RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 DEFB131BA0A096LNP1 70 aa-0.1□□□□□ -2.43
RNU6-488P-201ENST00000515918 PDCD5O14737 125 aa-0.1□□□□□ -2.43
RNU6-488P-201ENST00000515918 RNF17Q9BXT8 1623 aaKnown RBP-0.1□□□□□ -2.43
RNU6-488P-201ENST00000515918 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
RNU6-488P-201ENST00000515918 AKAP13Q12802 2813 aa-0.11□□□□□ -2.43
RNU6-488P-201ENST00000515918 LYNX1G3V0Z9 82 aa-0.11□□□□□ -2.43
RNU6-488P-201ENST00000515918 TJP1Q07157 1748 aa-0.11□□□□□ -2.43
RNU6-488P-201ENST00000515918 PKHD1P08F94 4074 aa-0.11□□□□□ -2.43
RNU6-488P-201ENST00000515918 ASXL1Q8IXJ9 1541 aa-0.13□□□□□ -2.43
RNU6-488P-201ENST00000515918 NRAPQ86VF7 1730 aa-0.13□□□□□ -2.43
RNU6-488P-201ENST00000515918 ABCA9Q8IUA7 1624 aa-0.13□□□□□ -2.43
RNU6-488P-201ENST00000515918 UBL5Q9BZL1 73 aa-0.14□□□□□ -2.43
RNU6-488P-201ENST00000515918 ITSN1Q15811 1721 aa-0.14□□□□□ -2.43
RNU6-488P-201ENST00000515918 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
RNU6-488P-201ENST00000515918 STAB1Q9NY15 2570 aa-0.15□□□□□ -2.43
RNU6-488P-201ENST00000515918 ATXN8Q156A1 80 aa-0.15□□□□□ -2.43
RNU6-488P-201ENST00000515918 HECTD1Q9ULT8 2610 aa-0.15□□□□□ -2.43
RNU6-488P-201ENST00000515918 H0YGG7 62 aa-0.16□□□□□ -2.44
RNU6-488P-201ENST00000515918 MRPL33O75394 65 aaKnown RBP-0.16□□□□□ -2.44
RNU6-488P-201ENST00000515918 DEFB130BP0DP73 79 aa-0.16□□□□□ -2.44
RNU6-488P-201ENST00000515918 DEFB130AP0DP74 79 aa-0.16□□□□□ -2.44
RNU6-488P-201ENST00000515918 CRIP1P50238 77 aa-0.16□□□□□ -2.44
RNU6-488P-201ENST00000515918 ZC3H13Q5T200 1668 aaKnown RBP-0.17□□□□□ -2.44
RNU6-488P-201ENST00000515918 IAPPP10997 89 aa-0.17□□□□□ -2.44
RNU6-488P-201ENST00000515918 KRTAP6-2Q3LI66 62 aa-0.17□□□□□ -2.44
RNU6-488P-201ENST00000515918 THOC2Q8NI27 1593 aaKnown RBP-0.17□□□□□ -2.44
RNU6-488P-201ENST00000515918 PKD1P98161 4303 aa-0.17□□□□□ -2.44
RNU6-488P-201ENST00000515918 CREBBPQ92793 2442 aa-0.18□□□□□ -2.44
RNU6-488P-201ENST00000515918 DNMBPQ6XZF7 1577 aa-0.19□□□□□ -2.44
RNU6-488P-201ENST00000515918 NBASA2RRP1 2371 aa-0.19□□□□□ -2.44
RNU6-488P-201ENST00000515918 NHSQ6T4R5 1651 aa-0.2□□□□□ -2.44
RNU6-488P-201ENST00000515918 ZANQ9Y493 2812 aa-0.2□□□□□ -2.44
RNU6-488P-201ENST00000515918 MADDQ8WXG6 1647 aa-0.2□□□□□ -2.44
RNU6-488P-201ENST00000515918 ETDCA0A1B0GVM5 59 aa-0.21□□□□□ -2.44
RNU6-488P-201ENST00000515918 TNRC18O15417 2968 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-488P-201ENST00000515918 SPRR2AP35326 72 aa-0.21□□□□□ -2.44
RNU6-488P-201ENST00000515918 INO80Q9ULG1 1556 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-488P-201ENST00000515918 DSPP15924 2871 aaKnown RBP-0.22□□□□□ -2.44
RNU6-488P-201ENST00000515918 LYSTQ99698 3801 aa-0.22□□□□□ -2.44
RNU6-488P-201ENST00000515918 GNG13Q9P2W3 67 aa-0.22□□□□□ -2.44
RNU6-488P-201ENST00000515918 FLGP20930 4061 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-488P-201ENST00000515918 MUC2Q02817 5179 aa-0.22□□□□□ -2.45
RNU6-488P-201ENST00000515918 SVEP1Q4LDE5 3571 aa-0.23□□□□□ -2.45
RNU6-488P-201ENST00000515918 SSPOA2VEC9 5147 aa-0.24□□□□□ -2.45
RNU6-488P-201ENST00000515918 KIAA0586Q9BVV6 1533 aa-0.24□□□□□ -2.45
RNU6-488P-201ENST00000515918 DNAH9Q9NYC9 4486 aa-0.26□□□□□ -2.45
RNU6-488P-201ENST00000515918 AHNAKQ09666 5890 aaKnown RBP-0.26□□□□□ -2.45
RNU6-488P-201ENST00000515918 PRRC2CQ9Y520 2896 aaKnown RBP-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 EFCAB5A4FU69 1503 aa-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 PRLHP81277 87 aa-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 DEFB114Q30KQ6 69 aa-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 SETD2Q9BYW2 2564 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 SPTBN4Q9H254 2564 aa-0.27□□□□□ -2.45
RNU6-488P-201ENST00000515918 KRTAP6-1Q3LI64 71 aa-0.28□□□□□ -2.45
RNU6-488P-201ENST00000515918 C3P01024 1663 aa-0.28□□□□□ -2.45
RNU6-488P-201ENST00000515918 MROH1Q8NDA8 1641 aa-0.28□□□□□ -2.45
RNU6-488P-201ENST00000515918 ABCC6O95255 1503 aa-0.29□□□□□ -2.46
RNU6-488P-201ENST00000515918 ITSN2Q9NZM3 1697 aa-0.3□□□□□ -2.46
RNU6-488P-201ENST00000515918 SONP18583 2426 aaKnown RBP-0.3□□□□□ -2.46
RNU6-488P-201ENST00000515918 LINC01549A6NIU2 74 aa-0.31□□□□□ -2.46
RNU6-488P-201ENST00000515918 SPRR2EP22531 72 aa-0.31□□□□□ -2.46
RNU6-488P-201ENST00000515918 DEFB106AQ8N104 65 aa-0.31□□□□□ -2.46
RNU6-488P-201ENST00000515918 S4R3F8 94 aa-0.31□□□□□ -2.46
RNU6-488P-201ENST00000515918 FAT3Q8TDW7 4589 aa-0.31□□□□□ -2.46
RNU6-488P-201ENST00000515918 H3BNG1 76 aa-0.32□□□□□ -2.46
RNU6-488P-201ENST00000515918 SRRM2Q9UQ35 2752 aaKnown RBP-0.32□□□□□ -2.46
RNU6-488P-201ENST00000515918 CUBNO60494 3623 aa-0.32□□□□□ -2.46
RNU6-488P-201ENST00000515918 VPS13BQ7Z7G8 4022 aa-0.33□□□□□ -2.46
RNU6-488P-201ENST00000515918 MINOS1Q5TGZ0 78 aa-0.33□□□□□ -2.46
RNU6-488P-201ENST00000515918 STAB2Q8WWQ8 2551 aa-0.34□□□□□ -2.46
RNU6-488P-201ENST00000515918 RPS27P42677 84 aaKnown RBP-0.34□□□□□ -2.46
RNU6-488P-201ENST00000515918 RPS27LQ71UM5 84 aaKnown RBP-0.34□□□□□ -2.46
RNU6-488P-201ENST00000515918 NBEAL1Q6ZS30 2694 aa-0.35□□□□□ -2.47
RNU6-488P-201ENST00000515918 NF1P21359 2839 aa-0.36□□□□□ -2.47
RNU6-488P-201ENST00000515918 BPTFQ12830 3046 aa-0.36□□□□□ -2.47
RNU6-488P-201ENST00000515918 ANK3Q12955 4377 aaKnown RBP-0.36□□□□□ -2.47
RNU6-488P-201ENST00000515918 KRTAP19-7Q3SYF9 63 aa-0.36□□□□□ -2.47
RNU6-488P-201ENST00000515918 PDZD2O15018 2839 aa-0.37□□□□□ -2.47
RNU6-488P-201ENST00000515918 A0A087WWC5 75 aa-0.37□□□□□ -2.47
RNU6-488P-201ENST00000515918 C9orf92A6NGG3 77 aa-0.37□□□□□ -2.47
RNU6-488P-201ENST00000515918 WT1-ASQ06250 92 aa-0.37□□□□□ -2.47
RNU6-488P-201ENST00000515918 ABCA6Q8N139 1617 aa-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 NCBP2-AS2Q69YL0 99 aa-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 PKHD1L1Q86WI1 4243 aa-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 KIF1AQ12756 1690 aa-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 CCDC180Q9P1Z9 1646 aa-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 APOBP04114 4563 aaKnown RBP-0.38□□□□□ -2.47
RNU6-488P-201ENST00000515918 CEP290O15078 2479 aa-0.39□□□□□ -2.47
RNU6-488P-201ENST00000515918 SPG11Q96JI7 2443 aa-0.4□□□□□ -2.47
RNU6-488P-201ENST00000515918 PKD1L2Q7Z442 2459 aa-0.4□□□□□ -2.47
RNU6-488P-201ENST00000515918 ANKRD36CQ5JPF3 1778 aa-0.4□□□□□ -2.47
RNU6-488P-201ENST00000515918 GLI2P10070 1586 aa-0.4□□□□□ -2.47
RNU6-488P-201ENST00000515918 TGP01266 2768 aa-0.41□□□□□ -2.47
RNU6-488P-201ENST00000515918 C6orf48Q9UBA6 75 aa-0.41□□□□□ -2.48
RNU6-488P-201ENST00000515918 DNAH6Q9C0G6 4158 aa-0.42□□□□□ -2.48
RNU6-488P-201ENST00000515918 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
RNU6-488P-201ENST00000515918 MT1AP04731 61 aa-0.42□□□□□ -2.48
RNU6-488P-201ENST00000515918 DNAH3Q8TD57 4116 aa-0.42□□□□□ -2.48
RNU6-488P-201ENST00000515918 ZZEF1O43149 2961 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms