RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 MUSTN1Q8IVN3 82 aa9.16□□□□□ -0.94
CLDND1-217ENST00000508071 VAMP3Q15836 100 aa9.15□□□□□ -0.94
CLDND1-217ENST00000508071 LST1O00453 97 aa9.13□□□□□ -0.95
CLDND1-217ENST00000508071 Q6ZQY7 126 aa9.13□□□□□ -0.95
CLDND1-217ENST00000508071 COLCA2A8K830 154 aa9.12□□□□□ -0.95
CLDND1-217ENST00000508071 OCIAD2Q56VL3 154 aa9.12□□□□□ -0.95
CLDND1-217ENST00000508071 LINC00575Q6W349 94 aa9.12□□□□□ -0.95
CLDND1-217ENST00000508071 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
CLDND1-217ENST00000508071 MT2AP02795 61 aa9.11□□□□□ -0.95
CLDND1-217ENST00000508071 hADV29S1A0JD25 119 aa9.1□□□□□ -0.95
CLDND1-217ENST00000508071 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
CLDND1-217ENST00000508071 C3orf79P0CE67 100 aa9.09□□□□□ -0.95
CLDND1-217ENST00000508071 A8MUU9 505 aa9.07□□□□□ -0.96
CLDND1-217ENST00000508071 LCE2BO14633 110 aa9.07□□□□□ -0.96
CLDND1-217ENST00000508071 ANKRD39Q53RE8 183 aa9.07□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BKO60814 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BJP06899 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BOP23527 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BBP33778 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BDP58876 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BCP62807 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST2H2BEQ16778 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BHQ93079 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BNQ99877 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 HIST1H2BMQ99879 126 aa9.06□□□□□ -0.96
CLDND1-217ENST00000508071 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
CLDND1-217ENST00000508071 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
CLDND1-217ENST00000508071 KRTDAPP60985 99 aa9.05□□□□□ -0.96
CLDND1-217ENST00000508071 MT1FP04733 61 aa9.04□□□□□ -0.96
CLDND1-217ENST00000508071 SNHG12Q9BXW3 62 aa9.03□□□□□ -0.96
CLDND1-217ENST00000508071 SS18L2Q9UHA2 77 aa9.03□□□□□ -0.96
CLDND1-217ENST00000508071 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
CLDND1-217ENST00000508071 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-217ENST00000508071 H3BUT2 72 aa9.01□□□□□ -0.97
CLDND1-217ENST00000508071 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
CLDND1-217ENST00000508071 PPDPFLQ8WWR9 84 aa9.01□□□□□ -0.97
CLDND1-217ENST00000508071 KRTAP9-3Q9BYQ3 159 aa9.01□□□□□ -0.97
CLDND1-217ENST00000508071 MACF1Q9UPN3 7388 aaKnown RBP9.01□□□□□ -0.97
CLDND1-217ENST00000508071 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
CLDND1-217ENST00000508071 ATOH7Q8N100 152 aa9□□□□□ -0.97
CLDND1-217ENST00000508071 RBM12B-AS1Q9P1G2 102 aa8.96□□□□□ -0.98
CLDND1-217ENST00000508071 DSCR10P59022 87 aa8.95□□□□□ -0.98
CLDND1-217ENST00000508071 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
CLDND1-217ENST00000508071 BVES-AS1Q5T3Y7 98 aa8.93□□□□□ -0.98
CLDND1-217ENST00000508071 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
CLDND1-217ENST00000508071 A0A087WSZ3 146 aa8.91□□□□□ -0.98
CLDND1-217ENST00000508071 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
CLDND1-217ENST00000508071 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
CLDND1-217ENST00000508071 C12orf57Q99622 126 aa8.89□□□□□ -0.99
CLDND1-217ENST00000508071 HRES1P13985 223 aa8.88□□□□□ -0.99
CLDND1-217ENST00000508071 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
CLDND1-217ENST00000508071 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
CLDND1-217ENST00000508071 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
CLDND1-217ENST00000508071 LINC00313P59037 77 aa8.86□□□□□ -0.99
CLDND1-217ENST00000508071 SNCGO76070 127 aa8.84□□□□□ -0.99
CLDND1-217ENST00000508071 NDUFV3P56181 108 aaKnown RBP8.84□□□□□ -0.99
CLDND1-217ENST00000508071 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
CLDND1-217ENST00000508071 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
CLDND1-217ENST00000508071 HSBP1L1C9JCN9 74 aa8.79□□□□□ -1
CLDND1-217ENST00000508071 H3BMG7 143 aa8.79□□□□□ -1
CLDND1-217ENST00000508071 MTURNQ8N3F0 131 aa8.79□□□□□ -1
CLDND1-217ENST00000508071 IGKV4-1P06312 121 aa8.78□□□□□ -1
CLDND1-217ENST00000508071 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
CLDND1-217ENST00000508071 H0YGX0 51 aa8.75□□□□□ -1.01
CLDND1-217ENST00000508071 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
CLDND1-217ENST00000508071 GHRHP01286 108 aa8.73□□□□□ -1.01
CLDND1-217ENST00000508071 FABP2P12104 132 aa8.73□□□□□ -1.01
CLDND1-217ENST00000508071 FAM218AQ96MZ4 157 aa8.73□□□□□ -1.01
CLDND1-217ENST00000508071 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
CLDND1-217ENST00000508071 RAB37Q96AX2 223 aa8.7□□□□□ -1.02
CLDND1-217ENST00000508071 IGHV6-1A0A0B4J1U7 121 aa8.69□□□□□ -1.02
CLDND1-217ENST00000508071 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
CLDND1-217ENST00000508071 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
CLDND1-217ENST00000508071 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
CLDND1-217ENST00000508071 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
CLDND1-217ENST00000508071 A8MWP4 228 aa8.67□□□□□ -1.02
CLDND1-217ENST00000508071 ANKRD29Q8N6D5 301 aa8.67□□□□□ -1.02
CLDND1-217ENST00000508071 A0A1B0GX51 115 aa8.65□□□□□ -1.02
CLDND1-217ENST00000508071 LINC00472Q9H8W2 130 aa8.65□□□□□ -1.02
CLDND1-217ENST00000508071 A0A0B4J2C4 111 aa8.62□□□□□ -1.03
CLDND1-217ENST00000508071 S100A2P29034 98 aa8.62□□□□□ -1.03
CLDND1-217ENST00000508071 SPINK7P58062 85 aa8.62□□□□□ -1.03
CLDND1-217ENST00000508071 HIST1H2BLQ99880 126 aa8.62□□□□□ -1.03
CLDND1-217ENST00000508071 A0A1B0GV72 72 aa8.61□□□□□ -1.03
CLDND1-217ENST00000508071 COX8AP10176 69 aa8.61□□□□□ -1.03
CLDND1-217ENST00000508071 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
CLDND1-217ENST00000508071 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-217ENST00000508071 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
CLDND1-217ENST00000508071 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
CLDND1-217ENST00000508071 TRACP01848 142 aa8.58□□□□□ -1.04
CLDND1-217ENST00000508071 A0A1B0GVX0 72 aa8.57□□□□□ -1.04
CLDND1-217ENST00000508071 CCKP06307 115 aa8.57□□□□□ -1.04
CLDND1-217ENST00000508071 DLEU1O43261 78 aa8.56□□□□□ -1.04
CLDND1-217ENST00000508071 H3BQ85 93 aa8.54□□□□□ -1.04
CLDND1-217ENST00000508071 DNAL4O96015 105 aa8.54□□□□□ -1.04
CLDND1-217ENST00000508071 ORMDL1Q9P0S3 153 aa8.54□□□□□ -1.04
CLDND1-217ENST00000508071 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
CLDND1-217ENST00000508071 PRO1854Q9UHT4 67 aa8.53□□□□□ -1.04
CLDND1-217ENST00000508071 TRIAP1O43715 76 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms