RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
CAPN1-209ENST00000527469 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
CAPN1-209ENST00000527469 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
CAPN1-209ENST00000527469 H0YGX0 51 aa7.58□□□□□ -1.2
CAPN1-209ENST00000527469 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.58□□□□□ -1.2
CAPN1-209ENST00000527469 RNF213Q63HN8 5207 aa7.58□□□□□ -1.2
CAPN1-209ENST00000527469 FXYD2P54710 66 aa7.57□□□□□ -1.2
CAPN1-209ENST00000527469 CD164Q04900 197 aa7.57□□□□□ -1.2
CAPN1-209ENST00000527469 SNHG12Q9BXW3 62 aa7.56□□□□□ -1.2
CAPN1-209ENST00000527469 PPDPFLQ8WWR9 84 aa7.54□□□□□ -1.2
CAPN1-209ENST00000527469 PSMB2P49721 201 aa7.53□□□□□ -1.2
CAPN1-209ENST00000527469 OCIAD2Q56VL3 154 aa7.53□□□□□ -1.2
CAPN1-209ENST00000527469 GHRHP01286 108 aa7.52□□□□□ -1.21
CAPN1-209ENST00000527469 Q6JHZ5 121 aa7.52□□□□□ -1.21
CAPN1-209ENST00000527469 A0A0G2JQZ4 141 aa7.51□□□□□ -1.21
CAPN1-209ENST00000527469 K7ERJ3 54 aa7.51□□□□□ -1.21
CAPN1-209ENST00000527469 KRTAP13-3Q3SY46 172 aa7.51□□□□□ -1.21
CAPN1-209ENST00000527469 TCL1BO95988 128 aa7.5□□□□□ -1.21
CAPN1-209ENST00000527469 COX6CP09669 75 aa7.5□□□□□ -1.21
CAPN1-209ENST00000527469 A0A1B0GX51 115 aa7.49□□□□□ -1.21
CAPN1-209ENST00000527469 TRIAP1O43715 76 aa7.49□□□□□ -1.21
CAPN1-209ENST00000527469 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
CAPN1-209ENST00000527469 FAM218AQ96MZ4 157 aa7.49□□□□□ -1.21
CAPN1-209ENST00000527469 DNAL4O96015 105 aa7.48□□□□□ -1.21
CAPN1-209ENST00000527469 FABP2P12104 132 aa7.47□□□□□ -1.21
CAPN1-209ENST00000527469 IGLV8-61A0A075B6I0 122 aa7.46□□□□□ -1.22
CAPN1-209ENST00000527469 H3BUT2 72 aa7.46□□□□□ -1.22
CAPN1-209ENST00000527469 SMIM6P0DI80 62 aa7.46□□□□□ -1.22
CAPN1-209ENST00000527469 Q5XG85 94 aa7.46□□□□□ -1.22
CAPN1-209ENST00000527469 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
CAPN1-209ENST00000527469 A0A0U1RQV1 116 aa7.44□□□□□ -1.22
CAPN1-209ENST00000527469 SCGB1C2P0DMR2 95 aa7.44□□□□□ -1.22
CAPN1-209ENST00000527469 NDUFV3P56181 108 aaKnown RBP7.44□□□□□ -1.22
CAPN1-209ENST00000527469 M0R143 59 aa7.43□□□□□ -1.22
CAPN1-209ENST00000527469 TRBV7-7A0A0K0K1E9 115 aa7.42□□□□□ -1.22
CAPN1-209ENST00000527469 H3BQ85 93 aa7.42□□□□□ -1.22
CAPN1-209ENST00000527469 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
CAPN1-209ENST00000527469 ORMDL1Q9P0S3 153 aa7.42□□□□□ -1.22
CAPN1-209ENST00000527469 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
CAPN1-209ENST00000527469 H3BMG7 143 aa7.41□□□□□ -1.22
CAPN1-209ENST00000527469 SEC61BP60468 96 aaKnown RBP7.41□□□□□ -1.22
CAPN1-209ENST00000527469 TSTD3H0UI37 97 aa7.39□□□□□ -1.23
CAPN1-209ENST00000527469 XP32Q5T750 250 aa7.38□□□□□ -1.23
CAPN1-209ENST00000527469 SS18L2Q9UHA2 77 aa7.38□□□□□ -1.23
CAPN1-209ENST00000527469 MUC2Q02817 5179 aa7.38□□□□□ -1.23
CAPN1-209ENST00000527469 TMEM256-PLSCR3K7ERE1 68 aa7.37□□□□□ -1.23
CAPN1-209ENST00000527469 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
CAPN1-209ENST00000527469 TEN1Q86WV5 123 aa7.37□□□□□ -1.23
CAPN1-209ENST00000527469 A0A1B0GV72 72 aa7.36□□□□□ -1.23
CAPN1-209ENST00000527469 LST1O00453 97 aa7.35□□□□□ -1.23
CAPN1-209ENST00000527469 TRACP01848 142 aa7.35□□□□□ -1.23
CAPN1-209ENST00000527469 Q6Q795 121 aa7.34□□□□□ -1.23
CAPN1-209ENST00000527469 ANKRD29Q8N6D5 301 aa7.34□□□□□ -1.23
CAPN1-209ENST00000527469 BATFQ16520 125 aa7.32□□□□□ -1.24
CAPN1-209ENST00000527469 A0A087WSZ3 146 aa7.31□□□□□ -1.24
CAPN1-209ENST00000527469 LOC105371267A0A1B0GV96 52 aa7.31□□□□□ -1.24
CAPN1-209ENST00000527469 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
CAPN1-209ENST00000527469 MUC17Q685J3 4493 aa7.29□□□□□ -1.24
CAPN1-209ENST00000527469 ATXN8Q156A1 80 aa7.29□□□□□ -1.24
CAPN1-209ENST00000527469 LYRM7Q5U5X0 104 aa7.29□□□□□ -1.24
CAPN1-209ENST00000527469 NAA38Q9BRA0 125 aaKnown RBP7.29□□□□□ -1.24
CAPN1-209ENST00000527469 BAALC-AS2P0C853 105 aa7.27□□□□□ -1.25
CAPN1-209ENST00000527469 TRBV7-4A0A0J9YYF1 115 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 A0A1W2PNM2 257 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 CCKP06307 115 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 RBM3P98179 157 aaKnown RBP7.26□□□□□ -1.25
CAPN1-209ENST00000527469 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 DSCR8Q96T75 97 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 VPS25Q9BRG1 176 aa7.26□□□□□ -1.25
CAPN1-209ENST00000527469 OBSCN-AS1Q96MR7 158 aa7.25□□□□□ -1.25
CAPN1-209ENST00000527469 SIGMAR1Q99720 223 aa7.24□□□□□ -1.25
CAPN1-209ENST00000527469 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
CAPN1-209ENST00000527469 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
CAPN1-209ENST00000527469 C9JAW5 83 aa7.21□□□□□ -1.26
CAPN1-209ENST00000527469 Q96NJ1 140 aa7.2□□□□□ -1.26
CAPN1-209ENST00000527469 JMJD7-PLA2G4BH0Y9G9 81 aa7.19□□□□□ -1.26
CAPN1-209ENST00000527469 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
CAPN1-209ENST00000527469 KRTAP4-1Q9BYQ7 146 aa7.19□□□□□ -1.26
CAPN1-209ENST00000527469 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
CAPN1-209ENST00000527469 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
CAPN1-209ENST00000527469 FAT4Q6V0I7 4981 aa7.16□□□□□ -1.26
CAPN1-209ENST00000527469 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
CAPN1-209ENST00000527469 DEFB116Q30KQ4 102 aa7.15□□□□□ -1.26
CAPN1-209ENST00000527469 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
CAPN1-209ENST00000527469 PDE6GP18545 87 aa7.14□□□□□ -1.27
CAPN1-209ENST00000527469 DSCR10P59022 87 aa7.14□□□□□ -1.27
CAPN1-209ENST00000527469 Q75L30 129 aa7.14□□□□□ -1.27
CAPN1-209ENST00000527469 TAX1BP3O14907 124 aa7.13□□□□□ -1.27
CAPN1-209ENST00000527469 LINC00313P59037 77 aa7.12□□□□□ -1.27
CAPN1-209ENST00000527469 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
CAPN1-209ENST00000527469 LOC110117498A0A087WWA1 95 aa7.11□□□□□ -1.27
CAPN1-209ENST00000527469 IGHV6-1A0A0B4J1U7 121 aa7.11□□□□□ -1.27
CAPN1-209ENST00000527469 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
CAPN1-209ENST00000527469 Q6ZQT0 140 aa7.1□□□□□ -1.27
CAPN1-209ENST00000527469 A0A1B0GW54 56 aa7.09□□□□□ -1.27
CAPN1-209ENST00000527469 J3KT08 172 aa7.09□□□□□ -1.27
CAPN1-209ENST00000527469 H3BT86 120 aa7.08□□□□□ -1.28
CAPN1-209ENST00000527469 COL5A1-AS1Q5SY13 56 aa7.08□□□□□ -1.28
CAPN1-209ENST00000527469 LCE2AQ5TA79 106 aaPredicted RBP7.08□□□□□ -1.28
CAPN1-209ENST00000527469 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms