RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
FAM49B-214ENST00000519540 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
FAM49B-214ENST00000519540 A0A1B0GW54 56 aa11.31□□□□□ -0.6
FAM49B-214ENST00000519540 Q8NBF4 154 aa11.31□□□□□ -0.6
FAM49B-214ENST00000519540 HYDINQ4G0P3 5121 aa11.31□□□□□ -0.6
FAM49B-214ENST00000519540 FAM30AQ9NZY2 134 aa11.3□□□□□ -0.6
FAM49B-214ENST00000519540 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
FAM49B-214ENST00000519540 HIST1H4AP62805 103 aaKnown RBP11.29□□□□□ -0.6
FAM49B-214ENST00000519540 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
FAM49B-214ENST00000519540 A0A087WVE0 104 aa11.28□□□□□ -0.6
FAM49B-214ENST00000519540 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
FAM49B-214ENST00000519540 CXCL6P80162 114 aa11.28□□□□□ -0.6
FAM49B-214ENST00000519540 NREPQ16612 68 aa11.27□□□□□ -0.61
FAM49B-214ENST00000519540 A0A0G2JQZ4 141 aa11.26□□□□□ -0.61
FAM49B-214ENST00000519540 CIRBP-AS1Q8TBR5 109 aa11.26□□□□□ -0.61
FAM49B-214ENST00000519540 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
FAM49B-214ENST00000519540 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
FAM49B-214ENST00000519540 CRYGAP11844 174 aa11.25□□□□□ -0.61
FAM49B-214ENST00000519540 Q6ZSA8 131 aa11.25□□□□□ -0.61
FAM49B-214ENST00000519540 ZNF861PO60384 105 aa11.24□□□□□ -0.61
FAM49B-214ENST00000519540 LCE6AA0A183 80 aa11.22□□□□□ -0.61
FAM49B-214ENST00000519540 SCXQ7RTU7 201 aa11.22□□□□□ -0.61
FAM49B-214ENST00000519540 DNAH8Q96JB1 4490 aa11.22□□□□□ -0.61
FAM49B-214ENST00000519540 FAT2Q9NYQ8 4349 aa11.21□□□□□ -0.62
FAM49B-214ENST00000519540 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.62
FAM49B-214ENST00000519540 LINC00483Q53H64 154 aa11.2□□□□□ -0.62
FAM49B-214ENST00000519540 PKD1P98161 4303 aa11.2□□□□□ -0.62
FAM49B-214ENST00000519540 ZNF706Q9Y5V0 76 aaPredicted RBP11.19□□□□□ -0.62
FAM49B-214ENST00000519540 IGLV7-43P04211 117 aa11.19□□□□□ -0.62
FAM49B-214ENST00000519540 BPY2O14599 106 aa11.16□□□□□ -0.62
FAM49B-214ENST00000519540 ATOX1O00244 68 aa11.16□□□□□ -0.62
FAM49B-214ENST00000519540 A0A087WSZ3 146 aa11.13□□□□□ -0.63
FAM49B-214ENST00000519540 IGLV9-49A0A0B4J1Y8 123 aa11.13□□□□□ -0.63
FAM49B-214ENST00000519540 SACSQ9NZJ4 4579 aa11.12□□□□□ -0.63
FAM49B-214ENST00000519540 LINC00336Q6ZUF6 198 aa11.12□□□□□ -0.63
FAM49B-214ENST00000519540 Q8N9L7 120 aa11.11□□□□□ -0.63
FAM49B-214ENST00000519540 CCDC179H3BU77 68 aa11.11□□□□□ -0.63
FAM49B-214ENST00000519540 IGKV4-1P06312 121 aa11.09□□□□□ -0.63
FAM49B-214ENST00000519540 C9orf153Q5TBE3 101 aa11.09□□□□□ -0.63
FAM49B-214ENST00000519540 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
FAM49B-214ENST00000519540 RPL37AP61513 92 aaKnown RBP11.08□□□□□ -0.64
FAM49B-214ENST00000519540 DSCR10P59022 87 aa11.05□□□□□ -0.64
FAM49B-214ENST00000519540 COX7CP15954 63 aa11.04□□□□□ -0.64
FAM49B-214ENST00000519540 MOBPQ13875 183 aa11.04□□□□□ -0.64
FAM49B-214ENST00000519540 SERP2Q8N6R1 65 aa11.04□□□□□ -0.64
FAM49B-214ENST00000519540 UQCRQO14949 82 aa11.02□□□□□ -0.64
FAM49B-214ENST00000519540 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
FAM49B-214ENST00000519540 DEFB116Q30KQ4 102 aa11.01□□□□□ -0.65
FAM49B-214ENST00000519540 LRP1BQ9NZR2 4599 aa10.98□□□□□ -0.65
FAM49B-214ENST00000519540 K7EQZ3 153 aa10.98□□□□□ -0.65
FAM49B-214ENST00000519540 LINC00472Q9H8W2 130 aa10.98□□□□□ -0.65
FAM49B-214ENST00000519540 HRCT1Q6UXD1 115 aa10.96□□□□□ -0.65
FAM49B-214ENST00000519540 SMIM20Q8N5G0 67 aa10.95□□□□□ -0.66
FAM49B-214ENST00000519540 TRAV7A0A075B6U4 112 aa10.94□□□□□ -0.66
FAM49B-214ENST00000519540 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
FAM49B-214ENST00000519540 RYR2Q92736 4967 aa10.92□□□□□ -0.66
FAM49B-214ENST00000519540 SSBP3-AS1Q7Z2R9 100 aa10.91□□□□□ -0.66
FAM49B-214ENST00000519540 SS18L2Q9UHA2 77 aa10.89□□□□□ -0.67
FAM49B-214ENST00000519540 Q96NJ1 140 aa10.89□□□□□ -0.67
FAM49B-214ENST00000519540 A0A087X002 238 aa10.88□□□□□ -0.67
FAM49B-214ENST00000519540 J3KT08 172 aa10.87□□□□□ -0.67
FAM49B-214ENST00000519540 FAM229BQ4G0N7 80 aa10.87□□□□□ -0.67
FAM49B-214ENST00000519540 A8MWP4 228 aa10.87□□□□□ -0.67
FAM49B-214ENST00000519540 HCG22E2RYF7 251 aa10.86□□□□□ -0.67
FAM49B-214ENST00000519540 PRR15Q8IV56 129 aa10.86□□□□□ -0.67
FAM49B-214ENST00000519540 KRTAP1-4P0C5Y4 121 aa10.85□□□□□ -0.67
FAM49B-214ENST00000519540 KRTAP13-2Q52LG2 175 aa10.85□□□□□ -0.67
FAM49B-214ENST00000519540 CD164Q04900 197 aa10.85□□□□□ -0.67
FAM49B-214ENST00000519540 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
FAM49B-214ENST00000519540 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
FAM49B-214ENST00000519540 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
FAM49B-214ENST00000519540 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
FAM49B-214ENST00000519540 SMR3BP02814 79 aaPredicted RBP10.82□□□□□ -0.68
FAM49B-214ENST00000519540 CYSTM1Q9H1C7 97 aa10.82□□□□□ -0.68
FAM49B-214ENST00000519540 C20orf197Q8N268 126 aa10.8□□□□□ -0.68
FAM49B-214ENST00000519540 SPINK6Q6UWN8 80 aa10.8□□□□□ -0.68
FAM49B-214ENST00000519540 NDUFB1O75438 58 aa10.79□□□□□ -0.68
FAM49B-214ENST00000519540 WFDC13Q8IUB5 93 aa10.79□□□□□ -0.68
FAM49B-214ENST00000519540 KRTAP29-1A8MX34 341 aaPredicted RBP10.78□□□□□ -0.68
FAM49B-214ENST00000519540 PLA2G1BP04054 148 aaKnown RBP10.77□□□□□ -0.68
FAM49B-214ENST00000519540 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
FAM49B-214ENST00000519540 KLKP1Q107X0 134 aa10.73□□□□□ -0.69
FAM49B-214ENST00000519540 MMP24-AS1A0A0U1RRL7 71 aa10.72□□□□□ -0.69
FAM49B-214ENST00000519540 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
FAM49B-214ENST00000519540 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
FAM49B-214ENST00000519540 A0A1B0GVX0 72 aa10.7□□□□□ -0.7
FAM49B-214ENST00000519540 TMEM254Q8TBM7 123 aa10.7□□□□□ -0.7
FAM49B-214ENST00000519540 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
FAM49B-214ENST00000519540 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
FAM49B-214ENST00000519540 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
FAM49B-214ENST00000519540 Q5XG85 94 aa10.68□□□□□ -0.7
FAM49B-214ENST00000519540 TYMSOSQ8TAI1 123 aa10.68□□□□□ -0.7
FAM49B-214ENST00000519540 IGHV6-1A0A0B4J1U7 121 aa10.67□□□□□ -0.7
FAM49B-214ENST00000519540 C8orf17Q9NRJ1 99 aa10.67□□□□□ -0.7
FAM49B-214ENST00000519540 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
FAM49B-214ENST00000519540 A0A0U1RQV1 116 aa10.65□□□□□ -0.7
FAM49B-214ENST00000519540 TMEM258P61165 79 aa10.63□□□□□ -0.71
FAM49B-214ENST00000519540 PRR26Q8N8Z3 221 aa10.63□□□□□ -0.71
FAM49B-214ENST00000519540 H7BZZ5 65 aa10.63□□□□□ -0.71
FAM49B-214ENST00000519540 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms