RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 Q6ZVH6 145 aa10.43□□□□□ -0.74
HDAC2-207ENST00000520170 TRAV13-2A0A0B4J235 113 aa10.42□□□□□ -0.74
HDAC2-207ENST00000520170 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
HDAC2-207ENST00000520170 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
HDAC2-207ENST00000520170 VAMP3Q15836 100 aa10.38□□□□□ -0.75
HDAC2-207ENST00000520170 Q75L30 129 aa10.38□□□□□ -0.75
HDAC2-207ENST00000520170 ATOH7Q8N100 152 aa10.38□□□□□ -0.75
HDAC2-207ENST00000520170 Q6JHZ5 121 aa10.37□□□□□ -0.75
HDAC2-207ENST00000520170 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
HDAC2-207ENST00000520170 LINC00575Q6W349 94 aa10.37□□□□□ -0.75
HDAC2-207ENST00000520170 C20orf202A1L168 122 aa10.36□□□□□ -0.75
HDAC2-207ENST00000520170 Q6ZQY7 126 aa10.36□□□□□ -0.75
HDAC2-207ENST00000520170 CLEC2BQ92478 149 aa10.36□□□□□ -0.75
HDAC2-207ENST00000520170 hADV29S1A0JD25 119 aa10.33□□□□□ -0.76
HDAC2-207ENST00000520170 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
HDAC2-207ENST00000520170 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
HDAC2-207ENST00000520170 Q96NJ1 140 aa10.31□□□□□ -0.76
HDAC2-207ENST00000520170 KRTAP9-7A8MTY7 169 aa10.3□□□□□ -0.76
HDAC2-207ENST00000520170 CFC1P0CG37 223 aa10.28□□□□□ -0.76
HDAC2-207ENST00000520170 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
HDAC2-207ENST00000520170 LST1O00453 97 aa10.27□□□□□ -0.77
HDAC2-207ENST00000520170 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
HDAC2-207ENST00000520170 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
HDAC2-207ENST00000520170 H3BUT2 72 aa10.23□□□□□ -0.77
HDAC2-207ENST00000520170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.23□□□□□ -0.77
HDAC2-207ENST00000520170 TRBV20-1A0A075B6N2 111 aa10.21□□□□□ -0.77
HDAC2-207ENST00000520170 SNRPEP62304 92 aaKnown RBP10.2□□□□□ -0.78
HDAC2-207ENST00000520170 C20orf166-AS1Q96NR2 134 aa10.2□□□□□ -0.78
HDAC2-207ENST00000520170 USH2AO75445 5202 aa10.19□□□□□ -0.78
HDAC2-207ENST00000520170 SSPOA2VEC9 5147 aa10.19□□□□□ -0.78
HDAC2-207ENST00000520170 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
HDAC2-207ENST00000520170 A8MUU9 505 aa10.17□□□□□ -0.78
HDAC2-207ENST00000520170 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
HDAC2-207ENST00000520170 C12orf57Q99622 126 aa10.16□□□□□ -0.78
HDAC2-207ENST00000520170 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
HDAC2-207ENST00000520170 BVES-AS1Q5T3Y7 98 aa10.15□□□□□ -0.78
HDAC2-207ENST00000520170 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
HDAC2-207ENST00000520170 TEN1Q86WV5 123 aa10.1□□□□□ -0.79
HDAC2-207ENST00000520170 MT2AP02795 61 aa10.09□□□□□ -0.79
HDAC2-207ENST00000520170 DSCR10P59022 87 aa10.09□□□□□ -0.79
HDAC2-207ENST00000520170 A0A087WSZ3 146 aa10.08□□□□□ -0.8
HDAC2-207ENST00000520170 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
HDAC2-207ENST00000520170 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
HDAC2-207ENST00000520170 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
HDAC2-207ENST00000520170 NDUFV3P56181 108 aaKnown RBP10.06□□□□□ -0.8
HDAC2-207ENST00000520170 FCGBPQ9Y6R7 5405 aaPredicted RBP10.04□□□□□ -0.8
HDAC2-207ENST00000520170 KRTAP16-1A8MUX0 517 aa10.03□□□□□ -0.8
HDAC2-207ENST00000520170 SNCGO76070 127 aa10.03□□□□□ -0.8
HDAC2-207ENST00000520170 SIGMAR1Q99720 223 aa10.02□□□□□ -0.81
HDAC2-207ENST00000520170 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
HDAC2-207ENST00000520170 LCE2BO14633 110 aa10.01□□□□□ -0.81
HDAC2-207ENST00000520170 MT1FP04733 61 aa10.01□□□□□ -0.81
HDAC2-207ENST00000520170 KRTAP19-1Q8IUB9 90 aa10.01□□□□□ -0.81
HDAC2-207ENST00000520170 HIST3H2BBQ8N257 126 aa10.01□□□□□ -0.81
HDAC2-207ENST00000520170 S100A2P29034 98 aa10□□□□□ -0.81
HDAC2-207ENST00000520170 FAM218AQ96MZ4 157 aa10□□□□□ -0.81
HDAC2-207ENST00000520170 H3BMG7 143 aa9.99□□□□□ -0.81
HDAC2-207ENST00000520170 LINC00313P59037 77 aa9.99□□□□□ -0.81
HDAC2-207ENST00000520170 H0YGX0 51 aa9.98□□□□□ -0.81
HDAC2-207ENST00000520170 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
HDAC2-207ENST00000520170 RAB37Q96AX2 223 aa9.97□□□□□ -0.81
HDAC2-207ENST00000520170 RBM12B-AS1Q9P1G2 102 aa9.97□□□□□ -0.81
HDAC2-207ENST00000520170 KRTAP9-3Q9BYQ3 159 aa9.96□□□□□ -0.82
HDAC2-207ENST00000520170 FABP2P12104 132 aa9.95□□□□□ -0.82
HDAC2-207ENST00000520170 A0A1W2PNM2 257 aa9.94□□□□□ -0.82
HDAC2-207ENST00000520170 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
HDAC2-207ENST00000520170 COX8AP10176 69 aa9.93□□□□□ -0.82
HDAC2-207ENST00000520170 HRES1P13985 223 aa9.93□□□□□ -0.82
HDAC2-207ENST00000520170 MPLKIPQ8TAP9 179 aa9.93□□□□□ -0.82
HDAC2-207ENST00000520170 NOTCH2NLQ7Z3S9 236 aa9.91□□□□□ -0.82
HDAC2-207ENST00000520170 GHRHP01286 108 aa9.89□□□□□ -0.83
HDAC2-207ENST00000520170 A0A0B4J2C4 111 aa9.88□□□□□ -0.83
HDAC2-207ENST00000520170 DLEU1O43261 78 aa9.87□□□□□ -0.83
HDAC2-207ENST00000520170 DEFB116Q30KQ4 102 aa9.87□□□□□ -0.83
HDAC2-207ENST00000520170 A0A1B0GV72 72 aa9.85□□□□□ -0.83
HDAC2-207ENST00000520170 A0A1B0GX51 115 aa9.85□□□□□ -0.83
HDAC2-207ENST00000520170 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
HDAC2-207ENST00000520170 C14orf144Q96I85 54 aa9.85□□□□□ -0.83
HDAC2-207ENST00000520170 IGHV6-1A0A0B4J1U7 121 aa9.83□□□□□ -0.84
HDAC2-207ENST00000520170 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
HDAC2-207ENST00000520170 S100A6P06703 90 aa9.83□□□□□ -0.84
HDAC2-207ENST00000520170 HIGD1BQ9P298 99 aa9.81□□□□□ -0.84
HDAC2-207ENST00000520170 LINC00472Q9H8W2 130 aa9.8□□□□□ -0.84
HDAC2-207ENST00000520170 PRO1854Q9UHT4 67 aa9.8□□□□□ -0.84
HDAC2-207ENST00000520170 MTURNQ8N3F0 131 aa9.78□□□□□ -0.84
HDAC2-207ENST00000520170 MACF1Q9UPN3 7388 aaKnown RBP9.78□□□□□ -0.84
HDAC2-207ENST00000520170 TRIAP1O43715 76 aa9.77□□□□□ -0.85
HDAC2-207ENST00000520170 C2orf91Q6ZV80 131 aa9.76□□□□□ -0.85
HDAC2-207ENST00000520170 CEND1Q8N111 149 aa9.76□□□□□ -0.85
HDAC2-207ENST00000520170 LINC00846Q9NV44 126 aa9.76□□□□□ -0.85
HDAC2-207ENST00000520170 DNAL4O96015 105 aa9.75□□□□□ -0.85
HDAC2-207ENST00000520170 TRACP01848 142 aa9.75□□□□□ -0.85
HDAC2-207ENST00000520170 CCKP06307 115 aa9.75□□□□□ -0.85
HDAC2-207ENST00000520170 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
HDAC2-207ENST00000520170 PAM16Q9Y3D7 125 aa9.75□□□□□ -0.85
HDAC2-207ENST00000520170 SPATA45Q537H7 98 aa9.74□□□□□ -0.85
HDAC2-207ENST00000520170 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
HDAC2-207ENST00000520170 A6NJY4 79 aa9.73□□□□□ -0.85
HDAC2-207ENST00000520170 KRTAP19-6Q3LI70 58 aa9.71□□□□□ -0.86
HDAC2-207ENST00000520170 SYNE2Q8WXH0 6885 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms