RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 K7EP34 96 aa6.42□□□□□ -1.38
SOX6-213ENST00000530378 INAFM2P0DMQ5 153 aa6.42□□□□□ -1.38
SOX6-213ENST00000530378 C9JAW5 83 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 C3orf22Q8N5N4 141 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
SOX6-213ENST00000530378 MYCBP2O75592 4640 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 SNCGO76070 127 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 TRACP01848 142 aa6.41□□□□□ -1.38
SOX6-213ENST00000530378 SPRR4Q96PI1 79 aa6.4□□□□□ -1.38
SOX6-213ENST00000530378 HERC1Q15751 4861 aa6.4□□□□□ -1.39
SOX6-213ENST00000530378 LINC01547P58512 204 aaPredicted RBP6.39□□□□□ -1.39
SOX6-213ENST00000530378 SPINK6Q6UWN8 80 aa6.39□□□□□ -1.39
SOX6-213ENST00000530378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
SOX6-213ENST00000530378 A0A1B0GX51 115 aa6.39□□□□□ -1.39
SOX6-213ENST00000530378 K7ERU9 68 aa6.39□□□□□ -1.39
SOX6-213ENST00000530378 UBE2V1Q13404 147 aa6.39□□□□□ -1.39
SOX6-213ENST00000530378 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
SOX6-213ENST00000530378 Q8N377 158 aa6.38□□□□□ -1.39
SOX6-213ENST00000530378 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
SOX6-213ENST00000530378 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
SOX6-213ENST00000530378 OCIAD2Q56VL3 154 aa6.37□□□□□ -1.39
SOX6-213ENST00000530378 GTF2H5Q6ZYL4 71 aa6.37□□□□□ -1.39
SOX6-213ENST00000530378 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SOX6-213ENST00000530378 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
SOX6-213ENST00000530378 IGLV5-48A0A075B6I7 105 aa6.36□□□□□ -1.39
SOX6-213ENST00000530378 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
SOX6-213ENST00000530378 BAALC-AS2P0C853 105 aa6.36□□□□□ -1.39
SOX6-213ENST00000530378 IGLV9-49A0A0B4J1Y8 123 aa6.36□□□□□ -1.39
SOX6-213ENST00000530378 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
SOX6-213ENST00000530378 A0A087X002 238 aa6.35□□□□□ -1.39
SOX6-213ENST00000530378 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.4
SOX6-213ENST00000530378 LINC00483Q53H64 154 aa6.34□□□□□ -1.4
SOX6-213ENST00000530378 SMIM29Q86T20 159 aa6.34□□□□□ -1.4
SOX6-213ENST00000530378 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.4
SOX6-213ENST00000530378 C9orf153Q5TBE3 101 aa6.33□□□□□ -1.4
SOX6-213ENST00000530378 PRR26Q8N8Z3 221 aa6.33□□□□□ -1.4
SOX6-213ENST00000530378 PRO0461Q9UI25 63 aa6.33□□□□□ -1.4
SOX6-213ENST00000530378 A0A0G2JQZ4 141 aa6.32□□□□□ -1.4
SOX6-213ENST00000530378 SPRR1BP22528 89 aa6.32□□□□□ -1.4
SOX6-213ENST00000530378 MOBPQ13875 183 aa6.32□□□□□ -1.4
SOX6-213ENST00000530378 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
SOX6-213ENST00000530378 NDUFV3P56181 108 aaKnown RBP6.31□□□□□ -1.4
SOX6-213ENST00000530378 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
SOX6-213ENST00000530378 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
SOX6-213ENST00000530378 TNXBP22105 4242 aa6.3□□□□□ -1.4
SOX6-213ENST00000530378 F8WEM9 126 aa6.3□□□□□ -1.4
SOX6-213ENST00000530378 H3BT86 120 aa6.29□□□□□ -1.4
SOX6-213ENST00000530378 CRYGAP11844 174 aa6.29□□□□□ -1.4
SOX6-213ENST00000530378 C5orf47Q569G3 176 aa6.29□□□□□ -1.4
SOX6-213ENST00000530378 FAM229BQ4G0N7 80 aa6.28□□□□□ -1.4
SOX6-213ENST00000530378 PPDPFLQ8WWR9 84 aa6.28□□□□□ -1.4
SOX6-213ENST00000530378 UBR4Q5T4S7 5183 aa6.28□□□□□ -1.4
SOX6-213ENST00000530378 C14orf132Q9NPU4 83 aa6.27□□□□□ -1.41
SOX6-213ENST00000530378 F8W1H4 67 aa6.26□□□□□ -1.41
SOX6-213ENST00000530378 ETDBQ3ZM63 59 aa6.26□□□□□ -1.41
SOX6-213ENST00000530378 HRCT1Q6UXD1 115 aa6.26□□□□□ -1.41
SOX6-213ENST00000530378 Q8NBF4 154 aa6.26□□□□□ -1.41
SOX6-213ENST00000530378 TYMSOSQ8TAI1 123 aa6.26□□□□□ -1.41
SOX6-213ENST00000530378 H3BQ85 93 aa6.25□□□□□ -1.41
SOX6-213ENST00000530378 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
SOX6-213ENST00000530378 LINC01600Q96MT4 127 aa6.25□□□□□ -1.41
SOX6-213ENST00000530378 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
SOX6-213ENST00000530378 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
SOX6-213ENST00000530378 H3BS24 57 aa6.23□□□□□ -1.41
SOX6-213ENST00000530378 TEN1Q86WV5 123 aa6.22□□□□□ -1.41
SOX6-213ENST00000530378 DSCR8Q96T75 97 aa6.22□□□□□ -1.41
SOX6-213ENST00000530378 IGLV8-61A0A075B6I0 122 aa6.21□□□□□ -1.42
SOX6-213ENST00000530378 JMJD7-PLA2G4BH0Y9G9 81 aa6.21□□□□□ -1.42
SOX6-213ENST00000530378 SIGMAR1Q99720 223 aa6.21□□□□□ -1.42
SOX6-213ENST00000530378 OBSCN-AS1Q96MR7 158 aa6.2□□□□□ -1.42
SOX6-213ENST00000530378 TRBV7-4A0A0J9YYF1 115 aa6.2□□□□□ -1.42
SOX6-213ENST00000530378 CCKP06307 115 aa6.2□□□□□ -1.42
SOX6-213ENST00000530378 MT1HL1P0DM35 61 aa6.2□□□□□ -1.42
SOX6-213ENST00000530378 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
SOX6-213ENST00000530378 Q6JHZ5 121 aa6.19□□□□□ -1.42
SOX6-213ENST00000530378 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
SOX6-213ENST00000530378 SS18L2Q9UHA2 77 aa6.19□□□□□ -1.42
SOX6-213ENST00000530378 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
SOX6-213ENST00000530378 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
SOX6-213ENST00000530378 KRTAP4-12Q9BQ66 201 aa6.18□□□□□ -1.42
SOX6-213ENST00000530378 Q6ZQT0 140 aa6.18□□□□□ -1.42
SOX6-213ENST00000530378 OXTP01178 125 aa6.17□□□□□ -1.42
SOX6-213ENST00000530378 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
SOX6-213ENST00000530378 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
SOX6-213ENST00000530378 KRTAP29-1A8MX34 341 aaPredicted RBP6.15□□□□□ -1.43
SOX6-213ENST00000530378 A0A087WSZ3 146 aa6.14□□□□□ -1.43
SOX6-213ENST00000530378 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
SOX6-213ENST00000530378 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
SOX6-213ENST00000530378 PDE6GP18545 87 aa6.11□□□□□ -1.43
SOX6-213ENST00000530378 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
SOX6-213ENST00000530378 SPINK1P00995 79 aa6.1□□□□□ -1.43
SOX6-213ENST00000530378 CD164Q04900 197 aa6.1□□□□□ -1.43
SOX6-213ENST00000530378 Q6Q795 121 aa6.09□□□□□ -1.43
SOX6-213ENST00000530378 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.44
SOX6-213ENST00000530378 DEFB116Q30KQ4 102 aa6.08□□□□□ -1.44
SOX6-213ENST00000530378 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
SOX6-213ENST00000530378 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
SOX6-213ENST00000530378 LINC00846Q9NV44 126 aa6.06□□□□□ -1.44
SOX6-213ENST00000530378 J3QR89 54 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms