RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 HCG22E2RYF7 251 aa10.4□□□□□ -0.74
PCDHGA11-202ENST00000518882 C16orf90A8MZG2 172 aa10.39□□□□□ -0.75
PCDHGA11-202ENST00000518882 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.38□□□□□ -0.75
PCDHGA11-202ENST00000518882 COL7A1Q02388 2944 aa10.38□□□□□ -0.75
PCDHGA11-202ENST00000518882 A0A087WSZ3 146 aa10.38□□□□□ -0.75
PCDHGA11-202ENST00000518882 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
PCDHGA11-202ENST00000518882 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
PCDHGA11-202ENST00000518882 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
PCDHGA11-202ENST00000518882 CSMD3Q7Z407 3707 aa10.37□□□□□ -0.75
PCDHGA11-202ENST00000518882 IGLV8-61A0A075B6I0 122 aa10.36□□□□□ -0.75
PCDHGA11-202ENST00000518882 K7EIL1 84 aa10.36□□□□□ -0.75
PCDHGA11-202ENST00000518882 CNBPP62633 177 aaKnown RBP10.35□□□□□ -0.75
PCDHGA11-202ENST00000518882 hDV103S1A0JD37 113 aa10.34□□□□□ -0.75
PCDHGA11-202ENST00000518882 RPL37AP61513 92 aaKnown RBP10.34□□□□□ -0.75
PCDHGA11-202ENST00000518882 WFDC13Q8IUB5 93 aa10.34□□□□□ -0.75
PCDHGA11-202ENST00000518882 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
PCDHGA11-202ENST00000518882 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
PCDHGA11-202ENST00000518882 UBE2AP49459 152 aa10.32□□□□□ -0.76
PCDHGA11-202ENST00000518882 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
PCDHGA11-202ENST00000518882 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
PCDHGA11-202ENST00000518882 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
PCDHGA11-202ENST00000518882 DNAH7Q8WXX0 4024 aa10.31□□□□□ -0.76
PCDHGA11-202ENST00000518882 PRR4Q16378 134 aa10.28□□□□□ -0.76
PCDHGA11-202ENST00000518882 MGAM2Q2M2H8 2515 aa10.28□□□□□ -0.76
PCDHGA11-202ENST00000518882 BRK1Q8WUW1 75 aa10.28□□□□□ -0.76
PCDHGA11-202ENST00000518882 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
PCDHGA11-202ENST00000518882 SPRR1BP22528 89 aa10.24□□□□□ -0.77
PCDHGA11-202ENST00000518882 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
PCDHGA11-202ENST00000518882 H0Y9J4 135 aa10.22□□□□□ -0.77
PCDHGA11-202ENST00000518882 PRR15Q8IV56 129 aa10.22□□□□□ -0.77
PCDHGA11-202ENST00000518882 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
PCDHGA11-202ENST00000518882 LINC00208Q96KT6 92 aa10.21□□□□□ -0.77
PCDHGA11-202ENST00000518882 LINC00472Q9H8W2 130 aa10.21□□□□□ -0.77
PCDHGA11-202ENST00000518882 TRAV22A0A0B4J277 110 aa10.21□□□□□ -0.78
PCDHGA11-202ENST00000518882 CASC2Q6XLA1 102 aa10.21□□□□□ -0.78
PCDHGA11-202ENST00000518882 MP68P56378 58 aa10.2□□□□□ -0.78
PCDHGA11-202ENST00000518882 APLNQ9ULZ1 77 aa10.2□□□□□ -0.78
PCDHGA11-202ENST00000518882 PANO1I0J062 215 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 NDUFB1O75438 58 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 Q1T7F1 81 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 A8MWP4 228 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 C14orf177Q52M58 125 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 C9orf163Q8N9P6 203 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 PKIGQ9Y2B9 76 aa10.18□□□□□ -0.78
PCDHGA11-202ENST00000518882 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
PCDHGA11-202ENST00000518882 H0Y9P7 68 aa10.16□□□□□ -0.78
PCDHGA11-202ENST00000518882 B9D2Q9BPU9 175 aa10.14□□□□□ -0.79
PCDHGA11-202ENST00000518882 KRTAP13-1Q8IUC0 172 aa10.13□□□□□ -0.79
PCDHGA11-202ENST00000518882 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
PCDHGA11-202ENST00000518882 PSPHP1O15172 72 aa10.11□□□□□ -0.79
PCDHGA11-202ENST00000518882 MMP24-AS1A0A0U1RRL7 71 aa10.1□□□□□ -0.79
PCDHGA11-202ENST00000518882 H3BPC8 53 aa10.08□□□□□ -0.8
PCDHGA11-202ENST00000518882 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
PCDHGA11-202ENST00000518882 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
PCDHGA11-202ENST00000518882 Q96NJ1 140 aa10.07□□□□□ -0.8
PCDHGA11-202ENST00000518882 IGLV9-49A0A0B4J1Y8 123 aa10.06□□□□□ -0.8
PCDHGA11-202ENST00000518882 NBDYA0A0U1RRE5 68 aa10.06□□□□□ -0.8
PCDHGA11-202ENST00000518882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA11-202ENST00000518882 A8MUN3 132 aa10.02□□□□□ -0.81
PCDHGA11-202ENST00000518882 SPACA4Q8TDM5 124 aa10.02□□□□□ -0.81
PCDHGA11-202ENST00000518882 MDFIQ99750 246 aa10.01□□□□□ -0.81
PCDHGA11-202ENST00000518882 FRAS1Q86XX4 4008 aa10□□□□□ -0.81
PCDHGA11-202ENST00000518882 ASB16-AS1Q495Z4 193 aa9.99□□□□□ -0.81
PCDHGA11-202ENST00000518882 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
PCDHGA11-202ENST00000518882 HECTD4Q9Y4D8 3996 aa9.99□□□□□ -0.81
PCDHGA11-202ENST00000518882 MOBPQ13875 183 aa9.99□□□□□ -0.81
PCDHGA11-202ENST00000518882 LINC00483Q53H64 154 aa9.97□□□□□ -0.81
PCDHGA11-202ENST00000518882 STARD9Q9P2P6 4700 aa9.96□□□□□ -0.81
PCDHGA11-202ENST00000518882 Q5VV11 94 aa9.96□□□□□ -0.82
PCDHGA11-202ENST00000518882 Q8N9P0 234 aaPredicted RBP9.96□□□□□ -0.82
PCDHGA11-202ENST00000518882 V9GYY9 64 aa9.96□□□□□ -0.82
PCDHGA11-202ENST00000518882 DNAH8Q96JB1 4490 aa9.96□□□□□ -0.82
PCDHGA11-202ENST00000518882 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
PCDHGA11-202ENST00000518882 VPS13DQ5THJ4 4388 aa9.95□□□□□ -0.82
PCDHGA11-202ENST00000518882 ANAPC11Q9NYG5 84 aa9.94□□□□□ -0.82
PCDHGA11-202ENST00000518882 PCOTHQ58A44 107 aa9.94□□□□□ -0.82
PCDHGA11-202ENST00000518882 IGLV7-46A0A075B6I9 117 aa9.93□□□□□ -0.82
PCDHGA11-202ENST00000518882 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
PCDHGA11-202ENST00000518882 A8MU10 97 aa9.93□□□□□ -0.82
PCDHGA11-202ENST00000518882 CD164Q04900 197 aa9.92□□□□□ -0.82
PCDHGA11-202ENST00000518882 IGHV6-1A0A0B4J1U7 121 aa9.91□□□□□ -0.82
PCDHGA11-202ENST00000518882 COA5Q86WW8 74 aa9.91□□□□□ -0.82
PCDHGA11-202ENST00000518882 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
PCDHGA11-202ENST00000518882 NUPR2A6NF83 97 aa9.91□□□□□ -0.82
PCDHGA11-202ENST00000518882 A0A087WTM6 91 aa9.9□□□□□ -0.82
PCDHGA11-202ENST00000518882 A0A1B0GVX0 72 aa9.9□□□□□ -0.82
PCDHGA11-202ENST00000518882 TP53AIP1Q9HCN2 124 aa9.9□□□□□ -0.82
PCDHGA11-202ENST00000518882 Q6ZR54 194 aa9.9□□□□□ -0.83
PCDHGA11-202ENST00000518882 KMT2AQ03164 3969 aa9.89□□□□□ -0.83
PCDHGA11-202ENST00000518882 A0A087X002 238 aa9.89□□□□□ -0.83
PCDHGA11-202ENST00000518882 NOTCH2NLQ7Z3S9 236 aa9.89□□□□□ -0.83
PCDHGA11-202ENST00000518882 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
PCDHGA11-202ENST00000518882 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
PCDHGA11-202ENST00000518882 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
PCDHGA11-202ENST00000518882 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
PCDHGA11-202ENST00000518882 NDUFS5O43920 106 aa9.87□□□□□ -0.83
PCDHGA11-202ENST00000518882 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
PCDHGA11-202ENST00000518882 PRR15LQ9BU68 103 aa9.87□□□□□ -0.83
PCDHGA11-202ENST00000518882 ZNF706Q9Y5V0 76 aaPredicted RBP9.86□□□□□ -0.83
PCDHGA11-202ENST00000518882 RTL8CO15255 209 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms