RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 A0A0B4J2C4 111 aa13.38□□□□□ -0.27
SRPK1-210ENST00000508473 F8WEM9 126 aa13.38□□□□□ -0.27
SRPK1-210ENST00000508473 CEND1Q8N111 149 aa13.38□□□□□ -0.27
SRPK1-210ENST00000508473 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.36□□□□□ -0.27
SRPK1-210ENST00000508473 A0A0U1RQV1 116 aa13.33□□□□□ -0.28
SRPK1-210ENST00000508473 FXYD2P54710 66 aa13.32□□□□□ -0.28
SRPK1-210ENST00000508473 ASB16-AS1Q495Z4 193 aa13.3□□□□□ -0.28
SRPK1-210ENST00000508473 Q5XG85 94 aa13.3□□□□□ -0.28
SRPK1-210ENST00000508473 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
SRPK1-210ENST00000508473 A6NJY4 79 aa13.29□□□□□ -0.28
SRPK1-210ENST00000508473 XP32Q5T750 250 aa13.29□□□□□ -0.28
SRPK1-210ENST00000508473 PRO1854Q9UHT4 67 aa13.29□□□□□ -0.28
SRPK1-210ENST00000508473 OCIAD2Q56VL3 154 aa13.28□□□□□ -0.28
SRPK1-210ENST00000508473 FAM218AQ96MZ4 157 aa13.28□□□□□ -0.28
SRPK1-210ENST00000508473 C9orf92A6NGG3 77 aa13.27□□□□□ -0.29
SRPK1-210ENST00000508473 H0YGX0 51 aa13.27□□□□□ -0.29
SRPK1-210ENST00000508473 C1orf195Q5TG92 126 aa13.27□□□□□ -0.29
SRPK1-210ENST00000508473 SNHG12Q9BXW3 62 aa13.27□□□□□ -0.29
SRPK1-210ENST00000508473 SEC61BP60468 96 aaKnown RBP13.26□□□□□ -0.29
SRPK1-210ENST00000508473 Q6JHZ5 121 aa13.26□□□□□ -0.29
SRPK1-210ENST00000508473 IGFL1Q6UW32 110 aa13.26□□□□□ -0.29
SRPK1-210ENST00000508473 IGLV8-61A0A075B6I0 122 aa13.25□□□□□ -0.29
SRPK1-210ENST00000508473 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
SRPK1-210ENST00000508473 CLEC2BQ92478 149 aa13.24□□□□□ -0.29
SRPK1-210ENST00000508473 SNCGO76070 127 aa13.23□□□□□ -0.29
SRPK1-210ENST00000508473 HSD52Q0P140 79 aa13.23□□□□□ -0.29
SRPK1-210ENST00000508473 H3BUT2 72 aa13.22□□□□□ -0.29
SRPK1-210ENST00000508473 TCL1BO95988 128 aa13.22□□□□□ -0.29
SRPK1-210ENST00000508473 FAT4Q6V0I7 4981 aa13.21□□□□□ -0.29
SRPK1-210ENST00000508473 K7ERJ3 54 aa13.19□□□□□ -0.3
SRPK1-210ENST00000508473 KRTAP4-1Q9BYQ7 146 aa13.19□□□□□ -0.3
SRPK1-210ENST00000508473 TRBV7-7A0A0K0K1E9 115 aa13.18□□□□□ -0.3
SRPK1-210ENST00000508473 TRIAP1O43715 76 aa13.18□□□□□ -0.3
SRPK1-210ENST00000508473 UQCR10Q9UDW1 63 aa13.18□□□□□ -0.3
SRPK1-210ENST00000508473 NDUFV3P56181 108 aaKnown RBP13.13□□□□□ -0.31
SRPK1-210ENST00000508473 A0A1B0GX51 115 aa13.12□□□□□ -0.31
SRPK1-210ENST00000508473 PSMB2P49721 201 aa13.12□□□□□ -0.31
SRPK1-210ENST00000508473 FABP2P12104 132 aa13.1□□□□□ -0.31
SRPK1-210ENST00000508473 PCOTHQ58A44 107 aa13.08□□□□□ -0.32
SRPK1-210ENST00000508473 GHRHP01286 108 aa13.06□□□□□ -0.32
SRPK1-210ENST00000508473 LCE2AQ5TA79 106 aaPredicted RBP13.06□□□□□ -0.32
SRPK1-210ENST00000508473 H3BMG7 143 aa13.05□□□□□ -0.32
SRPK1-210ENST00000508473 COX6CP09669 75 aa13.03□□□□□ -0.32
SRPK1-210ENST00000508473 DNAL4O96015 105 aa13.02□□□□□ -0.33
SRPK1-210ENST00000508473 KRTAP9-2Q9BYQ4 174 aa13.02□□□□□ -0.33
SRPK1-210ENST00000508473 LST1O00453 97 aa13□□□□□ -0.33
SRPK1-210ENST00000508473 Q6Q795 121 aa13□□□□□ -0.33
SRPK1-210ENST00000508473 TEN1Q86WV5 123 aa13□□□□□ -0.33
SRPK1-210ENST00000508473 ORMDL1Q9P0S3 153 aa13□□□□□ -0.33
SRPK1-210ENST00000508473 A0A1B0GV72 72 aa12.97□□□□□ -0.33
SRPK1-210ENST00000508473 RPL37P61927 97 aaKnown RBP12.96□□□□□ -0.33
SRPK1-210ENST00000508473 A0A087WSZ3 146 aa12.95□□□□□ -0.34
SRPK1-210ENST00000508473 SS18L2Q9UHA2 77 aa12.95□□□□□ -0.34
SRPK1-210ENST00000508473 SCGB1C2P0DMR2 95 aa12.93□□□□□ -0.34
SRPK1-210ENST00000508473 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
SRPK1-210ENST00000508473 H3BQ85 93 aa12.91□□□□□ -0.34
SRPK1-210ENST00000508473 OBSCN-AS1Q96MR7 158 aa12.91□□□□□ -0.34
SRPK1-210ENST00000508473 TMEM256-PLSCR3K7ERE1 68 aa12.9□□□□□ -0.34
SRPK1-210ENST00000508473 ANKRD29Q8N6D5 301 aa12.9□□□□□ -0.34
SRPK1-210ENST00000508473 TRACP01848 142 aa12.87□□□□□ -0.35
SRPK1-210ENST00000508473 SMIM6P0DI80 62 aa12.86□□□□□ -0.35
SRPK1-210ENST00000508473 M0R143 59 aa12.84□□□□□ -0.35
SRPK1-210ENST00000508473 UBE2V1Q13404 147 aa12.83□□□□□ -0.36
SRPK1-210ENST00000508473 Q96NJ1 140 aa12.83□□□□□ -0.36
SRPK1-210ENST00000508473 NAA38Q9BRA0 125 aaKnown RBP12.8□□□□□ -0.36
SRPK1-210ENST00000508473 TRBV7-4A0A0J9YYF1 115 aa12.79□□□□□ -0.36
SRPK1-210ENST00000508473 LCE2CQ5TA81 110 aa12.79□□□□□ -0.36
SRPK1-210ENST00000508473 CCKP06307 115 aa12.78□□□□□ -0.36
SRPK1-210ENST00000508473 KRTAP19-2Q3LHN2 52 aa12.78□□□□□ -0.36
SRPK1-210ENST00000508473 Q75L30 129 aa12.76□□□□□ -0.37
SRPK1-210ENST00000508473 SIGMAR1Q99720 223 aa12.76□□□□□ -0.37
SRPK1-210ENST00000508473 BAALC-AS2P0C853 105 aa12.75□□□□□ -0.37
SRPK1-210ENST00000508473 ATP11AUNQ6ZP68 121 aa12.73□□□□□ -0.37
SRPK1-210ENST00000508473 VPS25Q9BRG1 176 aa12.73□□□□□ -0.37
SRPK1-210ENST00000508473 KRTAP9-6A0A140TA67 174 aa12.72□□□□□ -0.37
SRPK1-210ENST00000508473 DSCR10P59022 87 aa12.72□□□□□ -0.37
SRPK1-210ENST00000508473 RBM3P98179 157 aaKnown RBP12.72□□□□□ -0.37
SRPK1-210ENST00000508473 IGKV4-1P06312 121 aa12.71□□□□□ -0.37
SRPK1-210ENST00000508473 TSTD3H0UI37 97 aa12.7□□□□□ -0.38
SRPK1-210ENST00000508473 ATXN8Q156A1 80 aa12.7□□□□□ -0.38
SRPK1-210ENST00000508473 DEFB116Q30KQ4 102 aa12.69□□□□□ -0.38
SRPK1-210ENST00000508473 DSCR8Q96T75 97 aa12.69□□□□□ -0.38
SRPK1-210ENST00000508473 LOC105371267A0A1B0GV96 52 aa12.68□□□□□ -0.38
SRPK1-210ENST00000508473 BATFQ16520 125 aa12.68□□□□□ -0.38
SRPK1-210ENST00000508473 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
SRPK1-210ENST00000508473 LINC00472Q9H8W2 130 aa12.65□□□□□ -0.38
SRPK1-210ENST00000508473 A8MUU9 505 aa12.63□□□□□ -0.39
SRPK1-210ENST00000508473 MT1HP80294 61 aa12.63□□□□□ -0.39
SRPK1-210ENST00000508473 C9JAW5 83 aa12.62□□□□□ -0.39
SRPK1-210ENST00000508473 LINC00313P59037 77 aa12.61□□□□□ -0.39
SRPK1-210ENST00000508473 COX6B2Q6YFQ2 88 aa12.59□□□□□ -0.39
SRPK1-210ENST00000508473 NOTCH2NLQ7Z3S9 236 aa12.58□□□□□ -0.4
SRPK1-210ENST00000508473 LYRM7Q5U5X0 104 aa12.56□□□□□ -0.4
SRPK1-210ENST00000508473 IGHV6-1A0A0B4J1U7 121 aa12.55□□□□□ -0.4
SRPK1-210ENST00000508473 KRTAP16-1A8MUX0 517 aa12.53□□□□□ -0.4
SRPK1-210ENST00000508473 JMJD7-PLA2G4BH0Y9G9 81 aa12.53□□□□□ -0.4
SRPK1-210ENST00000508473 TRBV20-1A0A075B6N2 111 aa12.51□□□□□ -0.41
SRPK1-210ENST00000508473 Q6ZQT0 140 aa12.51□□□□□ -0.41
SRPK1-210ENST00000508473 C14orf132Q9NPU4 83 aa12.48□□□□□ -0.41
SRPK1-210ENST00000508473 LOC110117498A0A087WWA1 95 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms