RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CXCL6P80162 114 aa9.93□□□□□ -0.82
PPFIA1-222ENST00000532504 SPAG11AQ6PDA7 123 aa9.93□□□□□ -0.82
PPFIA1-222ENST00000532504 KRTAP10-2P60368 255 aa9.92□□□□□ -0.82
PPFIA1-222ENST00000532504 ATP11AUNQ6ZP68 121 aa9.92□□□□□ -0.82
PPFIA1-222ENST00000532504 TRAV7A0A075B6U4 112 aa9.92□□□□□ -0.82
PPFIA1-222ENST00000532504 FBN2P35556 2912 aa9.92□□□□□ -0.82
PPFIA1-222ENST00000532504 PRO0461Q9UI25 63 aa9.91□□□□□ -0.82
PPFIA1-222ENST00000532504 COX7CP15954 63 aa9.89□□□□□ -0.83
PPFIA1-222ENST00000532504 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
PPFIA1-222ENST00000532504 A0A1B0GW54 56 aa9.89□□□□□ -0.83
PPFIA1-222ENST00000532504 PRR26Q8N8Z3 221 aa9.89□□□□□ -0.83
PPFIA1-222ENST00000532504 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
PPFIA1-222ENST00000532504 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
PPFIA1-222ENST00000532504 OBSCN-AS1Q96MR7 158 aa9.87□□□□□ -0.83
PPFIA1-222ENST00000532504 DSCR10P59022 87 aa9.86□□□□□ -0.83
PPFIA1-222ENST00000532504 C1orf64Q8NEQ6 169 aa9.86□□□□□ -0.83
PPFIA1-222ENST00000532504 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
PPFIA1-222ENST00000532504 NDUFC1O43677 76 aa9.85□□□□□ -0.83
PPFIA1-222ENST00000532504 SERP1Q9Y6X1 66 aa9.85□□□□□ -0.83
PPFIA1-222ENST00000532504 TRBV7-7A0A0K0K1E9 115 aa9.84□□□□□ -0.83
PPFIA1-222ENST00000532504 CCDC179H3BU77 68 aa9.84□□□□□ -0.83
PPFIA1-222ENST00000532504 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
PPFIA1-222ENST00000532504 K7EQZ3 153 aa9.81□□□□□ -0.84
PPFIA1-222ENST00000532504 A8MWP4 228 aa9.81□□□□□ -0.84
PPFIA1-222ENST00000532504 KRTAP26-1Q6PEX3 210 aa9.81□□□□□ -0.84
PPFIA1-222ENST00000532504 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
PPFIA1-222ENST00000532504 Q6ZR54 194 aa9.81□□□□□ -0.84
PPFIA1-222ENST00000532504 Q5VSD8 79 aa9.8□□□□□ -0.84
PPFIA1-222ENST00000532504 TMEM254Q8TBM7 123 aa9.8□□□□□ -0.84
PPFIA1-222ENST00000532504 TP53AIP1Q9HCN2 124 aa9.79□□□□□ -0.84
PPFIA1-222ENST00000532504 MXRA5Q9NR99 2828 aa9.79□□□□□ -0.84
PPFIA1-222ENST00000532504 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
PPFIA1-222ENST00000532504 Q8NDZ9 215 aa9.78□□□□□ -0.84
PPFIA1-222ENST00000532504 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
PPFIA1-222ENST00000532504 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
PPFIA1-222ENST00000532504 PRR15LQ9BU68 103 aa9.74□□□□□ -0.85
PPFIA1-222ENST00000532504 ZFHX4Q86UP3 3567 aa9.73□□□□□ -0.85
PPFIA1-222ENST00000532504 A0A1W2PNM2 257 aa9.72□□□□□ -0.85
PPFIA1-222ENST00000532504 SMG1Q96Q15 3661 aaKnown RBP9.71□□□□□ -0.85
PPFIA1-222ENST00000532504 C8orf17Q9NRJ1 99 aa9.71□□□□□ -0.85
PPFIA1-222ENST00000532504 A0A1B0GVX0 72 aa9.71□□□□□ -0.86
PPFIA1-222ENST00000532504 TRAV22A0A0B4J277 110 aa9.7□□□□□ -0.86
PPFIA1-222ENST00000532504 PANO1I0J062 215 aa9.7□□□□□ -0.86
PPFIA1-222ENST00000532504 ATP5EP56381 51 aaPredicted RBP9.7□□□□□ -0.86
PPFIA1-222ENST00000532504 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
PPFIA1-222ENST00000532504 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
PPFIA1-222ENST00000532504 K7ERS5 55 aa9.67□□□□□ -0.86
PPFIA1-222ENST00000532504 NBPF19A0A087WUL8 3843 aa9.67□□□□□ -0.86
PPFIA1-222ENST00000532504 PDZD2O15018 2839 aa9.65□□□□□ -0.86
PPFIA1-222ENST00000532504 IGLV5-48A0A075B6I7 105 aa9.62□□□□□ -0.87
PPFIA1-222ENST00000532504 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
PPFIA1-222ENST00000532504 DMBT1Q9UGM3 2413 aaPredicted RBP9.61□□□□□ -0.87
PPFIA1-222ENST00000532504 SPRR1AP35321 89 aa9.6□□□□□ -0.87
PPFIA1-222ENST00000532504 BRK1Q8WUW1 75 aa9.6□□□□□ -0.87
PPFIA1-222ENST00000532504 OTOGQ6ZRI0 2925 aa9.59□□□□□ -0.87
PPFIA1-222ENST00000532504 A6NED7 52 aa9.59□□□□□ -0.87
PPFIA1-222ENST00000532504 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
PPFIA1-222ENST00000532504 ZFHX3Q15911 3703 aa9.59□□□□□ -0.87
PPFIA1-222ENST00000532504 V9GYY9 64 aa9.58□□□□□ -0.88
PPFIA1-222ENST00000532504 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
PPFIA1-222ENST00000532504 ACYP2P14621 99 aa9.55□□□□□ -0.88
PPFIA1-222ENST00000532504 CD164Q04900 197 aa9.55□□□□□ -0.88
PPFIA1-222ENST00000532504 Q6ZSA8 131 aa9.51□□□□□ -0.89
PPFIA1-222ENST00000532504 H3BPC8 53 aa9.51□□□□□ -0.89
PPFIA1-222ENST00000532504 CELSR1Q9NYQ6 3014 aa9.5□□□□□ -0.89
PPFIA1-222ENST00000532504 TENM1Q9UKZ4 2725 aa9.48□□□□□ -0.89
PPFIA1-222ENST00000532504 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
PPFIA1-222ENST00000532504 TENM2Q9NT68 2774 aa9.47□□□□□ -0.89
PPFIA1-222ENST00000532504 PKD1L1Q8TDX9 2849 aa9.46□□□□□ -0.89
PPFIA1-222ENST00000532504 PSPHP1O15172 72 aa9.46□□□□□ -0.9
PPFIA1-222ENST00000532504 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
PPFIA1-222ENST00000532504 SMIM26A0A096LP01 95 aa9.44□□□□□ -0.9
PPFIA1-222ENST00000532504 SPRR1BP22528 89 aa9.42□□□□□ -0.9
PPFIA1-222ENST00000532504 FBN1P35555 2871 aaKnown RBP9.41□□□□□ -0.9
PPFIA1-222ENST00000532504 CSMD1Q96PZ7 3565 aa9.41□□□□□ -0.9
PPFIA1-222ENST00000532504 TENM3Q9P273 2699 aa9.4□□□□□ -0.9
PPFIA1-222ENST00000532504 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
PPFIA1-222ENST00000532504 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
PPFIA1-222ENST00000532504 Q8N1X5 172 aa9.39□□□□□ -0.91
PPFIA1-222ENST00000532504 A0A1B0GU69 56 aa9.39□□□□□ -0.91
PPFIA1-222ENST00000532504 A0A087X002 238 aa9.37□□□□□ -0.91
PPFIA1-222ENST00000532504 M0R2T5 61 aa9.35□□□□□ -0.91
PPFIA1-222ENST00000532504 SVIPQ8NHG7 77 aa9.35□□□□□ -0.91
PPFIA1-222ENST00000532504 CSMD2Q7Z408 3487 aa9.35□□□□□ -0.91
PPFIA1-222ENST00000532504 A0A0U1RQV1 116 aa9.34□□□□□ -0.92
PPFIA1-222ENST00000532504 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
PPFIA1-222ENST00000532504 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
PPFIA1-222ENST00000532504 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
PPFIA1-222ENST00000532504 LINC00483Q53H64 154 aa9.29□□□□□ -0.92
PPFIA1-222ENST00000532504 SPENQ96T58 3664 aaKnown RBP9.28□□□□□ -0.92
PPFIA1-222ENST00000532504 COA5Q86WW8 74 aa9.25□□□□□ -0.93
PPFIA1-222ENST00000532504 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
PPFIA1-222ENST00000532504 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
PPFIA1-222ENST00000532504 LINC00472Q9H8W2 130 aa9.24□□□□□ -0.93
PPFIA1-222ENST00000532504 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
PPFIA1-222ENST00000532504 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
PPFIA1-222ENST00000532504 VWFP04275 2813 aa9.22□□□□□ -0.93
PPFIA1-222ENST00000532504 OXTP01178 125 aa9.19□□□□□ -0.94
PPFIA1-222ENST00000532504 TGP01266 2768 aa9.18□□□□□ -0.94
PPFIA1-222ENST00000532504 SVEP1Q4LDE5 3571 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms