RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.61□□□□□ -0.23
PVT1-204ENST00000517525 A0A0B4J2C4 111 aa13.59□□□□□ -0.23
PVT1-204ENST00000517525 SEC61BP60468 96 aaKnown RBP13.59□□□□□ -0.23
PVT1-204ENST00000517525 PPDPFLQ8WWR9 84 aa13.59□□□□□ -0.23
PVT1-204ENST00000517525 IGLV8-61A0A075B6I0 122 aa13.58□□□□□ -0.24
PVT1-204ENST00000517525 F8WEM9 126 aa13.57□□□□□ -0.24
PVT1-204ENST00000517525 Q6JHZ5 121 aa13.55□□□□□ -0.24
PVT1-204ENST00000517525 RAB37Q96AX2 223 aa13.55□□□□□ -0.24
PVT1-204ENST00000517525 A0A0G2JQZ4 141 aa13.54□□□□□ -0.24
PVT1-204ENST00000517525 CEND1Q8N111 149 aa13.53□□□□□ -0.24
PVT1-204ENST00000517525 H0YGX0 51 aa13.52□□□□□ -0.25
PVT1-204ENST00000517525 C1orf195Q5TG92 126 aa13.52□□□□□ -0.25
PVT1-204ENST00000517525 KRTAP9-2Q9BYQ4 174 aa13.52□□□□□ -0.25
PVT1-204ENST00000517525 OCIAD2Q56VL3 154 aa13.51□□□□□ -0.25
PVT1-204ENST00000517525 PYY3Q5JQD4 70 aa13.51□□□□□ -0.25
PVT1-204ENST00000517525 FAT4Q6V0I7 4981 aa13.51□□□□□ -0.25
PVT1-204ENST00000517525 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
PVT1-204ENST00000517525 A6NJY4 79 aa13.48□□□□□ -0.25
PVT1-204ENST00000517525 TCL1BO95988 128 aa13.48□□□□□ -0.25
PVT1-204ENST00000517525 LCE2AQ5TA79 106 aaPredicted RBP13.48□□□□□ -0.25
PVT1-204ENST00000517525 CLEC2BQ92478 149 aa13.47□□□□□ -0.25
PVT1-204ENST00000517525 SNCGO76070 127 aa13.46□□□□□ -0.25
PVT1-204ENST00000517525 PRO1854Q9UHT4 67 aa13.46□□□□□ -0.25
PVT1-204ENST00000517525 IGFL1Q6UW32 110 aa13.45□□□□□ -0.26
PVT1-204ENST00000517525 SNHG12Q9BXW3 62 aa13.44□□□□□ -0.26
PVT1-204ENST00000517525 A0A1B0GX51 115 aa13.43□□□□□ -0.26
PVT1-204ENST00000517525 FXYD2P54710 66 aa13.43□□□□□ -0.26
PVT1-204ENST00000517525 KRTAP4-1Q9BYQ7 146 aa13.43□□□□□ -0.26
PVT1-204ENST00000517525 TRBV7-7A0A0K0K1E9 115 aa13.41□□□□□ -0.26
PVT1-204ENST00000517525 FAM218AQ96MZ4 157 aa13.41□□□□□ -0.26
PVT1-204ENST00000517525 HSD52Q0P140 79 aa13.39□□□□□ -0.27
PVT1-204ENST00000517525 C9orf92A6NGG3 77 aa13.38□□□□□ -0.27
PVT1-204ENST00000517525 GHRHP01286 108 aa13.36□□□□□ -0.27
PVT1-204ENST00000517525 Q6Q795 121 aa13.33□□□□□ -0.28
PVT1-204ENST00000517525 H3BUT2 72 aa13.32□□□□□ -0.28
PVT1-204ENST00000517525 NDUFV3P56181 108 aaKnown RBP13.32□□□□□ -0.28
PVT1-204ENST00000517525 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
PVT1-204ENST00000517525 TRIAP1O43715 76 aa13.31□□□□□ -0.28
PVT1-204ENST00000517525 UQCR10Q9UDW1 63 aa13.31□□□□□ -0.28
PVT1-204ENST00000517525 PCOTHQ58A44 107 aa13.28□□□□□ -0.28
PVT1-204ENST00000517525 TEN1Q86WV5 123 aa13.25□□□□□ -0.29
PVT1-204ENST00000517525 H3BQ85 93 aa13.23□□□□□ -0.29
PVT1-204ENST00000517525 RPL37P61927 97 aaKnown RBP13.23□□□□□ -0.29
PVT1-204ENST00000517525 KRTAP9-6A0A140TA67 174 aa13.22□□□□□ -0.29
PVT1-204ENST00000517525 H3BMG7 143 aa13.22□□□□□ -0.29
PVT1-204ENST00000517525 SS18L2Q9UHA2 77 aa13.22□□□□□ -0.29
PVT1-204ENST00000517525 K7ERJ3 54 aa13.21□□□□□ -0.29
PVT1-204ENST00000517525 LST1O00453 97 aa13.21□□□□□ -0.29
PVT1-204ENST00000517525 COX6CP09669 75 aa13.2□□□□□ -0.3
PVT1-204ENST00000517525 FABP2P12104 132 aa13.2□□□□□ -0.3
PVT1-204ENST00000517525 PSMB2P49721 201 aa13.18□□□□□ -0.3
PVT1-204ENST00000517525 DNAL4O96015 105 aa13.16□□□□□ -0.3
PVT1-204ENST00000517525 ORMDL1Q9P0S3 153 aa13.16□□□□□ -0.3
PVT1-204ENST00000517525 TMEM256-PLSCR3K7ERE1 68 aa13.13□□□□□ -0.31
PVT1-204ENST00000517525 KRTAP19-2Q3LHN2 52 aa13.13□□□□□ -0.31
PVT1-204ENST00000517525 LCE2CQ5TA81 110 aa13.12□□□□□ -0.31
PVT1-204ENST00000517525 A0A087WSZ3 146 aa13.11□□□□□ -0.31
PVT1-204ENST00000517525 A0A1W2PNM2 257 aa13.1□□□□□ -0.31
PVT1-204ENST00000517525 TRACP01848 142 aa13.09□□□□□ -0.31
PVT1-204ENST00000517525 UBE2V1Q13404 147 aa13.07□□□□□ -0.32
PVT1-204ENST00000517525 Q75L30 129 aa13.07□□□□□ -0.32
PVT1-204ENST00000517525 OBSCN-AS1Q96MR7 158 aa13.07□□□□□ -0.32
PVT1-204ENST00000517525 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
PVT1-204ENST00000517525 ANKRD29Q8N6D5 301 aa13.06□□□□□ -0.32
PVT1-204ENST00000517525 Q96NJ1 140 aa13.06□□□□□ -0.32
PVT1-204ENST00000517525 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
PVT1-204ENST00000517525 SMIM6P0DI80 62 aa12.99□□□□□ -0.33
PVT1-204ENST00000517525 M0R143 59 aa12.97□□□□□ -0.33
PVT1-204ENST00000517525 ATP11AUNQ6ZP68 121 aa12.96□□□□□ -0.33
PVT1-204ENST00000517525 C20orf166-AS1Q96NR2 134 aa12.96□□□□□ -0.33
PVT1-204ENST00000517525 A8MUU9 505 aa12.93□□□□□ -0.34
PVT1-204ENST00000517525 CCKP06307 115 aa12.93□□□□□ -0.34
PVT1-204ENST00000517525 MT1HP80294 61 aa12.92□□□□□ -0.34
PVT1-204ENST00000517525 A0A1B0GV72 72 aa12.9□□□□□ -0.34
PVT1-204ENST00000517525 RBM3P98179 157 aaKnown RBP12.9□□□□□ -0.34
PVT1-204ENST00000517525 LINC00472Q9H8W2 130 aa12.9□□□□□ -0.34
PVT1-204ENST00000517525 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
PVT1-204ENST00000517525 SIGMAR1Q99720 223 aa12.87□□□□□ -0.35
PVT1-204ENST00000517525 IGKV4-1P06312 121 aa12.86□□□□□ -0.35
PVT1-204ENST00000517525 DSCR8Q96T75 97 aa12.85□□□□□ -0.35
PVT1-204ENST00000517525 DSCR10P59022 87 aa12.83□□□□□ -0.36
PVT1-204ENST00000517525 ATXN8Q156A1 80 aa12.83□□□□□ -0.36
PVT1-204ENST00000517525 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
PVT1-204ENST00000517525 LINC00313P59037 77 aa12.82□□□□□ -0.36
PVT1-204ENST00000517525 KRTAP16-1A8MUX0 517 aa12.78□□□□□ -0.36
PVT1-204ENST00000517525 C9JAW5 83 aa12.78□□□□□ -0.36
PVT1-204ENST00000517525 TSTD3H0UI37 97 aa12.78□□□□□ -0.36
PVT1-204ENST00000517525 COX6B2Q6YFQ2 88 aa12.77□□□□□ -0.37
PVT1-204ENST00000517525 LCE2DQ5TA82 110 aaPredicted RBP12.76□□□□□ -0.37
PVT1-204ENST00000517525 NAA38Q9BRA0 125 aaKnown RBP12.76□□□□□ -0.37
PVT1-204ENST00000517525 JMJD7-PLA2G4BH0Y9G9 81 aa12.75□□□□□ -0.37
PVT1-204ENST00000517525 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
PVT1-204ENST00000517525 DEFB116Q30KQ4 102 aa12.74□□□□□ -0.37
PVT1-204ENST00000517525 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
PVT1-204ENST00000517525 A0A1B0GW54 56 aa12.73□□□□□ -0.37
PVT1-204ENST00000517525 NOTCH2NLQ7Z3S9 236 aa12.72□□□□□ -0.37
PVT1-204ENST00000517525 FLGP20930 4061 aaPredicted RBP12.72□□□□□ -0.37
PVT1-204ENST00000517525 TRBV20-1A0A075B6N2 111 aa12.71□□□□□ -0.37
PVT1-204ENST00000517525 LOC110117498A0A087WWA1 95 aa12.71□□□□□ -0.37
PVT1-204ENST00000517525 LOC105371267A0A1B0GV96 52 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms