RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 LRRC9Q6ZRR7 1453 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 SPTY2D1-AS1A0A0U1RR47 76 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 KANTRA0A1W2PQU2 76 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 HERC2O95714 4834 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 SRRM2Q9UQ35 2752 aaKnown RBP0.31□□□□□ -2.36
SUB1-212ENST00000513013 DIP2AQ14689 1571 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 LYSTQ99698 3801 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 HMCN2Q8NDA2 5059 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 TMEM131LA2VDJ0 1609 aa0.31□□□□□ -2.36
SUB1-212ENST00000513013 WIZO95785 1651 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 C5P01031 1676 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.3□□□□□ -2.362e-6■■■□□ 15.7
SUB1-212ENST00000513013 WNK1Q9H4A3 2382 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 TRRAPQ9Y4A5 3859 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 MAP3K4Q9Y6R4 1608 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 PREX1Q8TCU6 1659 aa0.3□□□□□ -2.36
SUB1-212ENST00000513013 ACANP16112 2415 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 CCDC18Q5T9S5 1454 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 CEP170BQ9Y4F5 1589 aaPredicted RBP0.29□□□□□ -2.36
SUB1-212ENST00000513013 CEBPZOSA8MTT3 80 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 CCL22O00626 93 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 S100A13Q99584 98 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 PKHD1P08F94 4074 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 EEA1Q15075 1411 aa0.29□□□□□ -2.36
SUB1-212ENST00000513013 DNAJC13O75165 2243 aa0.28□□□□□ -2.36
SUB1-212ENST00000513013 MAGI2Q86UL8 1455 aa0.28□□□□□ -2.37
SUB1-212ENST00000513013 PTPRQQ9UMZ3 2332 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 CMYA5Q8N3K9 4069 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 COX7BP24311 80 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 LELP1Q5T871 98 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 MRPL34Q9BQ48 92 aaKnown RBP0.27□□□□□ -2.37
SUB1-212ENST00000513013 USF3Q68DE3 2245 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 CSPG4Q6UVK1 2322 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 NBASA2RRP1 2371 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 CLIP1P30622 1438 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 KIAA0586Q9BVV6 1533 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 KIF14Q15058 1648 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 RNF17Q9BXT8 1623 aaKnown RBP0.27□□□□□ -2.37
SUB1-212ENST00000513013 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
SUB1-212ENST00000513013 APC2O95996 2303 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 ADIRFQ15847 76 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 GAFA1Q96PS6 74 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 FXYD6Q9H0Q3 95 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 ST20Q9HBF5 79 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 APLNQ9ULZ1 77 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 ALMS1Q8TCU4 4167 aa0.26□□□□□ -2.37
SUB1-212ENST00000513013 PRKDCP78527 4128 aaKnown RBP0.26□□□□□ -2.37
SUB1-212ENST00000513013 PKD1P98161 4303 aa0.25□□□□□ -2.37
SUB1-212ENST00000513013 ADCY10Q96PN6 1610 aa0.25□□□□□ -2.37
SUB1-212ENST00000513013 PLCE1Q9P212 2302 aa0.25□□□□□ -2.37
SUB1-212ENST00000513013 RGPD1P0DJD0 1748 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 ZC3H13Q5T200 1668 aaKnown RBP0.24□□□□□ -2.37
SUB1-212ENST00000513013 PREX2Q70Z35 1606 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 ADAMTS12P58397 1594 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 MAP3K1Q13233 1512 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 ASXL1Q8IXJ9 1541 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 KDM5DQ9BY66 1539 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 NDUFB1O75438 58 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 RPL38P63173 70 aaKnown RBP0.24□□□□□ -2.37
SUB1-212ENST00000513013 HSPG2P98160 4391 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 TJP1Q07157 1748 aa0.24□□□□□ -2.37
SUB1-212ENST00000513013 TNRC6CQ9HCJ0 1690 aaKnown RBP0.24□□□□□ -2.37
SUB1-212ENST00000513013 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
SUB1-212ENST00000513013 AKAP6Q13023 2319 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 TRAV21A0A0B4J279 112 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 KLK9Q2XQG4 91 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 RGPD4Q7Z3J3 1758 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 DNAH1Q9P2D7 4330 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 UGGT1Q9NYU2 1555 aa0.23□□□□□ -2.37
SUB1-212ENST00000513013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.23□□□□□ -2.372e-8■■■■□ 20.6
SUB1-212ENST00000513013 UBR1Q8IWV7 1749 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
SUB1-212ENST00000513013 LCE6AA0A183 80 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 FAT3Q8TDW7 4589 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 USH2AO75445 5202 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 DNAH9Q9NYC9 4486 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 ERVK-7P63135 1459 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 ARHGAP35Q9NRY4 1499 aa0.22□□□□□ -2.37
SUB1-212ENST00000513013 CROCC2H7BZ55 1655 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 MYH4Q9Y623 1939 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 USP32Q8NFA0 1604 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 DNAH6Q9C0G6 4158 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 GLI2P10070 1586 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 KRTAP19-6Q3LI70 58 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 H1FX-AS1Q4G0G2 97 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 ANK3Q12955 4377 aaKnown RBP0.21□□□□□ -2.38
SUB1-212ENST00000513013 FAT2Q9NYQ8 4349 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 URB2Q14146 1524 aaKnown RBP0.21□□□□□ -2.38
SUB1-212ENST00000513013 FMN2Q9NZ56 1722 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 VPS13BQ7Z7G8 4022 aa0.21□□□□□ -2.38
SUB1-212ENST00000513013 DYNC2H1Q8NCM8 4307 aaKnown RBP0.2□□□□□ -2.38
SUB1-212ENST00000513013 RGPD3A6NKT7 1758 aaPredicted RBP0.2□□□□□ -2.38
SUB1-212ENST00000513013 DEFB121Q5J5C9 76 aa0.2□□□□□ -2.38
SUB1-212ENST00000513013 COX6B2Q6YFQ2 88 aa0.2□□□□□ -2.38
SUB1-212ENST00000513013 WFDC9Q8NEX5 89 aa0.2□□□□□ -2.38
SUB1-212ENST00000513013 CDKN2A-AS1Q9UH64 79 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms