RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ZNF73O43830 326 aaPredicted RBP6.32□□□□□ -1.4
RNF4-216ENST00000511859 HINT1P49773 126 aaPredicted RBP6.32□□□□□ -1.4
RNF4-216ENST00000511859 NHP2Q9NX24 153 aaKnown RBP6.32□□□□□ -1.4
RNF4-216ENST00000511859 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
RNF4-216ENST00000511859 K7ERJ3 54 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 SPRR1AP35321 89 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 C6orf99Q4VX62 202 aa6.31□□□□□ -1.4
RNF4-216ENST00000511859 A0A0B4J2C4 111 aa6.3□□□□□ -1.4
RNF4-216ENST00000511859 B5MCH6 92 aa6.3□□□□□ -1.4
RNF4-216ENST00000511859 BATFQ16520 125 aa6.29□□□□□ -1.4
RNF4-216ENST00000511859 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
RNF4-216ENST00000511859 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
RNF4-216ENST00000511859 SSPOA2VEC9 5147 aa6.28□□□□□ -1.4
RNF4-216ENST00000511859 Q1RN00 199 aa6.28□□□□□ -1.4
RNF4-216ENST00000511859 LINC00483Q53H64 154 aa6.28□□□□□ -1.4
RNF4-216ENST00000511859 PRO1854Q9UHT4 67 aa6.28□□□□□ -1.4
RNF4-216ENST00000511859 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
RNF4-216ENST00000511859 COX7BP24311 80 aa6.27□□□□□ -1.41
RNF4-216ENST00000511859 Q6ZRX8 168 aa6.27□□□□□ -1.41
RNF4-216ENST00000511859 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
RNF4-216ENST00000511859 Q9BRP9 147 aa6.27□□□□□ -1.41
RNF4-216ENST00000511859 M0R143 59 aa6.26□□□□□ -1.41
RNF4-216ENST00000511859 ERC2-IT1O76042 136 aa6.26□□□□□ -1.41
RNF4-216ENST00000511859 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
RNF4-216ENST00000511859 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
RNF4-216ENST00000511859 USH2AO75445 5202 aa6.25□□□□□ -1.41
RNF4-216ENST00000511859 ELOF1P60002 83 aaKnown RBP6.25□□□□□ -1.41
RNF4-216ENST00000511859 MOBPQ13875 183 aa6.25□□□□□ -1.41
RNF4-216ENST00000511859 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
RNF4-216ENST00000511859 A0A1B0GWB2 263 aa6.24□□□□□ -1.41
RNF4-216ENST00000511859 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
RNF4-216ENST00000511859 PSMB2P49721 201 aa6.23□□□□□ -1.41
RNF4-216ENST00000511859 VAMP3Q15836 100 aa6.23□□□□□ -1.41
RNF4-216ENST00000511859 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
RNF4-216ENST00000511859 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
RNF4-216ENST00000511859 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
RNF4-216ENST00000511859 TRBV7-6A0A0J9YX20 115 aa6.22□□□□□ -1.41
RNF4-216ENST00000511859 NAA38Q9BRA0 125 aaKnown RBP6.22□□□□□ -1.41
RNF4-216ENST00000511859 TRIAP1O43715 76 aa6.21□□□□□ -1.41
RNF4-216ENST00000511859 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.41
RNF4-216ENST00000511859 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.41
RNF4-216ENST00000511859 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
RNF4-216ENST00000511859 GHRHP01286 108 aa6.2□□□□□ -1.42
RNF4-216ENST00000511859 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
RNF4-216ENST00000511859 LINC00575Q6W349 94 aa6.19□□□□□ -1.42
RNF4-216ENST00000511859 DEFB105AQ8NG35 78 aa6.19□□□□□ -1.42
RNF4-216ENST00000511859 CLEC2BQ92478 149 aa6.19□□□□□ -1.42
RNF4-216ENST00000511859 FAM218AQ96MZ4 157 aa6.18□□□□□ -1.42
RNF4-216ENST00000511859 SNHG12Q9BXW3 62 aa6.18□□□□□ -1.42
RNF4-216ENST00000511859 hADV29S1A0JD25 119 aa6.18□□□□□ -1.42
RNF4-216ENST00000511859 H0YGX0 51 aa6.17□□□□□ -1.42
RNF4-216ENST00000511859 SCGB1C2P0DMR2 95 aa6.17□□□□□ -1.42
RNF4-216ENST00000511859 COX6CP09669 75 aa6.16□□□□□ -1.42
RNF4-216ENST00000511859 Q6ZQY7 126 aa6.16□□□□□ -1.42
RNF4-216ENST00000511859 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.43
RNF4-216ENST00000511859 LIMD2Q9BT23 127 aa6.15□□□□□ -1.43
RNF4-216ENST00000511859 H3BUT2 72 aa6.14□□□□□ -1.43
RNF4-216ENST00000511859 TAX1BP3O14907 124 aa6.14□□□□□ -1.43
RNF4-216ENST00000511859 C9orf153Q5TBE3 101 aa6.14□□□□□ -1.43
RNF4-216ENST00000511859 SNCGO76070 127 aa6.12□□□□□ -1.43
RNF4-216ENST00000511859 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
RNF4-216ENST00000511859 TEX49A0A1B0GTD5 131 aa6.11□□□□□ -1.43
RNF4-216ENST00000511859 C9orf118A6NHY6 69 aa6.11□□□□□ -1.43
RNF4-216ENST00000511859 RPL37P61927 97 aaKnown RBP6.11□□□□□ -1.43
RNF4-216ENST00000511859 COL5A1-AS1Q5SY13 56 aa6.11□□□□□ -1.43
RNF4-216ENST00000511859 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.11□□□□□ -1.43
RNF4-216ENST00000511859 IGLV5-48A0A075B6I7 105 aa6.1□□□□□ -1.43
RNF4-216ENST00000511859 TCL1BO95988 128 aa6.1□□□□□ -1.43
RNF4-216ENST00000511859 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
RNF4-216ENST00000511859 LST1O00453 97 aa6.09□□□□□ -1.43
RNF4-216ENST00000511859 DNAL4O96015 105 aa6.09□□□□□ -1.43
RNF4-216ENST00000511859 SPRR1BP22528 89 aa6.09□□□□□ -1.43
RNF4-216ENST00000511859 A0A1B0GX51 115 aa6.08□□□□□ -1.44
RNF4-216ENST00000511859 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
RNF4-216ENST00000511859 LAMTOR3Q9UHA4 124 aa6.08□□□□□ -1.44
RNF4-216ENST00000511859 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
RNF4-216ENST00000511859 TRACP01848 142 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 FABP2P12104 132 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 LYRM7Q5U5X0 104 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 ORMDL1Q9P0S3 153 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 A0A0G2JQZ4 141 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 A0A1B0GV72 72 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 Q6Q795 121 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
RNF4-216ENST00000511859 F8WEM9 126 aa6.05□□□□□ -1.44
RNF4-216ENST00000511859 OCIAD2Q56VL3 154 aa6.05□□□□□ -1.44
RNF4-216ENST00000511859 TRBV20-1A0A075B6N2 111 aa6.03□□□□□ -1.44
RNF4-216ENST00000511859 NDUFV3P56181 108 aaKnown RBP6.03□□□□□ -1.44
RNF4-216ENST00000511859 MTURNQ8N3F0 131 aa6.03□□□□□ -1.44
RNF4-216ENST00000511859 PPDPFLQ8WWR9 84 aa6.03□□□□□ -1.44
RNF4-216ENST00000511859 C9JAW5 83 aa6.02□□□□□ -1.45
RNF4-216ENST00000511859 H3BMG7 143 aa6.02□□□□□ -1.45
RNF4-216ENST00000511859 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
RNF4-216ENST00000511859 CD164Q04900 197 aa6.02□□□□□ -1.45
RNF4-216ENST00000511859 SPCS1Q9Y6A9 102 aa6.02□□□□□ -1.45
RNF4-216ENST00000511859 Q5XG85 94 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms