RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 TNRC18O15417 2968 aaPredicted RBP10.7□□□□□ -0.7
BEST1-203ENST00000524877 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
BEST1-203ENST00000524877 C8orf17Q9NRJ1 99 aa10.7□□□□□ -0.7
BEST1-203ENST00000524877 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
BEST1-203ENST00000524877 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
BEST1-203ENST00000524877 BPTFQ12830 3046 aa10.67□□□□□ -0.7
BEST1-203ENST00000524877 LINC01558Q9Y6Z2 57 aa10.67□□□□□ -0.7
BEST1-203ENST00000524877 MGAQ8IWI9 3026 aa10.66□□□□□ -0.7
BEST1-203ENST00000524877 UNC79Q9P2D8 2635 aa10.64□□□□□ -0.71
BEST1-203ENST00000524877 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
BEST1-203ENST00000524877 KRTAP10-1P60331 282 aa10.63□□□□□ -0.71
BEST1-203ENST00000524877 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
BEST1-203ENST00000524877 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
BEST1-203ENST00000524877 Q6ZR54 194 aa10.59□□□□□ -0.71
BEST1-203ENST00000524877 Q6ZSA8 131 aa10.59□□□□□ -0.71
BEST1-203ENST00000524877 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
BEST1-203ENST00000524877 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
BEST1-203ENST00000524877 CDH23Q9H251 3354 aa10.52□□□□□ -0.73
BEST1-203ENST00000524877 DSPP15924 2871 aaKnown RBP10.51□□□□□ -0.73
BEST1-203ENST00000524877 IGLV5-48A0A075B6I7 105 aa10.49□□□□□ -0.73
BEST1-203ENST00000524877 SPINK7P58062 85 aa10.49□□□□□ -0.73
BEST1-203ENST00000524877 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
BEST1-203ENST00000524877 TEP1Q99973 2627 aaKnown RBP10.48□□□□□ -0.73
BEST1-203ENST00000524877 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
BEST1-203ENST00000524877 CENPEQ02224 2701 aa10.48□□□□□ -0.73
BEST1-203ENST00000524877 A0A0D9SG42 100 aa10.44□□□□□ -0.74
BEST1-203ENST00000524877 SPRR1AP35321 89 aa10.41□□□□□ -0.74
BEST1-203ENST00000524877 M0R2T5 61 aa10.41□□□□□ -0.74
BEST1-203ENST00000524877 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
BEST1-203ENST00000524877 SEC61BP60468 96 aaKnown RBP10.38□□□□□ -0.75
BEST1-203ENST00000524877 WDFY4Q6ZS81 3184 aa10.37□□□□□ -0.75
BEST1-203ENST00000524877 A0A1B0GU33 70 aa10.37□□□□□ -0.75
BEST1-203ENST00000524877 UNC80Q8N2C7 3258 aa10.36□□□□□ -0.75
BEST1-203ENST00000524877 GCN1Q92616 2671 aaKnown RBP10.35□□□□□ -0.75
BEST1-203ENST00000524877 CHD6Q8TD26 2715 aa10.35□□□□□ -0.75
BEST1-203ENST00000524877 COL6A5A8TX70 2615 aa10.34□□□□□ -0.75
BEST1-203ENST00000524877 A6NN06 94 aa10.33□□□□□ -0.76
BEST1-203ENST00000524877 TEX15Q9BXT5 2789 aa10.32□□□□□ -0.76
BEST1-203ENST00000524877 SPRR1BP22528 89 aa10.31□□□□□ -0.76
BEST1-203ENST00000524877 Q8NDZ9 215 aa10.28□□□□□ -0.76
BEST1-203ENST00000524877 HRES1P13985 223 aa10.28□□□□□ -0.76
BEST1-203ENST00000524877 Q6ZRN7 208 aaPredicted RBP10.27□□□□□ -0.77
BEST1-203ENST00000524877 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
BEST1-203ENST00000524877 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
BEST1-203ENST00000524877 PANO1I0J062 215 aa10.24□□□□□ -0.77
BEST1-203ENST00000524877 Q8N1X5 172 aa10.22□□□□□ -0.77
BEST1-203ENST00000524877 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
BEST1-203ENST00000524877 STAB1Q9NY15 2570 aa10.21□□□□□ -0.77
BEST1-203ENST00000524877 XIRP2A4UGR9 3374 aa10.2□□□□□ -0.78
BEST1-203ENST00000524877 ZCCHC13Q8WW36 166 aaKnown RBP10.2□□□□□ -0.78
BEST1-203ENST00000524877 SPTBN5Q9NRC6 3674 aaKnown RBP10.18□□□□□ -0.78
BEST1-203ENST00000524877 ITPR2Q14571 2701 aa10.18□□□□□ -0.78
BEST1-203ENST00000524877 TRIOO75962 3097 aa10.18□□□□□ -0.78
BEST1-203ENST00000524877 ROMO1P60602 79 aa10.17□□□□□ -0.78
BEST1-203ENST00000524877 A0A0C4DFX4 3053 aa10.16□□□□□ -0.78
BEST1-203ENST00000524877 COL6A3P12111 3177 aa10.16□□□□□ -0.78
BEST1-203ENST00000524877 KMT2BQ9UMN6 2715 aaPredicted RBP10.16□□□□□ -0.78
BEST1-203ENST00000524877 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
BEST1-203ENST00000524877 NDUFAF8A1L188 74 aa10.12□□□□□ -0.79
BEST1-203ENST00000524877 KRTAP25-1Q3LHN0 102 aa10.11□□□□□ -0.79
BEST1-203ENST00000524877 CFAP54Q96N23 3096 aa10.11□□□□□ -0.79
BEST1-203ENST00000524877 EYSQ5T1H1 3165 aa10.05□□□□□ -0.8
BEST1-203ENST00000524877 MMP24-AS1A0A0U1RRL7 71 aa10.05□□□□□ -0.8
BEST1-203ENST00000524877 HIVEP1P15822 2718 aa10.05□□□□□ -0.8
BEST1-203ENST00000524877 S4R3F8 94 aa10.04□□□□□ -0.8
BEST1-203ENST00000524877 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
BEST1-203ENST00000524877 A0A087X002 238 aa10.01□□□□□ -0.81
BEST1-203ENST00000524877 SPATA8Q6RVD6 105 aa10.01□□□□□ -0.81
BEST1-203ENST00000524877 ADM2Q7Z4H4 148 aa10.01□□□□□ -0.81
BEST1-203ENST00000524877 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
BEST1-203ENST00000524877 FLNCQ14315 2725 aa10□□□□□ -0.81
BEST1-203ENST00000524877 UBR5O95071 2799 aaPredicted RBP9.99□□□□□ -0.81
BEST1-203ENST00000524877 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
BEST1-203ENST00000524877 FRYQ5TBA9 3013 aa9.98□□□□□ -0.81
BEST1-203ENST00000524877 VPS13AQ96RL7 3174 aa9.97□□□□□ -0.81
BEST1-203ENST00000524877 UTP20O75691 2785 aaKnown RBP9.97□□□□□ -0.81
BEST1-203ENST00000524877 RPL37P61927 97 aaKnown RBP9.95□□□□□ -0.82
BEST1-203ENST00000524877 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
BEST1-203ENST00000524877 NOTCH1P46531 2555 aa9.95□□□□□ -0.82
BEST1-203ENST00000524877 FRYLO94915 3013 aa9.92□□□□□ -0.82
BEST1-203ENST00000524877 APCP25054 2843 aa9.91□□□□□ -0.82
BEST1-203ENST00000524877 ITPR1Q14643 2758 aa9.91□□□□□ -0.82
BEST1-203ENST00000524877 ATMQ13315 3056 aa9.91□□□□□ -0.82
BEST1-203ENST00000524877 LAMA1P25391 3075 aa9.91□□□□□ -0.82
BEST1-203ENST00000524877 Q5W150 140 aa9.91□□□□□ -0.82
BEST1-203ENST00000524877 KRTAP11-1Q8IUC1 163 aa9.88□□□□□ -0.83
BEST1-203ENST00000524877 A8MU10 97 aa9.88□□□□□ -0.83
BEST1-203ENST00000524877 NSD1Q96L73 2696 aaPredicted RBP9.87□□□□□ -0.83
BEST1-203ENST00000524877 COL12A1Q99715 3063 aa9.85□□□□□ -0.83
BEST1-203ENST00000524877 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
BEST1-203ENST00000524877 MAP1AP78559 2803 aaPredicted RBP9.84□□□□□ -0.83
BEST1-203ENST00000524877 VCANP13611 3396 aa9.82□□□□□ -0.84
BEST1-203ENST00000524877 DMXL1Q9Y485 3027 aa9.81□□□□□ -0.84
BEST1-203ENST00000524877 USP34Q70CQ2 3546 aa9.8□□□□□ -0.84
BEST1-203ENST00000524877 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
BEST1-203ENST00000524877 TENM4Q6N022 2769 aa9.78□□□□□ -0.84
BEST1-203ENST00000524877 DNAH14Q0VDD8 3507 aa9.78□□□□□ -0.84
BEST1-203ENST00000524877 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
BEST1-203ENST00000524877 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
BEST1-203ENST00000524877 CELSR3Q9NYQ7 3312 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms