RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 M0R143 59 aa10.67□□□□□ -0.7
SSH3-209ENST00000532600 SPINK1P00995 79 aa10.67□□□□□ -0.7
SSH3-209ENST00000532600 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
SSH3-209ENST00000532600 SLC25A20O43772 301 aa10.66□□□□□ -0.7
SSH3-209ENST00000532600 LCE2AQ5TA79 106 aaPredicted RBP10.66□□□□□ -0.7
SSH3-209ENST00000532600 SMIM29Q86T20 159 aa10.66□□□□□ -0.7
SSH3-209ENST00000532600 Q8N377 158 aa10.66□□□□□ -0.7
SSH3-209ENST00000532600 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
SSH3-209ENST00000532600 Q6ZQY7 126 aa10.65□□□□□ -0.7
SSH3-209ENST00000532600 SSBP3-AS1Q7Z2R9 100 aa10.65□□□□□ -0.7
SSH3-209ENST00000532600 A0A0U1RQV1 116 aa10.64□□□□□ -0.71
SSH3-209ENST00000532600 H0YGX0 51 aa10.64□□□□□ -0.71
SSH3-209ENST00000532600 CLEC2BQ92478 149 aa10.62□□□□□ -0.71
SSH3-209ENST00000532600 PSMB2P49721 201 aa10.61□□□□□ -0.71
SSH3-209ENST00000532600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.61□□□□□ -0.71
SSH3-209ENST00000532600 RPS29P62273 56 aaKnown RBP10.6□□□□□ -0.71
SSH3-209ENST00000532600 BATFQ16520 125 aa10.59□□□□□ -0.71
SSH3-209ENST00000532600 C9orf153Q5TBE3 101 aa10.59□□□□□ -0.71
SSH3-209ENST00000532600 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
SSH3-209ENST00000532600 NAA38Q9BRA0 125 aaKnown RBP10.58□□□□□ -0.72
SSH3-209ENST00000532600 A0A1B0GX51 115 aa10.55□□□□□ -0.72
SSH3-209ENST00000532600 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
SSH3-209ENST00000532600 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
SSH3-209ENST00000532600 COX6CP09669 75 aa10.53□□□□□ -0.72
SSH3-209ENST00000532600 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
SSH3-209ENST00000532600 SNHG12Q9BXW3 62 aa10.51□□□□□ -0.73
SSH3-209ENST00000532600 LST1O00453 97 aa10.5□□□□□ -0.73
SSH3-209ENST00000532600 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
SSH3-209ENST00000532600 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
SSH3-209ENST00000532600 SNCGO76070 127 aa10.49□□□□□ -0.73
SSH3-209ENST00000532600 TAX1BP3O14907 124 aa10.48□□□□□ -0.73
SSH3-209ENST00000532600 OCIAD2Q56VL3 154 aa10.48□□□□□ -0.73
SSH3-209ENST00000532600 IGLV8-61A0A075B6I0 122 aa10.46□□□□□ -0.73
SSH3-209ENST00000532600 HRCT1Q6UXD1 115 aa10.46□□□□□ -0.73
SSH3-209ENST00000532600 TCL1BO95988 128 aa10.45□□□□□ -0.74
SSH3-209ENST00000532600 TRACP01848 142 aa10.45□□□□□ -0.74
SSH3-209ENST00000532600 XP32Q5T750 250 aa10.45□□□□□ -0.74
SSH3-209ENST00000532600 KRTAP9-2Q9BYQ4 174 aa10.45□□□□□ -0.74
SSH3-209ENST00000532600 PCP4L1A6NKN8 68 aa10.44□□□□□ -0.74
SSH3-209ENST00000532600 F8WEM9 126 aa10.44□□□□□ -0.74
SSH3-209ENST00000532600 H3BUT2 72 aa10.44□□□□□ -0.74
SSH3-209ENST00000532600 DNAL4O96015 105 aa10.44□□□□□ -0.74
SSH3-209ENST00000532600 C9orf118A6NHY6 69 aa10.43□□□□□ -0.74
SSH3-209ENST00000532600 FABP2P12104 132 aa10.43□□□□□ -0.74
SSH3-209ENST00000532600 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
SSH3-209ENST00000532600 ORMDL1Q9P0S3 153 aa10.43□□□□□ -0.74
SSH3-209ENST00000532600 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
SSH3-209ENST00000532600 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
SSH3-209ENST00000532600 CD164Q04900 197 aa10.39□□□□□ -0.75
SSH3-209ENST00000532600 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
SSH3-209ENST00000532600 Q6JHZ5 121 aa10.38□□□□□ -0.75
SSH3-209ENST00000532600 A0A1W2PPM0 123 aa10.37□□□□□ -0.75
SSH3-209ENST00000532600 GHRHP01286 108 aa10.36□□□□□ -0.75
SSH3-209ENST00000532600 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
SSH3-209ENST00000532600 H3BMG7 143 aa10.35□□□□□ -0.75
SSH3-209ENST00000532600 TMEM256-PLSCR3K7ERE1 68 aa10.35□□□□□ -0.75
SSH3-209ENST00000532600 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
SSH3-209ENST00000532600 A0A1B0GV72 72 aa10.34□□□□□ -0.75
SSH3-209ENST00000532600 H3BQ85 93 aa10.34□□□□□ -0.75
SSH3-209ENST00000532600 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SSH3-209ENST00000532600 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
SSH3-209ENST00000532600 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
SSH3-209ENST00000532600 TRBV20-1A0A075B6N2 111 aa10.32□□□□□ -0.76
SSH3-209ENST00000532600 Q5XG85 94 aa10.31□□□□□ -0.76
SSH3-209ENST00000532600 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
SSH3-209ENST00000532600 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
SSH3-209ENST00000532600 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
SSH3-209ENST00000532600 ANKRD29Q8N6D5 301 aa10.29□□□□□ -0.76
SSH3-209ENST00000532600 KRTAP19-2Q3LHN2 52 aa10.28□□□□□ -0.76
SSH3-209ENST00000532600 A0A1W2PNM2 257 aa10.27□□□□□ -0.77
SSH3-209ENST00000532600 C9JAW5 83 aa10.27□□□□□ -0.77
SSH3-209ENST00000532600 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
SSH3-209ENST00000532600 Q6Q795 121 aa10.26□□□□□ -0.77
SSH3-209ENST00000532600 PCOTHQ58A44 107 aa10.25□□□□□ -0.77
SSH3-209ENST00000532600 MTURNQ8N3F0 131 aa10.24□□□□□ -0.77
SSH3-209ENST00000532600 SPCS1Q9Y6A9 102 aa10.24□□□□□ -0.77
SSH3-209ENST00000532600 TEN1Q86WV5 123 aa10.23□□□□□ -0.77
SSH3-209ENST00000532600 TRBV7-4A0A0J9YYF1 115 aa10.22□□□□□ -0.77
SSH3-209ENST00000532600 RBM3P98179 157 aaKnown RBP10.2□□□□□ -0.78
SSH3-209ENST00000532600 A0A087WSZ3 146 aa10.18□□□□□ -0.78
SSH3-209ENST00000532600 K7EP34 96 aa10.17□□□□□ -0.78
SSH3-209ENST00000532600 OBSCN-AS1Q96MR7 158 aa10.17□□□□□ -0.78
SSH3-209ENST00000532600 H3BT86 120 aa10.16□□□□□ -0.78
SSH3-209ENST00000532600 CCKP06307 115 aa10.16□□□□□ -0.78
SSH3-209ENST00000532600 SMCPP49901 116 aaPredicted RBP10.15□□□□□ -0.78
SSH3-209ENST00000532600 DSCR8Q96T75 97 aa10.15□□□□□ -0.78
SSH3-209ENST00000532600 PRO0461Q9UI25 63 aa10.14□□□□□ -0.79
SSH3-209ENST00000532600 JMJD7-PLA2G4BH0Y9G9 81 aa10.13□□□□□ -0.79
SSH3-209ENST00000532600 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
SSH3-209ENST00000532600 MT1HP80294 61 aa10.12□□□□□ -0.79
SSH3-209ENST00000532600 Q6ZQT0 140 aa10.12□□□□□ -0.79
SSH3-209ENST00000532600 Q96NJ1 140 aa10.12□□□□□ -0.79
SSH3-209ENST00000532600 LOC110117498A0A087WWA1 95 aa10.11□□□□□ -0.79
SSH3-209ENST00000532600 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
SSH3-209ENST00000532600 C14orf132Q9NPU4 83 aa10.11□□□□□ -0.79
SSH3-209ENST00000532600 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
SSH3-209ENST00000532600 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
SSH3-209ENST00000532600 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
SSH3-209ENST00000532600 GTF2H5Q6ZYL4 71 aa10.03□□□□□ -0.8
SSH3-209ENST00000532600 PDE6GP18545 87 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms