RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 NREPQ16612 68 aa10.92□□□□□ -0.66
SFXN1-208ENST00000507823 LINC00476Q8WZB0 136 aa10.92□□□□□ -0.66
SFXN1-208ENST00000507823 F8WEM9 126 aa10.91□□□□□ -0.66
SFXN1-208ENST00000507823 C3orf84H3BNL1 204 aa10.9□□□□□ -0.66
SFXN1-208ENST00000507823 SERP2Q8N6R1 65 aa10.9□□□□□ -0.66
SFXN1-208ENST00000507823 CRYGAP11844 174 aa10.9□□□□□ -0.66
SFXN1-208ENST00000507823 WWC2-AS2Q96NR7 200 aa10.89□□□□□ -0.67
SFXN1-208ENST00000507823 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
SFXN1-208ENST00000507823 UBE2AP49459 152 aa10.89□□□□□ -0.67
SFXN1-208ENST00000507823 IGFL1Q6UW32 110 aa10.88□□□□□ -0.67
SFXN1-208ENST00000507823 LY6G6CO95867 125 aa10.87□□□□□ -0.67
SFXN1-208ENST00000507823 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
SFXN1-208ENST00000507823 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
SFXN1-208ENST00000507823 DNAH8Q96JB1 4490 aa10.85□□□□□ -0.67
SFXN1-208ENST00000507823 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
SFXN1-208ENST00000507823 BPY2O14599 106 aa10.84□□□□□ -0.67
SFXN1-208ENST00000507823 IGKV4-1P06312 121 aa10.84□□□□□ -0.67
SFXN1-208ENST00000507823 FRAS1Q86XX4 4008 aa10.83□□□□□ -0.68
SFXN1-208ENST00000507823 DNAH11Q96DT5 4516 aa10.83□□□□□ -0.68
SFXN1-208ENST00000507823 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
SFXN1-208ENST00000507823 TGP01266 2768 aa10.81□□□□□ -0.68
SFXN1-208ENST00000507823 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
SFXN1-208ENST00000507823 DNAH5Q8TE73 4624 aa10.8□□□□□ -0.68
SFXN1-208ENST00000507823 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
SFXN1-208ENST00000507823 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
SFXN1-208ENST00000507823 PSORS1C2Q9UIG4 136 aa10.78□□□□□ -0.68
SFXN1-208ENST00000507823 A0A0G2JQZ4 141 aa10.77□□□□□ -0.69
SFXN1-208ENST00000507823 Q8N9L7 120 aa10.76□□□□□ -0.69
SFXN1-208ENST00000507823 DSCR10P59022 87 aa10.74□□□□□ -0.69
SFXN1-208ENST00000507823 SRRM2Q9UQ35 2752 aaKnown RBP10.74□□□□□ -0.69
SFXN1-208ENST00000507823 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
SFXN1-208ENST00000507823 ZNF706Q9Y5V0 76 aaPredicted RBP10.72□□□□□ -0.69
SFXN1-208ENST00000507823 FAT2Q9NYQ8 4349 aa10.72□□□□□ -0.69
SFXN1-208ENST00000507823 ZNF861PO60384 105 aa10.71□□□□□ -0.69
SFXN1-208ENST00000507823 RPL37AP61513 92 aaKnown RBP10.71□□□□□ -0.69
SFXN1-208ENST00000507823 A0A087WSZ3 146 aa10.71□□□□□ -0.7
SFXN1-208ENST00000507823 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
SFXN1-208ENST00000507823 CYSTM1Q9H1C7 97 aa10.69□□□□□ -0.7
SFXN1-208ENST00000507823 HYDINQ4G0P3 5121 aa10.69□□□□□ -0.7
SFXN1-208ENST00000507823 PKD1P98161 4303 aa10.68□□□□□ -0.7
SFXN1-208ENST00000507823 Q6ZSA8 131 aa10.67□□□□□ -0.7
SFXN1-208ENST00000507823 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
SFXN1-208ENST00000507823 K7EQZ3 153 aa10.65□□□□□ -0.71
SFXN1-208ENST00000507823 FAM30AQ9NZY2 134 aa10.64□□□□□ -0.71
SFXN1-208ENST00000507823 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
SFXN1-208ENST00000507823 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
SFXN1-208ENST00000507823 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
SFXN1-208ENST00000507823 CIRBP-AS1Q8TBR5 109 aa10.62□□□□□ -0.71
SFXN1-208ENST00000507823 C20orf197Q8N268 126 aa10.61□□□□□ -0.71
SFXN1-208ENST00000507823 TMEM258P61165 79 aa10.6□□□□□ -0.71
SFXN1-208ENST00000507823 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
SFXN1-208ENST00000507823 IGLV9-49A0A0B4J1Y8 123 aa10.58□□□□□ -0.72
SFXN1-208ENST00000507823 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
SFXN1-208ENST00000507823 HCG22E2RYF7 251 aa10.56□□□□□ -0.72
SFXN1-208ENST00000507823 DEFB116Q30KQ4 102 aa10.56□□□□□ -0.72
SFXN1-208ENST00000507823 LCE6AA0A183 80 aa10.54□□□□□ -0.72
SFXN1-208ENST00000507823 J3KT08 172 aa10.54□□□□□ -0.72
SFXN1-208ENST00000507823 A8MWP4 228 aa10.54□□□□□ -0.72
SFXN1-208ENST00000507823 PRR15Q8IV56 129 aa10.54□□□□□ -0.72
SFXN1-208ENST00000507823 MOBPQ13875 183 aa10.53□□□□□ -0.72
SFXN1-208ENST00000507823 Q96NJ1 140 aa10.53□□□□□ -0.72
SFXN1-208ENST00000507823 LRP1BQ9NZR2 4599 aa10.52□□□□□ -0.72
SFXN1-208ENST00000507823 H7BZZ5 65 aa10.52□□□□□ -0.73
SFXN1-208ENST00000507823 KRTAP29-1A8MX34 341 aaPredicted RBP10.51□□□□□ -0.73
SFXN1-208ENST00000507823 TMEM254Q8TBM7 123 aa10.51□□□□□ -0.73
SFXN1-208ENST00000507823 ANAPC11Q9NYG5 84 aa10.51□□□□□ -0.73
SFXN1-208ENST00000507823 A0A0U1RQV1 116 aa10.49□□□□□ -0.73
SFXN1-208ENST00000507823 NDUFC1O43677 76 aa10.49□□□□□ -0.73
SFXN1-208ENST00000507823 SNURFQ9Y675 71 aa10.48□□□□□ -0.73
SFXN1-208ENST00000507823 RPS28P62857 69 aaKnown RBP10.46□□□□□ -0.74
SFXN1-208ENST00000507823 CD164Q04900 197 aa10.45□□□□□ -0.74
SFXN1-208ENST00000507823 SSBP3-AS1Q7Z2R9 100 aa10.44□□□□□ -0.74
SFXN1-208ENST00000507823 WFDC13Q8IUB5 93 aa10.42□□□□□ -0.74
SFXN1-208ENST00000507823 HRCT1Q6UXD1 115 aa10.41□□□□□ -0.74
SFXN1-208ENST00000507823 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
SFXN1-208ENST00000507823 LINC00336Q6ZUF6 198 aa10.41□□□□□ -0.74
SFXN1-208ENST00000507823 MMP24-AS1A0A0U1RRL7 71 aa10.4□□□□□ -0.74
SFXN1-208ENST00000507823 ASB16-AS1Q495Z4 193 aa10.4□□□□□ -0.74
SFXN1-208ENST00000507823 C5orf47Q569G3 176 aa10.4□□□□□ -0.74
SFXN1-208ENST00000507823 NDUFB1O75438 58 aa10.4□□□□□ -0.74
SFXN1-208ENST00000507823 FAM229BQ4G0N7 80 aa10.4□□□□□ -0.74
SFXN1-208ENST00000507823 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
SFXN1-208ENST00000507823 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
SFXN1-208ENST00000507823 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
SFXN1-208ENST00000507823 VPS13BQ7Z7G8 4022 aa10.38□□□□□ -0.75
SFXN1-208ENST00000507823 PKHD1P08F94 4074 aa10.34□□□□□ -0.75
SFXN1-208ENST00000507823 DYNC1H1Q14204 4646 aaKnown RBP10.34□□□□□ -0.75
SFXN1-208ENST00000507823 A0A1B0GVX0 72 aa10.34□□□□□ -0.75
SFXN1-208ENST00000507823 KRTAP1-4P0C5Y4 121 aa10.34□□□□□ -0.75
SFXN1-208ENST00000507823 ATP5EP56381 51 aaPredicted RBP10.34□□□□□ -0.75
SFXN1-208ENST00000507823 KRTAP13-2Q52LG2 175 aa10.34□□□□□ -0.75
SFXN1-208ENST00000507823 A0A087X002 238 aa10.33□□□□□ -0.76
SFXN1-208ENST00000507823 A0A1B0GVY2 172 aa10.33□□□□□ -0.76
SFXN1-208ENST00000507823 C8orf17Q9NRJ1 99 aa10.32□□□□□ -0.76
SFXN1-208ENST00000507823 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
SFXN1-208ENST00000507823 Q5XG85 94 aa10.31□□□□□ -0.76
SFXN1-208ENST00000507823 RYR2Q92736 4967 aa10.3□□□□□ -0.76
SFXN1-208ENST00000507823 H3BPC8 53 aa10.28□□□□□ -0.76
SFXN1-208ENST00000507823 OXTP01178 125 aa10.28□□□□□ -0.76
SFXN1-208ENST00000507823 SERP1Q9Y6X1 66 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms