RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.36□□□□□ -0.75
UBE3D-207ENST00000509102 KRTAP9-2Q9BYQ4 174 aa10.36□□□□□ -0.75
UBE3D-207ENST00000509102 hADV29S1A0JD25 119 aa10.35□□□□□ -0.75
UBE3D-207ENST00000509102 BVES-AS1Q5T3Y7 98 aa10.35□□□□□ -0.75
UBE3D-207ENST00000509102 LINC00575Q6W349 94 aa10.35□□□□□ -0.75
UBE3D-207ENST00000509102 DLEU1O43261 78 aa10.34□□□□□ -0.75
UBE3D-207ENST00000509102 C12orf57Q99622 126 aa10.34□□□□□ -0.75
UBE3D-207ENST00000509102 Q6ZQY7 126 aa10.32□□□□□ -0.76
UBE3D-207ENST00000509102 Q5XG85 94 aa10.31□□□□□ -0.76
UBE3D-207ENST00000509102 KRTAP9-6A0A140TA67 174 aa10.3□□□□□ -0.76
UBE3D-207ENST00000509102 SPATA45Q537H7 98 aa10.3□□□□□ -0.76
UBE3D-207ENST00000509102 VAMP8Q9BV40 100 aa10.3□□□□□ -0.76
UBE3D-207ENST00000509102 PAM16Q9Y3D7 125 aa10.3□□□□□ -0.76
UBE3D-207ENST00000509102 SNCGO76070 127 aa10.29□□□□□ -0.76
UBE3D-207ENST00000509102 TCL1BO95988 128 aa10.29□□□□□ -0.76
UBE3D-207ENST00000509102 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
UBE3D-207ENST00000509102 C14orf144Q96I85 54 aa10.29□□□□□ -0.76
UBE3D-207ENST00000509102 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
UBE3D-207ENST00000509102 Q6JHZ5 121 aa10.27□□□□□ -0.77
UBE3D-207ENST00000509102 HIGD1BQ9P298 99 aa10.27□□□□□ -0.77
UBE3D-207ENST00000509102 FAT4Q6V0I7 4981 aa10.26□□□□□ -0.77
UBE3D-207ENST00000509102 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
UBE3D-207ENST00000509102 A0A0G2JQZ4 141 aa10.25□□□□□ -0.77
UBE3D-207ENST00000509102 C9orf92A6NGG3 77 aa10.25□□□□□ -0.77
UBE3D-207ENST00000509102 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
UBE3D-207ENST00000509102 C1orf195Q5TG92 126 aa10.23□□□□□ -0.77
UBE3D-207ENST00000509102 A0A0B4J2C4 111 aa10.22□□□□□ -0.77
UBE3D-207ENST00000509102 TMEM238LA0A1B0GVL6 79 aa10.22□□□□□ -0.77
UBE3D-207ENST00000509102 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
UBE3D-207ENST00000509102 CFC1P0CG37 223 aa10.22□□□□□ -0.77
UBE3D-207ENST00000509102 CLEC2BQ92478 149 aa10.22□□□□□ -0.77
UBE3D-207ENST00000509102 OCIAD2Q56VL3 154 aa10.21□□□□□ -0.77
UBE3D-207ENST00000509102 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
UBE3D-207ENST00000509102 H0YGX0 51 aa10.2□□□□□ -0.78
UBE3D-207ENST00000509102 IGFL1Q6UW32 110 aa10.17□□□□□ -0.78
UBE3D-207ENST00000509102 C2orf91Q6ZV80 131 aa10.17□□□□□ -0.78
UBE3D-207ENST00000509102 CEND1Q8N111 149 aa10.17□□□□□ -0.78
UBE3D-207ENST00000509102 TRBV7-7A0A0K0K1E9 115 aa10.15□□□□□ -0.78
UBE3D-207ENST00000509102 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
UBE3D-207ENST00000509102 PCOTHQ58A44 107 aa10.14□□□□□ -0.79
UBE3D-207ENST00000509102 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
UBE3D-207ENST00000509102 A0A1B0GX51 115 aa10.11□□□□□ -0.79
UBE3D-207ENST00000509102 H3BUT2 72 aa10.1□□□□□ -0.79
UBE3D-207ENST00000509102 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
UBE3D-207ENST00000509102 FXYD2P54710 66 aa10.07□□□□□ -0.8
UBE3D-207ENST00000509102 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
UBE3D-207ENST00000509102 FAM218AQ96MZ4 157 aa10.07□□□□□ -0.8
UBE3D-207ENST00000509102 LST1O00453 97 aa10.06□□□□□ -0.8
UBE3D-207ENST00000509102 HSD52Q0P140 79 aa10.06□□□□□ -0.8
UBE3D-207ENST00000509102 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
UBE3D-207ENST00000509102 FABP2P12104 132 aa10.05□□□□□ -0.8
UBE3D-207ENST00000509102 RPL37P61927 97 aaKnown RBP10.05□□□□□ -0.8
UBE3D-207ENST00000509102 DNAL4O96015 105 aa10.04□□□□□ -0.8
UBE3D-207ENST00000509102 KRTAP4-12Q9BQ66 201 aa10.04□□□□□ -0.8
UBE3D-207ENST00000509102 TRIAP1O43715 76 aa10.03□□□□□ -0.8
UBE3D-207ENST00000509102 PSMB2P49721 201 aa10.03□□□□□ -0.8
UBE3D-207ENST00000509102 LCE3BQ5TA77 95 aa10.03□□□□□ -0.8
UBE3D-207ENST00000509102 Q6Q795 121 aa10.03□□□□□ -0.8
UBE3D-207ENST00000509102 TEN1Q86WV5 123 aa10.03□□□□□ -0.8
UBE3D-207ENST00000509102 TMA7Q9Y2S6 64 aaKnown RBP10.03□□□□□ -0.8
UBE3D-207ENST00000509102 H3BMG7 143 aa10.02□□□□□ -0.81
UBE3D-207ENST00000509102 COX6CP09669 75 aa10.02□□□□□ -0.81
UBE3D-207ENST00000509102 H3BQ85 93 aa10□□□□□ -0.81
UBE3D-207ENST00000509102 UQCR10Q9UDW1 63 aa10□□□□□ -0.81
UBE3D-207ENST00000509102 OBSCN-AS1Q96MR7 158 aa9.97□□□□□ -0.81
UBE3D-207ENST00000509102 ORMDL1Q9P0S3 153 aa9.97□□□□□ -0.81
UBE3D-207ENST00000509102 A0A087WSZ3 146 aa9.95□□□□□ -0.82
UBE3D-207ENST00000509102 K7ERJ3 54 aa9.95□□□□□ -0.82
UBE3D-207ENST00000509102 TMEM256-PLSCR3K7ERE1 68 aa9.93□□□□□ -0.82
UBE3D-207ENST00000509102 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
UBE3D-207ENST00000509102 Q75L30 129 aa9.91□□□□□ -0.82
UBE3D-207ENST00000509102 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
UBE3D-207ENST00000509102 Q96NJ1 140 aa9.89□□□□□ -0.83
UBE3D-207ENST00000509102 SCGB1C2P0DMR2 95 aa9.88□□□□□ -0.83
UBE3D-207ENST00000509102 COX6B2Q6YFQ2 88 aa9.88□□□□□ -0.83
UBE3D-207ENST00000509102 TRBV7-4A0A0J9YYF1 115 aa9.86□□□□□ -0.83
UBE3D-207ENST00000509102 A0A1B0GV72 72 aa9.86□□□□□ -0.83
UBE3D-207ENST00000509102 A0A1W2PNM2 257 aa9.86□□□□□ -0.83
UBE3D-207ENST00000509102 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
UBE3D-207ENST00000509102 SIGMAR1Q99720 223 aa9.85□□□□□ -0.83
UBE3D-207ENST00000509102 TRACP01848 142 aa9.84□□□□□ -0.83
UBE3D-207ENST00000509102 KRTAP9-9Q9BYP9 154 aa9.84□□□□□ -0.83
UBE3D-207ENST00000509102 KRTAP9-4Q9BYQ2 154 aa9.84□□□□□ -0.83
UBE3D-207ENST00000509102 UBE2V1Q13404 147 aa9.83□□□□□ -0.84
UBE3D-207ENST00000509102 KRTAP19-1Q8IUB9 90 aa9.82□□□□□ -0.84
UBE3D-207ENST00000509102 CCKP06307 115 aa9.81□□□□□ -0.84
UBE3D-207ENST00000509102 MT1HP80294 61 aa9.81□□□□□ -0.84
UBE3D-207ENST00000509102 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
UBE3D-207ENST00000509102 C20orf166-AS1Q96NR2 134 aa9.79□□□□□ -0.84
UBE3D-207ENST00000509102 M0R143 59 aa9.78□□□□□ -0.84
UBE3D-207ENST00000509102 M0R2T5 61 aa9.77□□□□□ -0.85
UBE3D-207ENST00000509102 DSCR8Q96T75 97 aa9.77□□□□□ -0.85
UBE3D-207ENST00000509102 A8MUU9 505 aa9.76□□□□□ -0.85
UBE3D-207ENST00000509102 DSCR10P59022 87 aa9.76□□□□□ -0.85
UBE3D-207ENST00000509102 RBM3P98179 157 aaKnown RBP9.76□□□□□ -0.85
UBE3D-207ENST00000509102 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
UBE3D-207ENST00000509102 LINC00313P59037 77 aa9.75□□□□□ -0.85
UBE3D-207ENST00000509102 C21orf62-AS1Q17RA5 79 aa9.72□□□□□ -0.85
UBE3D-207ENST00000509102 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
UBE3D-207ENST00000509102 BAALC-AS2P0C853 105 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms