RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CFC1P0CG37 223 aa11.12□□□□□ -0.63
SFXN1-209ENST00000508290 Q6ZQY7 126 aa11.12□□□□□ -0.63
SFXN1-209ENST00000508290 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
SFXN1-209ENST00000508290 HRCT1Q6UXD1 115 aa11.11□□□□□ -0.63
SFXN1-209ENST00000508290 H0YGX0 51 aa11.09□□□□□ -0.63
SFXN1-209ENST00000508290 CEND1Q8N111 149 aa11.09□□□□□ -0.63
SFXN1-209ENST00000508290 Q6JHZ5 121 aa11.08□□□□□ -0.64
SFXN1-209ENST00000508290 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
SFXN1-209ENST00000508290 PYY3Q5JQD4 70 aa11.07□□□□□ -0.64
SFXN1-209ENST00000508290 MUC2Q02817 5179 aa11.05□□□□□ -0.64
SFXN1-209ENST00000508290 IGLV8-61A0A075B6I0 122 aa11.05□□□□□ -0.64
SFXN1-209ENST00000508290 GHRHP01286 108 aa11.05□□□□□ -0.64
SFXN1-209ENST00000508290 PRO1854Q9UHT4 67 aa11.05□□□□□ -0.64
SFXN1-209ENST00000508290 SEC61BP60468 96 aaKnown RBP11.04□□□□□ -0.64
SFXN1-209ENST00000508290 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
SFXN1-209ENST00000508290 TCL1BO95988 128 aa11.03□□□□□ -0.64
SFXN1-209ENST00000508290 A0A1B0GX51 115 aa11.02□□□□□ -0.65
SFXN1-209ENST00000508290 CLEC2BQ92478 149 aa11.02□□□□□ -0.65
SFXN1-209ENST00000508290 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.65
SFXN1-209ENST00000508290 HSD52Q0P140 79 aa11.01□□□□□ -0.65
SFXN1-209ENST00000508290 XP32Q5T750 250 aa11.01□□□□□ -0.65
SFXN1-209ENST00000508290 TMA7Q9Y2S6 64 aaKnown RBP11.01□□□□□ -0.65
SFXN1-209ENST00000508290 MUC17Q685J3 4493 aa10.98□□□□□ -0.65
SFXN1-209ENST00000508290 FXYD2P54710 66 aa10.98□□□□□ -0.65
SFXN1-209ENST00000508290 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
SFXN1-209ENST00000508290 C1orf195Q5TG92 126 aa10.96□□□□□ -0.65
SFXN1-209ENST00000508290 A0A0G2JQZ4 141 aa10.94□□□□□ -0.66
SFXN1-209ENST00000508290 IGFL1Q6UW32 110 aa10.94□□□□□ -0.66
SFXN1-209ENST00000508290 TRBV7-7A0A0K0K1E9 115 aa10.93□□□□□ -0.66
SFXN1-209ENST00000508290 FAM218AQ96MZ4 157 aa10.91□□□□□ -0.66
SFXN1-209ENST00000508290 H3BQ85 93 aa10.9□□□□□ -0.66
SFXN1-209ENST00000508290 COX6CP09669 75 aa10.9□□□□□ -0.66
SFXN1-209ENST00000508290 TRIAP1O43715 76 aa10.89□□□□□ -0.67
SFXN1-209ENST00000508290 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
SFXN1-209ENST00000508290 DNAL4O96015 105 aa10.87□□□□□ -0.67
SFXN1-209ENST00000508290 Q6Q795 121 aa10.87□□□□□ -0.67
SFXN1-209ENST00000508290 PSMB2P49721 201 aa10.86□□□□□ -0.67
SFXN1-209ENST00000508290 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
SFXN1-209ENST00000508290 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
SFXN1-209ENST00000508290 H3BUT2 72 aa10.85□□□□□ -0.67
SFXN1-209ENST00000508290 FABP2P12104 132 aa10.83□□□□□ -0.68
SFXN1-209ENST00000508290 TEN1Q86WV5 123 aa10.83□□□□□ -0.68
SFXN1-209ENST00000508290 K7ERJ3 54 aa10.82□□□□□ -0.68
SFXN1-209ENST00000508290 H3BMG7 143 aa10.81□□□□□ -0.68
SFXN1-209ENST00000508290 ORMDL1Q9P0S3 153 aa10.81□□□□□ -0.68
SFXN1-209ENST00000508290 LST1O00453 97 aa10.8□□□□□ -0.68
SFXN1-209ENST00000508290 TMEM256-PLSCR3K7ERE1 68 aa10.78□□□□□ -0.68
SFXN1-209ENST00000508290 FAT4Q6V0I7 4981 aa10.77□□□□□ -0.69
SFXN1-209ENST00000508290 LCE2AQ5TA79 106 aaPredicted RBP10.76□□□□□ -0.69
SFXN1-209ENST00000508290 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
SFXN1-209ENST00000508290 TRACP01848 142 aa10.74□□□□□ -0.69
SFXN1-209ENST00000508290 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
SFXN1-209ENST00000508290 M0R143 59 aa10.73□□□□□ -0.69
SFXN1-209ENST00000508290 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
SFXN1-209ENST00000508290 KRTAP4-1Q9BYQ7 146 aa10.73□□□□□ -0.69
SFXN1-209ENST00000508290 SCGB1C2P0DMR2 95 aa10.71□□□□□ -0.69
SFXN1-209ENST00000508290 A0A087WSZ3 146 aa10.7□□□□□ -0.7
SFXN1-209ENST00000508290 UBE2V1Q13404 147 aa10.7□□□□□ -0.7
SFXN1-209ENST00000508290 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
SFXN1-209ENST00000508290 TRBV7-4A0A0J9YYF1 115 aa10.68□□□□□ -0.7
SFXN1-209ENST00000508290 A0A1W2PNM2 257 aa10.65□□□□□ -0.7
SFXN1-209ENST00000508290 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
SFXN1-209ENST00000508290 Q75L30 129 aa10.62□□□□□ -0.71
SFXN1-209ENST00000508290 TSTD3H0UI37 97 aa10.61□□□□□ -0.71
SFXN1-209ENST00000508290 CCKP06307 115 aa10.6□□□□□ -0.71
SFXN1-209ENST00000508290 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
SFXN1-209ENST00000508290 RBM3P98179 157 aaKnown RBP10.58□□□□□ -0.72
SFXN1-209ENST00000508290 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
SFXN1-209ENST00000508290 Q96NJ1 140 aa10.58□□□□□ -0.72
SFXN1-209ENST00000508290 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
SFXN1-209ENST00000508290 ATXN8Q156A1 80 aa10.57□□□□□ -0.72
SFXN1-209ENST00000508290 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
SFXN1-209ENST00000508290 A0A1B0GV72 72 aa10.56□□□□□ -0.72
SFXN1-209ENST00000508290 BAALC-AS2P0C853 105 aa10.55□□□□□ -0.72
SFXN1-209ENST00000508290 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
SFXN1-209ENST00000508290 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
SFXN1-209ENST00000508290 C20orf166-AS1Q96NR2 134 aa10.52□□□□□ -0.73
SFXN1-209ENST00000508290 IGKV4-1P06312 121 aa10.51□□□□□ -0.73
SFXN1-209ENST00000508290 C9JAW5 83 aa10.5□□□□□ -0.73
SFXN1-209ENST00000508290 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
SFXN1-209ENST00000508290 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
SFXN1-209ENST00000508290 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
SFXN1-209ENST00000508290 A8MUU9 505 aa10.48□□□□□ -0.73
SFXN1-209ENST00000508290 KRTAP19-2Q3LHN2 52 aa10.48□□□□□ -0.73
SFXN1-209ENST00000508290 LCE2CQ5TA81 110 aa10.48□□□□□ -0.73
SFXN1-209ENST00000508290 A0A1B0GW54 56 aa10.47□□□□□ -0.73
SFXN1-209ENST00000508290 VPS25Q9BRG1 176 aa10.47□□□□□ -0.73
SFXN1-209ENST00000508290 PDE6GP18545 87 aa10.46□□□□□ -0.73
SFXN1-209ENST00000508290 LINC00313P59037 77 aa10.46□□□□□ -0.73
SFXN1-209ENST00000508290 NAA38Q9BRA0 125 aaKnown RBP10.45□□□□□ -0.74
SFXN1-209ENST00000508290 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
SFXN1-209ENST00000508290 J3KT08 172 aa10.43□□□□□ -0.74
SFXN1-209ENST00000508290 DSCR10P59022 87 aa10.43□□□□□ -0.74
SFXN1-209ENST00000508290 LOC110117498A0A087WWA1 95 aa10.41□□□□□ -0.74
SFXN1-209ENST00000508290 BATFQ16520 125 aa10.41□□□□□ -0.74
SFXN1-209ENST00000508290 COX6B2Q6YFQ2 88 aa10.4□□□□□ -0.74
SFXN1-209ENST00000508290 Q6ZQT0 140 aa10.39□□□□□ -0.75
SFXN1-209ENST00000508290 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
SFXN1-209ENST00000508290 MT1HP80294 61 aa10.38□□□□□ -0.75
SFXN1-209ENST00000508290 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms