RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 IGLV8-61A0A075B6I0 122 aa9.48□□□□□ -0.89
SFSWAP-205ENST00000537164 A0A0B4J2C4 111 aa9.48□□□□□ -0.89
SFSWAP-205ENST00000537164 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.48□□□□□ -0.89
SFSWAP-205ENST00000537164 SEC61BP60468 96 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-205ENST00000537164 PPDPFLQ8WWR9 84 aa9.47□□□□□ -0.89
SFSWAP-205ENST00000537164 FAT4Q6V0I7 4981 aa9.46□□□□□ -0.89
SFSWAP-205ENST00000537164 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
SFSWAP-205ENST00000537164 F8WEM9 126 aa9.45□□□□□ -0.9
SFSWAP-205ENST00000537164 CEND1Q8N111 149 aa9.45□□□□□ -0.9
SFSWAP-205ENST00000537164 RAB37Q96AX2 223 aa9.45□□□□□ -0.9
SFSWAP-205ENST00000537164 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
SFSWAP-205ENST00000537164 C1orf195Q5TG92 126 aa9.44□□□□□ -0.9
SFSWAP-205ENST00000537164 Q6JHZ5 121 aa9.44□□□□□ -0.9
SFSWAP-205ENST00000537164 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
SFSWAP-205ENST00000537164 H0YGX0 51 aa9.42□□□□□ -0.9
SFSWAP-205ENST00000537164 OCIAD2Q56VL3 154 aa9.41□□□□□ -0.9
SFSWAP-205ENST00000537164 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
SFSWAP-205ENST00000537164 A6NJY4 79 aa9.4□□□□□ -0.9
SFSWAP-205ENST00000537164 CLEC2BQ92478 149 aa9.4□□□□□ -0.9
SFSWAP-205ENST00000537164 TCL1BO95988 128 aa9.39□□□□□ -0.91
SFSWAP-205ENST00000537164 IGFL1Q6UW32 110 aa9.39□□□□□ -0.91
SFSWAP-205ENST00000537164 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
SFSWAP-205ENST00000537164 PRO1854Q9UHT4 67 aa9.39□□□□□ -0.91
SFSWAP-205ENST00000537164 FXYD2P54710 66 aa9.38□□□□□ -0.91
SFSWAP-205ENST00000537164 SNCGO76070 127 aa9.37□□□□□ -0.91
SFSWAP-205ENST00000537164 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
SFSWAP-205ENST00000537164 A0A1B0GX51 115 aa9.36□□□□□ -0.91
SFSWAP-205ENST00000537164 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
SFSWAP-205ENST00000537164 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
SFSWAP-205ENST00000537164 C9orf92A6NGG3 77 aa9.35□□□□□ -0.91
SFSWAP-205ENST00000537164 HSD52Q0P140 79 aa9.33□□□□□ -0.92
SFSWAP-205ENST00000537164 TMA7Q9Y2S6 64 aaKnown RBP9.31□□□□□ -0.92
SFSWAP-205ENST00000537164 TRIAP1O43715 76 aa9.3□□□□□ -0.92
SFSWAP-205ENST00000537164 GHRHP01286 108 aa9.3□□□□□ -0.92
SFSWAP-205ENST00000537164 Q6Q795 121 aa9.3□□□□□ -0.92
SFSWAP-205ENST00000537164 H3BUT2 72 aa9.29□□□□□ -0.92
SFSWAP-205ENST00000537164 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
SFSWAP-205ENST00000537164 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
SFSWAP-205ENST00000537164 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
SFSWAP-205ENST00000537164 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
SFSWAP-205ENST00000537164 K7ERJ3 54 aa9.23□□□□□ -0.93
SFSWAP-205ENST00000537164 RPL37P61927 97 aaKnown RBP9.23□□□□□ -0.93
SFSWAP-205ENST00000537164 H3BMG7 143 aa9.22□□□□□ -0.93
SFSWAP-205ENST00000537164 SS18L2Q9UHA2 77 aa9.22□□□□□ -0.93
SFSWAP-205ENST00000537164 H3BQ85 93 aa9.21□□□□□ -0.94
SFSWAP-205ENST00000537164 LST1O00453 97 aa9.21□□□□□ -0.94
SFSWAP-205ENST00000537164 COX6CP09669 75 aa9.2□□□□□ -0.94
SFSWAP-205ENST00000537164 FABP2P12104 132 aa9.2□□□□□ -0.94
SFSWAP-205ENST00000537164 PSMB2P49721 201 aa9.2□□□□□ -0.94
SFSWAP-205ENST00000537164 DNAL4O96015 105 aa9.18□□□□□ -0.94
SFSWAP-205ENST00000537164 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
SFSWAP-205ENST00000537164 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
SFSWAP-205ENST00000537164 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
SFSWAP-205ENST00000537164 TMEM256-PLSCR3K7ERE1 68 aa9.16□□□□□ -0.94
SFSWAP-205ENST00000537164 A0A087WSZ3 146 aa9.15□□□□□ -0.94
SFSWAP-205ENST00000537164 A0A1W2PNM2 257 aa9.15□□□□□ -0.94
SFSWAP-205ENST00000537164 TRACP01848 142 aa9.13□□□□□ -0.95
SFSWAP-205ENST00000537164 Q96NJ1 140 aa9.13□□□□□ -0.95
SFSWAP-205ENST00000537164 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
SFSWAP-205ENST00000537164 OBSCN-AS1Q96MR7 158 aa9.12□□□□□ -0.95
SFSWAP-205ENST00000537164 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
SFSWAP-205ENST00000537164 Q75L30 129 aa9.11□□□□□ -0.95
SFSWAP-205ENST00000537164 ANKRD29Q8N6D5 301 aa9.1□□□□□ -0.95
SFSWAP-205ENST00000537164 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
SFSWAP-205ENST00000537164 SMIM6P0DI80 62 aa9.07□□□□□ -0.96
SFSWAP-205ENST00000537164 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
SFSWAP-205ENST00000537164 M0R143 59 aa9.04□□□□□ -0.96
SFSWAP-205ENST00000537164 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
SFSWAP-205ENST00000537164 CCKP06307 115 aa9.03□□□□□ -0.96
SFSWAP-205ENST00000537164 MT1HP80294 61 aa9.03□□□□□ -0.96
SFSWAP-205ENST00000537164 ATP11AUNQ6ZP68 121 aa9.03□□□□□ -0.96
SFSWAP-205ENST00000537164 A0A1B0GV72 72 aa9.02□□□□□ -0.97
SFSWAP-205ENST00000537164 A8MUU9 505 aa9.02□□□□□ -0.97
SFSWAP-205ENST00000537164 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
SFSWAP-205ENST00000537164 LINC00472Q9H8W2 130 aa9□□□□□ -0.97
SFSWAP-205ENST00000537164 BAALC-AS2P0C853 105 aa8.98□□□□□ -0.97
SFSWAP-205ENST00000537164 IGKV4-1P06312 121 aa8.97□□□□□ -0.97
SFSWAP-205ENST00000537164 SIGMAR1Q99720 223 aa8.97□□□□□ -0.97
SFSWAP-205ENST00000537164 DSCR8Q96T75 97 aa8.96□□□□□ -0.98
SFSWAP-205ENST00000537164 DSCR10P59022 87 aa8.95□□□□□ -0.98
SFSWAP-205ENST00000537164 ATXN8Q156A1 80 aa8.95□□□□□ -0.98
SFSWAP-205ENST00000537164 LINC00313P59037 77 aa8.94□□□□□ -0.98
SFSWAP-205ENST00000537164 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
SFSWAP-205ENST00000537164 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
SFSWAP-205ENST00000537164 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
SFSWAP-205ENST00000537164 C9JAW5 83 aa8.92□□□□□ -0.98
SFSWAP-205ENST00000537164 TSTD3H0UI37 97 aa8.92□□□□□ -0.98
SFSWAP-205ENST00000537164 NAA38Q9BRA0 125 aaKnown RBP8.92□□□□□ -0.98
SFSWAP-205ENST00000537164 DEFB116Q30KQ4 102 aa8.91□□□□□ -0.98
SFSWAP-205ENST00000537164 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
SFSWAP-205ENST00000537164 COX6B2Q6YFQ2 88 aa8.9□□□□□ -0.98
SFSWAP-205ENST00000537164 VPS25Q9BRG1 176 aa8.9□□□□□ -0.98
SFSWAP-205ENST00000537164 LOC105371267A0A1B0GV96 52 aa8.89□□□□□ -0.99
SFSWAP-205ENST00000537164 JMJD7-PLA2G4BH0Y9G9 81 aa8.89□□□□□ -0.99
SFSWAP-205ENST00000537164 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
SFSWAP-205ENST00000537164 A0A1B0GW54 56 aa8.87□□□□□ -0.99
SFSWAP-205ENST00000537164 LYRM7Q5U5X0 104 aa8.87□□□□□ -0.99
SFSWAP-205ENST00000537164 Q6ZQT0 140 aa8.87□□□□□ -0.99
SFSWAP-205ENST00000537164 TRBV20-1A0A075B6N2 111 aa8.86□□□□□ -0.99
SFSWAP-205ENST00000537164 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms