RNA–Protein interactions for RNA: ENST00000515484.2

GPBP1-209, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-209ENST00000515484 GPR179Q6PRD1 2367 aa1.95□□□□□ -2.1
GPBP1-209ENST00000515484 MAP1BP46821 2468 aaKnown RBP1.95□□□□□ -2.1
GPBP1-209ENST00000515484 H0YAA0 97 aa1.95□□□□□ -2.1
GPBP1-209ENST00000515484 LYNX1P0DP58 116 aa1.95□□□□□ -2.1
GPBP1-209ENST00000515484 LELP1Q5T871 98 aa1.95□□□□□ -2.1
GPBP1-209ENST00000515484 NBEAQ8NFP9 2946 aa1.95□□□□□ -2.1
GPBP1-209ENST00000515484 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
GPBP1-209ENST00000515484 KRTAP13-2Q52LG2 175 aa1.94□□□□□ -2.1
GPBP1-209ENST00000515484 COX6B2Q6YFQ2 88 aa1.94□□□□□ -2.1
GPBP1-209ENST00000515484 SSBP3-AS1Q7Z2R9 100 aa1.94□□□□□ -2.1
GPBP1-209ENST00000515484 A0A1W2PNN7 141 aa1.93□□□□□ -2.1
GPBP1-209ENST00000515484 BRD3OSQ6XYD6 125 aa1.93□□□□□ -2.1
GPBP1-209ENST00000515484 ANKRD17O75179 2603 aaKnown RBP1.93□□□□□ -2.1
GPBP1-209ENST00000515484 TNRC18O15417 2968 aaPredicted RBP1.92□□□□□ -2.1
GPBP1-209ENST00000515484 EP400Q96L91 3159 aa1.92□□□□□ -2.1
GPBP1-209ENST00000515484 MKI67P46013 3256 aaKnown RBP1.92□□□□□ -2.1
GPBP1-209ENST00000515484 A0A1B0GU33 70 aa1.92□□□□□ -2.1
GPBP1-209ENST00000515484 CEP250Q9BV73 2442 aa1.92□□□□□ -2.1
GPBP1-209ENST00000515484 CFAP47Q6ZTR5 3102 aa1.92□□□□□ -2.1
GPBP1-209ENST00000515484 XIRP2A4UGR9 3374 aa1.92□□□□□ -2.1
GPBP1-209ENST00000515484 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
GPBP1-209ENST00000515484 Q6ZSA8 131 aa1.91□□□□□ -2.1
GPBP1-209ENST00000515484 CHD6Q8TD26 2715 aa1.91□□□□□ -2.1
GPBP1-209ENST00000515484 PIEZO2Q9H5I5 2752 aa1.91□□□□□ -2.1
GPBP1-209ENST00000515484 SPTBN5Q9NRC6 3674 aaKnown RBP1.9□□□□□ -2.1
GPBP1-209ENST00000515484 EP300Q09472 2414 aaPredicted RBP1.9□□□□□ -2.1
GPBP1-209ENST00000515484 TRANK1O15050 2925 aa1.9□□□□□ -2.11
GPBP1-209ENST00000515484 H1FX-AS1Q4G0G2 97 aa1.9□□□□□ -2.11
GPBP1-209ENST00000515484 COL6A6A6NMZ7 2263 aa1.9□□□□□ -2.11
GPBP1-209ENST00000515484 CNOT1A5YKK6 2376 aaKnown RBP1.9□□□□□ -2.11
GPBP1-209ENST00000515484 DEFB136Q30KP8 78 aa1.89□□□□□ -2.11
GPBP1-209ENST00000515484 CHD7Q9P2D1 2997 aa1.89□□□□□ -2.11
GPBP1-209ENST00000515484 H3BNG1 76 aa1.88□□□□□ -2.11
GPBP1-209ENST00000515484 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
GPBP1-209ENST00000515484 FRYLO94915 3013 aa1.88□□□□□ -2.11
GPBP1-209ENST00000515484 FBN1P35555 2871 aaKnown RBP1.87□□□□□ -2.11
GPBP1-209ENST00000515484 DEFB130BP0DP73 79 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 DEFB130AP0DP74 79 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 IGF2RP11717 2491 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 HTTP42858 3142 aa1.87□□□□□ -2.11
GPBP1-209ENST00000515484 TPRP12270 2363 aaKnown RBP1.87□□□□□ -2.11
GPBP1-209ENST00000515484 ACACAQ13085 2346 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 AKAP13Q12802 2813 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 ABCA2Q9BZC7 2435 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 KALRNO60229 2985 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 RPL37P61927 97 aaKnown RBP1.86□□□□□ -2.11
GPBP1-209ENST00000515484 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 DNAH14Q0VDD8 3507 aa1.86□□□□□ -2.11
GPBP1-209ENST00000515484 RP1L1Q8IWN7 2480 aaPredicted RBP1.85□□□□□ -2.11
GPBP1-209ENST00000515484 AKAP6Q13023 2319 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 PCNX1Q96RV3 2341 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
GPBP1-209ENST00000515484 LINC01556Q5JQF7 62 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 C10orf99Q6UWK7 81 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 TRIOO75962 3097 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 USP34Q70CQ2 3546 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 APC2O95996 2303 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.11
GPBP1-209ENST00000515484 FRYQ5TBA9 3013 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 NCOR1O75376 2440 aa1.85□□□□□ -2.11
GPBP1-209ENST00000515484 CHD9Q3L8U1 2897 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 CELSR2Q9HCU4 2923 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 PTPRZ1P23471 2315 aaPredicted RBP1.84□□□□□ -2.11
GPBP1-209ENST00000515484 SPTBN4Q9H254 2564 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 A0A096LPF7 62 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 K7EIL1 84 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 PRLHP81277 87 aa1.84□□□□□ -2.11
GPBP1-209ENST00000515484 ANKHD1Q8IWZ3 2542 aaKnown RBP1.83□□□□□ -2.12
GPBP1-209ENST00000515484 PRUNE2Q8WUY3 3088 aa1.83□□□□□ -2.12
GPBP1-209ENST00000515484 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
GPBP1-209ENST00000515484 DCHS1Q96JQ0 3298 aa1.83□□□□□ -2.12
GPBP1-209ENST00000515484 DMDP11532 3685 aa1.83□□□□□ -2.12
GPBP1-209ENST00000515484 WDFY4Q6ZS81 3184 aa1.83□□□□□ -2.12
GPBP1-209ENST00000515484 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
GPBP1-209ENST00000515484 ROS1P08922 2347 aa1.82□□□□□ -2.12
GPBP1-209ENST00000515484 BOD1L1Q8NFC6 3051 aa1.82□□□□□ -2.12
GPBP1-209ENST00000515484 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
GPBP1-209ENST00000515484 C5orf42Q9H799 3197 aa1.82□□□□□ -2.12
GPBP1-209ENST00000515484 LAMA3Q16787 3333 aa1.82□□□□□ -2.12
GPBP1-209ENST00000515484 LAMA2P24043 3122 aaKnown RBP1.82□□□□□ -2.12
GPBP1-209ENST00000515484 OTOGQ6ZRI0 2925 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 NCOR2Q9Y618 2525 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 SPART-AS1P0CW21 52 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 DEFB124Q8NES8 71 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 SPTA1P02549 2419 aa1.81□□□□□ -2.12
GPBP1-209ENST00000515484 ASH1LQ9NR48 2969 aaKnown RBP1.81□□□□□ -2.12
GPBP1-209ENST00000515484 ZFHX2Q9C0A1 2572 aaPredicted RBP1.81□□□□□ -2.12
GPBP1-209ENST00000515484 FREM2Q5SZK8 3169 aa1.8□□□□□ -2.12
GPBP1-209ENST00000515484 CACNA1HO95180 2353 aa1.79□□□□□ -2.12
GPBP1-209ENST00000515484 C2CD3Q4AC94 2353 aa1.79□□□□□ -2.12
GPBP1-209ENST00000515484 WDFY3Q8IZQ1 3526 aa1.79□□□□□ -2.12
GPBP1-209ENST00000515484 INE1O15225 51 aa1.79□□□□□ -2.12
GPBP1-209ENST00000515484 BRCA2P51587 3418 aa1.79□□□□□ -2.12
GPBP1-209ENST00000515484 SPEGQ15772 3267 aa1.78□□□□□ -2.12
GPBP1-209ENST00000515484 ZDBF2Q9HCK1 2354 aa1.78□□□□□ -2.12
GPBP1-209ENST00000515484 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
GPBP1-209ENST00000515484 DEFB123Q8N688 67 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms