RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
SNRPA1-203ENST00000540017 A6NJY4 79 aa10.23□□□□□ -0.77
SNRPA1-203ENST00000540017 CD164Q04900 197 aa10.23□□□□□ -0.77
SNRPA1-203ENST00000540017 HSD52Q0P140 79 aa10.22□□□□□ -0.77
SNRPA1-203ENST00000540017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-203ENST00000540017 FAM218AQ96MZ4 157 aa10.22□□□□□ -0.77
SNRPA1-203ENST00000540017 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.77
SNRPA1-203ENST00000540017 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
SNRPA1-203ENST00000540017 H0YGX0 51 aa10.18□□□□□ -0.78
SNRPA1-203ENST00000540017 MUC2Q02817 5179 aa10.17□□□□□ -0.78
SNRPA1-203ENST00000540017 MUC17Q685J3 4493 aa10.17□□□□□ -0.78
SNRPA1-203ENST00000540017 F8WEM9 126 aa10.17□□□□□ -0.78
SNRPA1-203ENST00000540017 K7ERJ3 54 aa10.17□□□□□ -0.78
SNRPA1-203ENST00000540017 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
SNRPA1-203ENST00000540017 TRIAP1O43715 76 aa10.16□□□□□ -0.78
SNRPA1-203ENST00000540017 OCIAD2Q56VL3 154 aa10.14□□□□□ -0.79
SNRPA1-203ENST00000540017 Q5XG85 94 aa10.14□□□□□ -0.79
SNRPA1-203ENST00000540017 PPDPFLQ8WWR9 84 aa10.14□□□□□ -0.79
SNRPA1-203ENST00000540017 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
SNRPA1-203ENST00000540017 SNHG12Q9BXW3 62 aa10.12□□□□□ -0.79
SNRPA1-203ENST00000540017 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
SNRPA1-203ENST00000540017 H3BUT2 72 aa10.1□□□□□ -0.79
SNRPA1-203ENST00000540017 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
SNRPA1-203ENST00000540017 Q6JHZ5 121 aa10.1□□□□□ -0.79
SNRPA1-203ENST00000540017 SNCGO76070 127 aa10.09□□□□□ -0.79
SNRPA1-203ENST00000540017 A0A1B0GX51 115 aa10.08□□□□□ -0.8
SNRPA1-203ENST00000540017 PSMB2P49721 201 aa10.07□□□□□ -0.8
SNRPA1-203ENST00000540017 XP32Q5T750 250 aa10.06□□□□□ -0.8
SNRPA1-203ENST00000540017 SMIM6P0DI80 62 aa10.05□□□□□ -0.8
SNRPA1-203ENST00000540017 NDUFV3P56181 108 aaKnown RBP10.05□□□□□ -0.8
SNRPA1-203ENST00000540017 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
SNRPA1-203ENST00000540017 C9orf92A6NGG3 77 aa10.03□□□□□ -0.8
SNRPA1-203ENST00000540017 TCL1BO95988 128 aa10.03□□□□□ -0.8
SNRPA1-203ENST00000540017 ASB16-AS1Q495Z4 193 aa10.03□□□□□ -0.8
SNRPA1-203ENST00000540017 FABP2P12104 132 aa10.01□□□□□ -0.81
SNRPA1-203ENST00000540017 COX6CP09669 75 aa10□□□□□ -0.81
SNRPA1-203ENST00000540017 LOC105371267A0A1B0GV96 52 aa9.99□□□□□ -0.81
SNRPA1-203ENST00000540017 H3BMG7 143 aa9.98□□□□□ -0.81
SNRPA1-203ENST00000540017 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
SNRPA1-203ENST00000540017 DNAL4O96015 105 aa9.97□□□□□ -0.81
SNRPA1-203ENST00000540017 GHRHP01286 108 aa9.96□□□□□ -0.82
SNRPA1-203ENST00000540017 SEC61BP60468 96 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-203ENST00000540017 ORMDL1Q9P0S3 153 aa9.96□□□□□ -0.82
SNRPA1-203ENST00000540017 Q6Q795 121 aa9.95□□□□□ -0.82
SNRPA1-203ENST00000540017 FAT4Q6V0I7 4981 aa9.95□□□□□ -0.82
SNRPA1-203ENST00000540017 M0R143 59 aa9.93□□□□□ -0.82
SNRPA1-203ENST00000540017 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
SNRPA1-203ENST00000540017 TEN1Q86WV5 123 aa9.93□□□□□ -0.82
SNRPA1-203ENST00000540017 A0A1B0GV72 72 aa9.92□□□□□ -0.82
SNRPA1-203ENST00000540017 LST1O00453 97 aa9.92□□□□□ -0.82
SNRPA1-203ENST00000540017 TRACP01848 142 aa9.91□□□□□ -0.82
SNRPA1-203ENST00000540017 A0A1W2PNM2 257 aa9.9□□□□□ -0.82
SNRPA1-203ENST00000540017 TMEM256-PLSCR3K7ERE1 68 aa9.9□□□□□ -0.82
SNRPA1-203ENST00000540017 NAA38Q9BRA0 125 aaKnown RBP9.9□□□□□ -0.82
SNRPA1-203ENST00000540017 A0A0U1RQV1 116 aa9.89□□□□□ -0.83
SNRPA1-203ENST00000540017 H3BQ85 93 aa9.89□□□□□ -0.83
SNRPA1-203ENST00000540017 A0A087WSZ3 146 aa9.88□□□□□ -0.83
SNRPA1-203ENST00000540017 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
SNRPA1-203ENST00000540017 PCOTHQ58A44 107 aa9.87□□□□□ -0.83
SNRPA1-203ENST00000540017 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
SNRPA1-203ENST00000540017 UBE2V1Q13404 147 aa9.85□□□□□ -0.83
SNRPA1-203ENST00000540017 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
SNRPA1-203ENST00000540017 Q96NJ1 140 aa9.84□□□□□ -0.83
SNRPA1-203ENST00000540017 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
SNRPA1-203ENST00000540017 BATFQ16520 125 aa9.81□□□□□ -0.84
SNRPA1-203ENST00000540017 LCE2AQ5TA79 106 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-203ENST00000540017 TRBV7-4A0A0J9YYF1 115 aa9.8□□□□□ -0.84
SNRPA1-203ENST00000540017 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-203ENST00000540017 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
SNRPA1-203ENST00000540017 CCKP06307 115 aa9.78□□□□□ -0.84
SNRPA1-203ENST00000540017 ATXN8Q156A1 80 aa9.78□□□□□ -0.84
SNRPA1-203ENST00000540017 RBM3P98179 157 aaKnown RBP9.75□□□□□ -0.85
SNRPA1-203ENST00000540017 DSCR8Q96T75 97 aa9.71□□□□□ -0.86
SNRPA1-203ENST00000540017 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
SNRPA1-203ENST00000540017 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
SNRPA1-203ENST00000540017 LINC00472Q9H8W2 130 aa9.7□□□□□ -0.86
SNRPA1-203ENST00000540017 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
SNRPA1-203ENST00000540017 KRTAP19-2Q3LHN2 52 aa9.69□□□□□ -0.86
SNRPA1-203ENST00000540017 SIGMAR1Q99720 223 aa9.69□□□□□ -0.86
SNRPA1-203ENST00000540017 C9orf118A6NHY6 69 aa9.68□□□□□ -0.86
SNRPA1-203ENST00000540017 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
SNRPA1-203ENST00000540017 LYRM7Q5U5X0 104 aa9.68□□□□□ -0.86
SNRPA1-203ENST00000540017 Q75L30 129 aa9.68□□□□□ -0.86
SNRPA1-203ENST00000540017 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
SNRPA1-203ENST00000540017 C9JAW5 83 aa9.67□□□□□ -0.86
SNRPA1-203ENST00000540017 DSCR10P59022 87 aa9.67□□□□□ -0.86
SNRPA1-203ENST00000540017 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
SNRPA1-203ENST00000540017 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
SNRPA1-203ENST00000540017 A0A1W2PPM0 123 aa9.63□□□□□ -0.87
SNRPA1-203ENST00000540017 JMJD7-PLA2G4BH0Y9G9 81 aa9.63□□□□□ -0.87
SNRPA1-203ENST00000540017 Q6ZQT0 140 aa9.63□□□□□ -0.87
SNRPA1-203ENST00000540017 A8MUU9 505 aa9.62□□□□□ -0.87
SNRPA1-203ENST00000540017 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
SNRPA1-203ENST00000540017 LOC110117498A0A087WWA1 95 aa9.61□□□□□ -0.87
SNRPA1-203ENST00000540017 ATP11AUNQ6ZP68 121 aa9.61□□□□□ -0.87
SNRPA1-203ENST00000540017 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
SNRPA1-203ENST00000540017 KRTAP16-1A8MUX0 517 aa9.59□□□□□ -0.87
SNRPA1-203ENST00000540017 LINC00313P59037 77 aa9.59□□□□□ -0.87
SNRPA1-203ENST00000540017 MTURNQ8N3F0 131 aa9.58□□□□□ -0.88
SNRPA1-203ENST00000540017 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms