -0.76
EPB41L3-204ENST00000540638 IGLV7-43P04211 117 aa10.28□□□□□ -0.76
EPB41L3-204ENST00000540638 RETNLBQ9BQ08 111 aa10.28□□□□□ -0.76
EPB41L3-204ENST00000540638 C1orf64Q8NEQ6 169 aa10.26□□□□□ -0.77
EPB41L3-204ENST00000540638 FAM229BQ4G0N7 80 aa10.25□□□□□ -0.77
EPB41L3-204ENST00000540638 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
EPB41L3-204ENST00000540638 ATP5EP56381 51 aaPredicted RBP10.21□□□□□ -0.77
EPB41L3-204ENST00000540638 KRTAP10-1P60331 282 aa10.21□□□□□ -0.78
EPB41L3-204ENST00000540638 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
EPB41L3-204ENST00000540638 C8orf17Q9NRJ1 99 aa10.19□□□□□ -0.78
EPB41L3-204ENST00000540638 Q5XG85 94 aa10.18□□□□□ -0.78
EPB41L3-204ENST00000540638 A0A087X002 238 aa10.18□□□□□ -0.78
EPB41L3-204ENST00000540638 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
EPB41L3-204ENST00000540638 SMR3BP02814 79 aaPredicted RBP10.18□□□□□ -0.78
EPB41L3-204ENST00000540638 NOTCH2NLQ7Z3S9 236 aa10.18□□□□□ -0.78
EPB41L3-204ENST00000540638 KRTAP29-1A8MX34 341 aaPredicted RBP10.16□□□□□ -0.78
EPB41L3-204ENST00000540638 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
EPB41L3-204ENST00000540638 A0A1B0GVX0 72 aa10.15□□□□□ -0.79
EPB41L3-204ENST00000540638 BRK1Q8WUW1 75 aa10.15□□□□□ -0.79
EPB41L3-204ENST00000540638 PSPHP1O15172 72 aa10.14□□□□□ -0.79
EPB41L3-204ENST00000540638 LINC00483Q53H64 154 aa10.13□□□□□ -0.79
EPB41L3-204ENST00000540638 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
EPB41L3-204ENST00000540638 Q96NJ1 140 aa10.11□□□□□ -0.79
EPB41L3-204ENST00000540638 VPS13DQ5THJ4 4388 aa10.1□□□□□ -0.79
EPB41L3-204ENST00000540638 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
EPB41L3-204ENST00000540638 MRPL34Q9BQ48 92 aaKnown RBP10.09□□□□□ -0.79
EPB41L3-204ENST00000540638 PLA2G1BP04054 148 aaKnown RBP10.08□□□□□ -0.8
EPB41L3-204ENST00000540638 ZCCHC13Q8WW36 166 aaKnown RBP10.07□□□□□ -0.8
EPB41L3-204ENST00000540638 LINC00336Q6ZUF6 198 aa10.05□□□□□ -0.8
EPB41L3-204ENST00000540638 DNAH2Q9P225 4427 aa10.05□□□□□ -0.8
EPB41L3-204ENST00000540638 DNAH11Q96DT5 4516 aa10.03□□□□□ -0.8
EPB41L3-204ENST00000540638 LCE6AA0A183 80 aa10.02□□□□□ -0.81
EPB41L3-204ENST00000540638 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
EPB41L3-204ENST00000540638 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms