RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653		Q6ZR54	194 aa		6.35	□□□□□ -1.39
TCF7-223	ENST00000522653	SPRR1B	P22528	89 aa		6.33	□□□□□ -1.4
TCF7-223	ENST00000522653		Q8N1X5	172 aa		6.33	□□□□□ -1.4
TCF7-223	ENST00000522653		R4GN34	69 aa		6.33	□□□□□ -1.4
TCF7-223	ENST00000522653	LUZP6	Q538Z0	58 aa		6.32	□□□□□ -1.4
TCF7-223	ENST00000522653		Q8NDZ9	215 aa		6.32	□□□□□ -1.4
TCF7-223	ENST00000522653	SPINK7	P58062	85 aa		6.31	□□□□□ -1.4
TCF7-223	ENST00000522653	LAMA3	Q16787	3333 aa		6.31	□□□□□ -1.4
TCF7-223	ENST00000522653	HELZ2	Q9BYK8	2649 aa	Known RBP	6.3	□□□□□ -1.4
TCF7-223	ENST00000522653	ASB16-AS1	Q495Z4	193 aa		6.29	□□□□□ -1.4
TCF7-223	ENST00000522653	DMAC1	Q96GE9	116 aa		6.29	□□□□□ -1.4
TCF7-223	ENST00000522653	MMP24-AS1	A0A0U1RRL7	71 aa		6.28	□□□□□ -1.4
TCF7-223	ENST00000522653	CR1	P17927	2039 aa		6.28	□□□□□ -1.4
TCF7-223	ENST00000522653		A0A0D9SG42	100 aa		6.26	□□□□□ -1.41
TCF7-223	ENST00000522653	TRANK1	O15050	2925 aa		6.25	□□□□□ -1.41
TCF7-223	ENST00000522653	SPRR1A	P35321	89 aa		6.24	□□□□□ -1.41
TCF7-223	ENST00000522653	KRTAP10-2	P60368	255 aa		6.24	□□□□□ -1.41
TCF7-223	ENST00000522653	PRRC2C	Q9Y520	2896 aa	Known RBP	6.23	□□□□□ -1.41
TCF7-223	ENST00000522653		A0A1B0GU33	70 aa		6.23	□□□□□ -1.41
TCF7-223	ENST00000522653	FLNA	P21333	2647 aa	Known RBP	6.23	□□□□□ -1.41
TCF7-223	ENST00000522653		A6NN06	94 aa		6.22	□□□□□ -1.41
TCF7-223	ENST00000522653		A0A0C4DFX4	3053 aa		6.21	□□□□□ -1.42
TCF7-223	ENST00000522653	ITPR3	Q14573	2671 aa		6.2	□□□□□ -1.42
TCF7-223	ENST00000522653	LINC00472	Q9H8W2	130 aa		6.2	□□□□□ -1.42
TCF7-223	ENST00000522653	ZNF292	O60281	2723 aa		6.2	□□□□□ -1.42
TCF7-223	ENST00000522653	USP24	Q9UPU5	2620 aa		6.18	□□□□□ -1.42
TCF7-223	ENST00000522653	CFAP46	Q8IYW2	2715 aa		6.15	□□□□□ -1.43
TCF7-223	ENST00000522653	CDH23	Q9H251	3354 aa		6.14	□□□□□ -1.43
TCF7-223	ENST00000522653	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.13	□□□□□ -1.43
TCF7-223	ENST00000522653	PRUNE2	Q8WUY3	3088 aa		6.13	□□□□□ -1.43
TCF7-223	ENST00000522653	KRTAP1-5	Q9BYS1	174 aa		6.12	□□□□□ -1.43
TCF7-223	ENST00000522653	LAMA2	P24043	3122 aa	Known RBP	6.12	□□□□□ -1.43
TCF7-223	ENST00000522653		M0QZ58	72 aa		6.12	□□□□□ -1.43
TCF7-223	ENST00000522653	MGAM2	Q2M2H8	2515 aa		6.11	□□□□□ -1.43
TCF7-223	ENST00000522653	H1FX-AS1	Q4G0G2	97 aa		6.11	□□□□□ -1.43
TCF7-223	ENST00000522653	UNC80	Q8N2C7	3258 aa		6.11	□□□□□ -1.43
TCF7-223	ENST00000522653		Q5W150	140 aa		6.08	□□□□□ -1.44
TCF7-223	ENST00000522653	SPATA8	Q6RVD6	105 aa		6.08	□□□□□ -1.44
TCF7-223	ENST00000522653	KRTAP26-1	Q6PEX3	210 aa		6.07	□□□□□ -1.44
TCF7-223	ENST00000522653	ATR	Q13535	2644 aa		6.05	□□□□□ -1.44
TCF7-223	ENST00000522653	MAST4	O15021	2626 aa		6.05	□□□□□ -1.44
TCF7-223	ENST00000522653	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.04	□□□□□ -1.44
TCF7-223	ENST00000522653	SZT2	Q5T011	3432 aa		6.04	□□□□□ -1.44
TCF7-223	ENST00000522653		A8MU10	97 aa		6.04	□□□□□ -1.44
TCF7-223	ENST00000522653	RPL37	P61927	97 aa	Known RBP	6.02	□□□□□ -1.45
TCF7-223	ENST00000522653		A0A087X002	238 aa		6.01	□□□□□ -1.45
TCF7-223	ENST00000522653		A0A0A0MQY5	61 aa		6	□□□□□ -1.45
TCF7-223	ENST00000522653	C20orf166-AS1	Q96NR2	134 aa		6	□□□□□ -1.45
TCF7-223	ENST00000522653	ROMO1	P60602	79 aa		5.99	□□□□□ -1.45
TCF7-223	ENST00000522653	IGSF10	Q6WRI0	2623 aa		5.99	□□□□□ -1.45
TCF7-223	ENST00000522653	AKAP13	Q12802	2813 aa		5.99	□□□□□ -1.45
TCF7-223	ENST00000522653	BAHCC1	Q9P281	2608 aa		5.98	□□□□□ -1.45
TCF7-223	ENST00000522653		Q6ZRN7	208 aa	Predicted RBP	5.98	□□□□□ -1.45
TCF7-223	ENST00000522653	XIRP2	A4UGR9	3374 aa		5.97	□□□□□ -1.45
TCF7-223	ENST00000522653	UNC79	Q9P2D8	2635 aa		5.97	□□□□□ -1.45
TCF7-223	ENST00000522653	KRTAP25-1	Q3LHN0	102 aa		5.96	□□□□□ -1.46
TCF7-223	ENST00000522653	ADM2	Q7Z4H4	148 aa		5.96	□□□□□ -1.46
TCF7-223	ENST00000522653	TRIO	O75962	3097 aa		5.95	□□□□□ -1.46
TCF7-223	ENST00000522653	MGA	Q8IWI9	3026 aa		5.95	□□□□□ -1.46
TCF7-223	ENST00000522653	PANO1	I0J062	215 aa		5.94	□□□□□ -1.46
TCF7-223	ENST00000522653	TNRC18	O15417	2968 aa	Predicted RBP	5.93	□□□□□ -1.46
TCF7-223	ENST00000522653	KRTAP16-1	A8MUX0	517 aa		5.93	□□□□□ -1.46
TCF7-223	ENST00000522653	CENPE	Q02224	2701 aa		5.93	□□□□□ -1.46
TCF7-223	ENST00000522653	STAB1	Q9NY15	2570 aa		5.91	□□□□□ -1.46
TCF7-223	ENST00000522653	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.88	□□□□□ -1.47
TCF7-223	ENST00000522653	TEP1	Q99973	2627 aa	Known RBP	5.88	□□□□□ -1.47
TCF7-223	ENST00000522653	CFAP54	Q96N23	3096 aa		5.87	□□□□□ -1.47
TCF7-223	ENST00000522653	PRO2289	Q9P1D8	64 aa		5.87	□□□□□ -1.47
TCF7-223	ENST00000522653	WDFY4	Q6ZS81	3184 aa		5.87	□□□□□ -1.47
TCF7-223	ENST00000522653		A8MUU9	505 aa		5.86	□□□□□ -1.47
TCF7-223	ENST00000522653	DSP	P15924	2871 aa	Known RBP	5.86	□□□□□ -1.47
TCF7-223	ENST00000522653	TPRXL	Q17RH7	258 aa		5.85	□□□□□ -1.47
TCF7-223	ENST00000522653	COL6A3	P12111	3177 aa		5.85	□□□□□ -1.47
TCF7-223	ENST00000522653	COL6A5	A8TX70	2615 aa		5.83	□□□□□ -1.48
TCF7-223	ENST00000522653	NOTCH2NL	Q7Z3S9	236 aa		5.82	□□□□□ -1.48
TCF7-223	ENST00000522653	DNAH14	Q0VDD8	3507 aa		5.81	□□□□□ -1.48
TCF7-223	ENST00000522653	TEX15	Q9BXT5	2789 aa		5.81	□□□□□ -1.48
TCF7-223	ENST00000522653	LAMA1	P25391	3075 aa		5.8	□□□□□ -1.48
TCF7-223	ENST00000522653	VCAN	P13611	3396 aa		5.79	□□□□□ -1.48
TCF7-223	ENST00000522653	TNP1	P09430	55 aa		5.79	□□□□□ -1.48
TCF7-223	ENST00000522653	CHD6	Q8TD26	2715 aa		5.79	□□□□□ -1.48
TCF7-223	ENST00000522653	EYS	Q5T1H1	3165 aa		5.78	□□□□□ -1.48
TCF7-223	ENST00000522653	NDUFAF8	A1L188	74 aa		5.77	□□□□□ -1.49
TCF7-223	ENST00000522653	SETX	Q7Z333	2677 aa	Known RBP	5.77	□□□□□ -1.49
TCF7-223	ENST00000522653	REV3L	O60673	3130 aa		5.76	□□□□□ -1.49
TCF7-223	ENST00000522653	VPS13A	Q96RL7	3174 aa		5.75	□□□□□ -1.49
TCF7-223	ENST00000522653	GCN1	Q92616	2671 aa	Known RBP	5.75	□□□□□ -1.49
TCF7-223	ENST00000522653	KRTAP7-1	Q8IUC3	87 aa		5.75	□□□□□ -1.49
TCF7-223	ENST00000522653	KRTAP13-2	Q52LG2	175 aa		5.73	□□□□□ -1.49
TCF7-223	ENST00000522653	KRTAP13-1	Q8IUC0	172 aa		5.7	□□□□□ -1.5
TCF7-223	ENST00000522653	ITPR2	Q14571	2701 aa		5.69	□□□□□ -1.5
TCF7-223	ENST00000522653	KRTAP11-1	Q8IUC1	163 aa		5.68	□□□□□ -1.5
TCF7-223	ENST00000522653	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF7-223	ENST00000522653	CELSR3	Q9NYQ7	3312 aa		5.68	□□□□□ -1.5
TCF7-223	ENST00000522653	KRTAP10-10	P60014	251 aa		5.66	□□□□□ -1.5
TCF7-223	ENST00000522653	NOTCH1	P46531	2555 aa		5.65	□□□□□ -1.5
TCF7-223	ENST00000522653	XP32	Q5T750	250 aa		5.64	□□□□□ -1.51
TCF7-223	ENST00000522653	FLNC	Q14315	2725 aa		5.63	□□□□□ -1.51
TCF7-223	ENST00000522653	FRY	Q5TBA9	3013 aa		5.62	□□□□□ -1.51
TCF7-223	ENST00000522653	PP632	Q6XCG6	107 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms