RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PDE6GP18545 87 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 EGFEM1PQ0D2K5 195 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 Q75L30 129 aa2.42□□□□□ -2.02
MCF2-210ENST00000536274 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 DEFB130BP0DP73 79 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 DEFB130AP0DP74 79 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 COA5Q86WW8 74 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 USMG5Q96IX5 58 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 ZNF706Q9Y5V0 76 aaPredicted RBP2.41□□□□□ -2.02
MCF2-210ENST00000536274 ACANP16112 2415 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 LCE6AA0A183 80 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 MAPK1IP1LQ8NDC0 245 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 WWC2-AS2Q96NR7 200 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 LIMD2Q9BT23 127 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 KRTAP17-1Q9BYP8 105 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 MAP6D1Q9H9H5 199 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 COL6A5A8TX70 2615 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 LOC101927531A0A1B0GV80 90 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 IGLV6-57P01721 117 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 Q8IZM0 81 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 LINC00476Q8WZB0 136 aa2.41□□□□□ -2.02
MCF2-210ENST00000536274 PRKDCP78527 4128 aaKnown RBP2.41□□□□□ -2.02
MCF2-210ENST00000536274 IGHV4-30-4P0DP06 118 aa2.4□□□□□ -2.02
MCF2-210ENST00000536274 PKD1L1Q8TDX9 2849 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 DNAH6Q9C0G6 4158 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 SPAG11BQ08648 103 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 ODF3L2Q3SX64 289 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 CHCHD10Q8WYQ3 142 aaPredicted RBP2.4□□□□□ -2.03
MCF2-210ENST00000536274 KRTAP4-5Q9BYR2 181 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 MEGF8Q7Z7M0 2845 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 IGHV4-59P01825 116 aa2.4□□□□□ -2.03
MCF2-210ENST00000536274 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
MCF2-210ENST00000536274 H0Y9P7 68 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 CSAG1Q6PB30 78 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 Q8N377 158 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 C7orf33Q8WU49 177 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 IGLV1-51P01701 117 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 ELOF1P60002 83 aaKnown RBP2.39□□□□□ -2.03
MCF2-210ENST00000536274 STAB1Q9NY15 2570 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 DNAH9Q9NYC9 4486 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
MCF2-210ENST00000536274 DEFB4AO15263 64 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 REG3AQ06141 175 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 DNAH7Q8WXX0 4024 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 Q6ZR54 194 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 RPL37AP8A6NKH3 93 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 MP68P56378 58 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 ATRQ13535 2644 aa2.38□□□□□ -2.03
MCF2-210ENST00000536274 IGLV1-50A0A075B6I6 118 aa2.37□□□□□ -2.03
MCF2-210ENST00000536274 C1orf137Q5JT78 98 aa2.37□□□□□ -2.03
MCF2-210ENST00000536274 C6orf48Q9UBA6 75 aa2.37□□□□□ -2.03
MCF2-210ENST00000536274 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
MCF2-210ENST00000536274 KRTAP10-3P60369 221 aa2.36□□□□□ -2.03
MCF2-210ENST00000536274 CASC2Q6XLA1 102 aa2.36□□□□□ -2.03
MCF2-210ENST00000536274 GIG44P09565 113 aaPredicted RBP2.36□□□□□ -2.03
MCF2-210ENST00000536274 COX17Q14061 63 aa2.36□□□□□ -2.03
MCF2-210ENST00000536274 FLG2Q5D862 2391 aaPredicted RBP2.36□□□□□ -2.03
MCF2-210ENST00000536274 IGKV2D-24A0A075B6R9 120 aa2.36□□□□□ -2.03
MCF2-210ENST00000536274 NDUFB1O75438 58 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 C1orf134Q5TEV5 83 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 Q9BRP9 147 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 KCNQ1DNQ9H478 68 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 KRTAP23-1A1A580 65 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 H3BUA1 57 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 C9orf163Q8N9P6 203 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 VWFP04275 2813 aa2.35□□□□□ -2.03
MCF2-210ENST00000536274 DEFB114Q30KQ6 69 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 RYR2Q92736 4967 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 A0A087WSZ3 146 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 A0A096LNI7 61 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 FAM168BA1KXE4 195 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 HRES1P13985 223 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 LINC01558Q9Y6Z2 57 aa2.34□□□□□ -2.03
MCF2-210ENST00000536274 SACSQ9NZJ4 4579 aa2.34□□□□□ -2.04
MCF2-210ENST00000536274 HTN3P15516 51 aa2.34□□□□□ -2.04
MCF2-210ENST00000536274 Q8NBF4 154 aa2.34□□□□□ -2.04
MCF2-210ENST00000536274 NBEAL1Q6ZS30 2694 aa2.34□□□□□ -2.04
MCF2-210ENST00000536274 K7EIL1 84 aa2.33□□□□□ -2.04
MCF2-210ENST00000536274 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
MCF2-210ENST00000536274 IGLV8-61A0A075B6I0 122 aa2.33□□□□□ -2.04
MCF2-210ENST00000536274 IGLV5-48A0A075B6I7 105 aa2.33□□□□□ -2.04
MCF2-210ENST00000536274 CSNK1G2-AS1Q8NCQ2 148 aa2.33□□□□□ -2.04
MCF2-210ENST00000536274 CNBPP62633 177 aaKnown RBP2.33□□□□□ -2.04
MCF2-210ENST00000536274 SEC61BP60468 96 aaKnown RBP2.32□□□□□ -2.04
MCF2-210ENST00000536274 SPANXA2-OT1Q8N9U9 137 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 CAMK2N2Q96S95 79 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 RTL8CO15255 209 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 RYR3Q15413 4870 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 IGLV7-46A0A075B6I9 117 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 A0A1B0GUV1 79 aa2.32□□□□□ -2.04
MCF2-210ENST00000536274 KRTAP29-1A8MX34 341 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms